prot_L-elsbetiae_contig6148.14718.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6148.14718.1
Unique Nameprot_L-elsbetiae_contig6148.14718.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length765
Homology
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BLAST of mRNA_L-elsbetiae_contig6148.14718.1 vs. uniprot
Match: A0A6H5L1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V4_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 3.990e-152
Identity = 476/788 (60.41%), Postives = 517/788 (65.61%), Query Frame = 0 
Query:    1 MCRFLRGLALLSQGDLESAAGRLEESLDLDPRGRHSAVCLAHVSCFASAAAATDGTEDSPPPSVSRTRELLRLLELGSSAHLESVEQERLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAWILLACVARARGDAGGAVSMFRRALALDPECLEAVYGVARVLQESGDHTASRQLLLFLGERSQEISRGGSVAGXXXXXXRRTGNKSGSRSP-HDRRLRFPLDNDGERRPSSSRGRQQDSDGSWXXXXXXXXXXXXXXXXXXVLPPAAPAEVMWRVARASMAARDWGAAALALGALVASEASGKSERRPEAVQRLYYASFAGAGRGVCSASRGPGRARVLRALAFCQIQRGLYRDALDTVNAVLGRGGXXXXXXXXXXXAM--------------LMLQADALLCLEDGEAVVESSLDRAAQLLSRRQIDMSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKKPNAQEPRAGRGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAATPRDRAVDRDRRLARSAAFNNRAVLLAAAGRGEEACRLLRACLLLLPEEPRPVFNLALALWRLGRRRAACVHWLGARNWLGDAGGDXXXXXXXXXKGDGGRDSVEGFTKLLDAARRRKALLKADAXXXXXXXXXXXXXXXXXXXXXXASFSYPSSFAP--ASHVTEGQGGDPLSLPPIQLCLLDIRCLTWWLGNGLGVDGD-------GCAADGLRGPRGTGFRSLLR 764
            MCRFLRGL  L+QGDLE+AAGRLEESLDLDPR RH+ VCLAH+SCFASA+ AT  T     PS  RT ELLR+L LGSSAH +S+EQE L                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAW+LLAC ARA G+AG AVSMFRRALALDP+CLEAVYGVARVLQESGDH ASR+LLLFLGERSQE+S G   +          G ++ SRS  H  RL FPL+            RQ    G  XXXXXXXXXXXX      VLP A  AEVMWRVARASMAARDW  A LAL  LVA+EA+   E  P      Y+ASFA  G G  ++ RGPGRARVLRALA+ QIQRGLYRDAL+TV  VLG G  XXXXXXXXXX                LML+ADALLCLE+ E     SLDRA +LL+RRQ+D+S+P     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 XXXXXXXXXXXXXXXXXXXX               LAR+AAFNNRAVLL A GRGEEACRLLRACLLLLPEEPRP FN +LALWRLGRRR AC HWL AR WLG  GG                   E + KLL++ARRRK  L++DA             XXXXXXXXX              SHVTEG GGDPLSLP IQ+CLLDIRCLTWWL N LGV+ +         AA G  G RG G RS LR
Sbjct:  392 MCRFLRGLGSLAQGDLEAAAGRLEESLDLDPRNRHATVCLAHISCFASASPAT--TSLRWKPSDERTHELLRVLSLGSSAHFDSIEQEIL-------------LRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAWLLLACAARATGNAGEAVSMFRRALALDPQCLEAVYGVARVLQESGDHAASRELLLFLGERSQELSGGSLPSSNGATSAVHQGRRNSSRSSSHQHRLCFPLE----------ARRQGFQPGGXXXXXXXXXXXXXASGALTVLPVAL-AEVMWRVARASMAARDWPTAILALEGLVAAEATAGGEASPREGLAYYFASFAKGG-GARASRRGPGRARVLRALAYSQIQRGLYRDALETVGTVLGDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXLMLRADALLCLEEDETCAGDSLDRALRLLARRQVDLSVPPPSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARAAAFNNRAVLLIAFGRGEEACRLLRACLLLLPEEPRPTFNFSLALWRLGRRRDACAHWLEARRWLGVGGGRR-----------------EAYVKLLESARRRKLSLQSDAVNKANKTGGHGDSXXXXXXXXXXXXXXXXXXXXXVTSHVTEGSGGDPLSLPQIQVCLLDIRCLTWWLDNNLGVEDEEQALGPAAAAAGGSHGSRG-GLRSRLR 1102
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BLAST of mRNA_L-elsbetiae_contig6148.14718.1 vs. uniprot
Match: D7FTU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU3_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 6.310e-93
Identity = 232/384 (60.42%), Postives = 259/384 (67.45%), Query Frame = 0 
Query:    1 MCRFLRGLALLSQGDLESAAGRLEESLDLDPRGRHSAVCLAHVSCFASAAAATDGTEDSPPPSVSRTRELLRLLELGSSAHLESVEQERLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAWILLACVARARGDAGGAVSMFRRALALDPECLEAVYGVARVLQESGDHTASRQLLLFLGERSQEISRGGSVAGXXXXXXRRTGNKSGSRSP-HDRRLRFPLDNDGERRPSSSRGRQQDSDGSWXXXXXXXXXXXXXXXXXXVLPPAAPAEVMWRVARASMAARDWGAAALALGALVASEASGKSERRPEAVQRLYYASFAGAGRGVCSASRGPGRARVLRALAFCQIQRGLYRDALDTVNAVLGRG 383
            MCRFLRGL  L+QGDLE+AAGRLEESLDLDPR RH+ VCLAH+SCFASA+ AT  T     PS  RT ELLR+L LGSSAH +S+EQE L              XXXXXXXXXXXXXXXX         XXXXXXVEAW+LLAC ARA G+AG AVSMFRRALALDP+CLEAVYGVARVLQESGDH ASR+LLLFLGERSQE+S G S +          G +S SRS  H  RL FPL+       ++ +G Q    G  XXX               V+ P APAEVMWRVARASMAA+DW  A LAL  LVA+EA+             Y+ASFA  G G  ++ RGPGRARVLRALAF QIQRGLYRDAL+TV  VLG G
Sbjct:  372 MCRFLRGLGSLAQGDLEAAAGRLEESLDLDPRNRHATVCLAHISCFASASPATTTTSLGWEPSDERTHELLRVLSLGSSAHFDSIEQEIL-----------LRGXXXXXXXXXXXXXXXXEAGRCMWRAXXXXXXVEAWVLLACAARATGNAGEAVSMFRRALALDPQCLEAVYGVARVLQESGDHAASRELLLFLGERSQELSGGSSPSSNGATSAVHQGRRSSSRSSSHQHRLCFPLE-------ATRQGFQPSGGGXXXXXGAL------------VVLPVAPAEVMWRVARASMAAKDWPTAILALEGLVAAEATADGVASSREGLAYYFASFAKDG-GARASRRGPGRARVLRALAFSQIQRGLYRDALETVRMVLGDG 724
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6148.14718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1V4_9PHAE3.990e-15260.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU3_ECTSI6.310e-9360.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 561..594
e-value: 26.0
score: 11.4
coord: 353..386
e-value: 410.0
score: 0.7
coord: 1..33
e-value: 200.0
score: 3.4
coord: 136..169
e-value: 0.015
score: 24.5
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 137..169
e-value: 0.021
score: 15.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 136..169
score: 9.204
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 5..33
score: 5.576
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 561..594
score: 5.546
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 542..628
e-value: 4.0E-6
score: 28.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..619
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 561..594
score: 6.566
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 136..169
score: 9.395
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..33
score: 8.452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6148contigL-elsbetiae_contig6148:1532..8995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6148.14718.1mRNA_L-elsbetiae_contig6148.14718.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6148 145..10282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6148.14718.1 ID=prot_L-elsbetiae_contig6148.14718.1|Name=mRNA_L-elsbetiae_contig6148.14718.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=765bp
MCRFLRGLALLSQGDLESAAGRLEESLDLDPRGRHSAVCLAHVSCFASAA
AATDGTEDSPPPSVSRTRELLRLLELGSSAHLESVEQERLRRRAGGSAAT
AAAAAAAAAAAGPGRGRTTRTEEEGGSGGAAGGGGVEAWILLACVARARG
DAGGAVSMFRRALALDPECLEAVYGVARVLQESGDHTASRQLLLFLGERS
QEISRGGSVAGGGGGGGRRTGNKSGSRSPHDRRLRFPLDNDGERRPSSSR
GRQQDSDGSWEGGGGVGLAPAAAAAAAAVLPPAAPAEVMWRVARASMAAR
DWGAAALALGALVASEASGKSERRPEAVQRLYYASFAGAGRGVCSASRGP
GRARVLRALAFCQIQRGLYRDALDTVNAVLGRGGGGGAAEGEEDAAMLML
QADALLCLEDGEAVVESSLDRAAQLLSRRQIDMSLPPPTPSSSLSSSAAA
AAAAAAAVSPPPTRKTTAVAAAAADVAAAWPTTPPPPPGKRKKPNAQEPR
AGRGSAAAAASAASAALAVAAAGDGDAAGAGAGADNNNNGTGEAATPRDR
AVDRDRRLARSAAFNNRAVLLAAAGRGEEACRLLRACLLLLPEEPRPVFN
LALALWRLGRRRAACVHWLGARNWLGDAGGDAGGGGGGGSKGDGGRDSVE
GFTKLLDAARRRKALLKADAAERPKKASGGRKTSSPSSSAAAASFSYPSS
FAPASHVTEGQGGDPLSLPPIQLCLLDIRCLTWWLGNGLGVDGDGCAADG
LRGPRGTGFRSLLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom