prot_L-elsbetiae_contig6135.14702.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6135.14702.1
Unique Nameprot_L-elsbetiae_contig6135.14702.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1430
Homology
BLAST of mRNA_L-elsbetiae_contig6135.14702.1 vs. uniprot
Match: A0A6H5KLQ2_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ2_9PHAE)

HSP 1 Score: 1001 bits (2587), Expect = 0.000e+0
Identity = 750/1490 (50.34%), Postives = 871/1490 (58.46%), Query Frame = 0
Query:   39 RTISNRATCPATAGSPTQRDVPYDIGECVIHSSFPPAPPPRALELVKEEVHRALEAFSTRPLKGETSARCPADLLRPFDVSRDGRVTYHEFQAGMLGLGIALTNHEAGALARAVDREDSGLVDRGRFEAAATQDWGQGG---GECEEATSAPERFEGDCPEEQ--------QQQAGSRNGTNDASCARIGDNQYADGEERIAPXXXXXRSESPNLVRQASTSELATTSSRVRSPPTVSFDHWQRHRTTIRGAGSEDNEVTA--PVATALSATRDGSRKNSSNSDHCETANKSNSXXXXXXXXXXXXXDKRPL------PQKRVNSLNTLRSLLRQDGVFDYADTANNGDYRRHSSFDSGSGGWERRGRRPQQQEQSHSRRLHEDQRGLRTARGGDGGGGELRRNSGNVEHRHPRDESAPAFGSSYAGPKRGHVGFNRGGRRQSKD--GTGGGHAVA---EAQNLERRRQAIATRAESILRLRSRGDLVGLRRAMSKADPSASGVVSQREMEQVVLRRFGTGLGNDEASELAARYRKEFNGRSMVDYDRLFDSLDAKEAGLFDQAVAPSSSTPPYSGHGCERGRXXXXXXXQRQPQQRLLSRDSSGTDKRRPASTAAVAGSRRRGSSLAPPAAGARTRYRQRRCNRRGVPKCNAPAEELAGGTVPAEDSQLVRRARAKTLALLDRHGTRSVDCVFGLVDPAQTQSISSGELREGLRILGGSDTLSEIEHQALFRDICKGHDRIKYR---------------------------------------ELLDTLRMAEAAENRERTQRKLAHQAGLPTSDRGSASHWCHSDVLDWDVPPAGGG-RGDPSEVGLTGGRQHKESRRQALVFERLRESVRQIQKGRNSAGPVFDMFQQGGRGRGEARKNGTAASYAGG------------NDDKDPDDDQRIPPPLSPAALRAGLGSLGVPLGDKDFIALMATTDPEQRGEVSYPTFCEALKLHRLRG--------GNGGE-----------PAAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------AMELVPPPDAHTDLEGGVFHLNPATHGCANPNFTTSMIPA--GGRDGRGAQQSRADTYRPKRRQS-----GGNAF---MKAHEQTLLVVGDG--DRAGRWNETGAEAERRFCRSLGGKMRRSKSLSSCYARGRGGWDNLGTPSLRGGAPSPSPSTTSAAAATWADTNASIITDGSGNRRGRCHIPRNSDLGFGSERMRSQLSGDGDQDHRRRGGRR-----------SSSGGVADAGSRRTRSLSLGAERRYGNWARSSVQHLLRQDGWLGVRSPRPTGPSSTTGEPSS---GYSSE---GKGQHRRRAAAETAVQQTARPRSSPGRRVSNRNNFSDGFVVLNSARHPAQTRERRPSPYATDADFSSATAPLLARATRGVAGRPLDNFSRTHPRAVADVRARNSEPEDWGGTITGGGGKAG--GEFSSTLRWG 1393
            R ISN+ATC   AGSPT+RDVPYD+GEC+IHS+ PP PPPRALELVKEEVHRAL+AFST+P+KGE  A  P+DLLRPFDVS+DGRVTY EF+ G+LGLGI LT HEA ALA+ VDRE +GLVDRG FEAAAT+DWG  G   G     TSAP    G   E Q          +  S    +D S  R G+  YA GE    P      SE+P  +RQ S  E     SR R P T+SFD WQ++      + +  + V A  P +T  S    G    + N  H  + + S  XXXXXXXXXXX  D           QK + SL TLRSLL++DGVFD   +    D    S+  S S G E RGRR +++ Q  S    + Q G R + GG GG G+ R +   VEHR  R+E   A                            TG  + V    EA +   R QA+A RAE IL+LRSRGDLVGLRRA+SKADPSASGV+S+REME+V+LRRFGTGL +DEA  LAA YRK+FNGRSMVDY RLFD+++ +E G++ + V PS      SG GC             + QQ   SRD  G  + R AS +A    RRRGS     AAG RTR+ QRR  RRGVP  +A  +    G  PAE SQLVRRARAKTLALLDRHGTRSVDCVFGLVD A TQ+++SGELRE LRILGGSDTLSEIEH+ALF+ I KG DRI YR                                       ELLDTLR +E AE+RERTQRKL HQAGLPTS RGSA HW HSDVLDWD PPAGGG R     VGL GGRQHKESRRQALVF+RLR+ V+QIQ+ +NSA PVFDMF+Q    RG AR  G   + A              N+D DPD   R P PLSP+ALRAGLGSLGVPLGD+DF  L+A TDP++RG+VSYPTFCEAL LH LRG         +G E           P   R     XXXXXXXXXXXXXXXXXXXXXXX         AMEL PP DA  DLEGGVFH+N AT GCANPNFTT+M+PA  GG       + R D+YRPKRRQS     GG       K+H QTLLVVG G  DR G  ++TG EAERRF + LG KMR                                          W+D N    T G G+RRGR H PR+SDLGFGSERMRS    D D+D R  GGRR           + + G    G RR RSLSLGAERRYG+WARSSVQHLLRQDGWLG RS R   PS  TG  ++   G+SSE   G+G+ R    AETA +   R RSSP R +S   N +DG V +N+ R+ AQTRERRP+PYATDAD SS    +           P    + +H                W    TGG    G  G+FS TLRWG
Sbjct:   48 RQISNQATCSTAAGSPTRRDVPYDVGECIIHSAPPPVPPPRALELVKEEVHRALKAFSTKPVKGEPKAPLPSDLLRPFDVSKDGRVTYREFRTGILGLGIGLTAHEAEALAQVVDREGTGLVDRGPFEAAATRDWGSSGRDGGWQGRPTSAPGSVPGAVAEPQIGGGALHSPGEHTSHPQVDDGSIVRDGEKGYAGGEVLPPPPTP---SEAPEPLRQWSRLETTGRPSRNRGPSTLSFDCWQQNANRRNESNNAADAVVAKTPASTGSSI---GRSDGNVNGHHKHSRDTSTXXXXXXXXXXXXNSDYNTHNNNLQPSQKYLQSLQTLRSLLQRDGVFDEVKSTPIADETNKSNERSLSFGTEIRGRRRERRLQEQS----QHQAGSRLS-GGGGGDGKQRVDLSRVEHRRSREEDCRADSPXXXXXXXXXXXXXXXXXXXXXXXXSTGKTNVVVSDTEAPDHLARAQAVAARAEKILQLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDDEARHLAACYRKDFNGRSMVDYGRLFDNMEVQEGGVYGRGVTPSPGPSKSSGRGCW------------EDQQHSSSRDGGGGTRARSASVSAAGEXRRRGSRPMRAAAGGRTRHSQRRYWRRGVP--DAADDNFVRGGAPAEASQLVRRARAKTLALLDRHGTRSVDCVFGLVDQAHTQTVNSGELREALRILGGSDTLSEIEHRALFKGISKGRDRIHYRDKTYPNTQRYSRGPAASVVATTCFIYTLFFGTPLVLHKQELLDTLRASEVAEHRERTQRKLQHQAGLPTSGRGSAIHWRHSDVLDWDAPPAGGGGRKGSRGVGLKGGRQHKESRRQALVFQRLRDGVKQIQEKQNSAWPVFDMFRQ----RGRARAGGYCDAAAXXXXXXXXXXXXTINNDDDPD---RTPSPLSPSALRAGLGSLGVPLGDEDFDTLIAATDPDRRGKVSYPTFCEALDLHPLRGDPPDAHRTASGSEEEERPSSAPPVPTKSRQHNRQXXXXXXXXXXXXXXXXXXXXXXXXXGGYIRRRAMELAPPADAREDLEGGVFHVNEATCGCANPNFTTTMVPASTGGGCRANNNRPRPDSYRPKRRQSPAPAPGGTLTGVRTKSHGQTLLVVGSGGGDRVGLRDQTGLEAERRFRQGLGIKMR-----------------------------------------AWSDDN---NTGGRGHRRGRSHTPRDSDLGFGSERMRSTSRCDDDEDCRGGGGRRERRSGSVGWRRTGTNGDVGPGLRRVRSLSLGAERRYGDWARSSVQHLLRQDGWLGARSFRLDPPSPVTGSRNTAGGGHSSEQHGGRGKSRW-PRAETAFEMR-RSRSSP-RDLSQHKNSADGSV-MNNRRYSAQTRERRPTPYATDADLSSVCRVM-----------PAATAATSHSAVALTTEGYGR----WRKEATGGSRSGGERGDFSPTLRWG 1442          
BLAST of mRNA_L-elsbetiae_contig6135.14702.1 vs. uniprot
Match: D8LB86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB86_ECTSI)

HSP 1 Score: 914 bits (2361), Expect = 2.430e-307
Identity = 636/1284 (49.53%), Postives = 746/1284 (58.10%), Query Frame = 0
Query:    4 TLDRIPQLMHELHNQR-----ASDFTSSYRDQHLTQIERQRTISNRATCPATAGSPTQRDVPYDIGECVIHSSFPPAPPPRALELVKEEVHRALEAFSTRPLKGETSARCPADLLRPFDVSRDGRVTYHEFQAGMLGLGIALTNHEAGALARAVDREDSGLVDRGRFEAAATQDWGQGGGECE----EATSAPERFEGDCPEEQQQQAGSRNGTNDASCARIGDNQYA-DGEERIAPXXXXXR----SESPNLVRQASTSELATTSSRVRSPPTVSFDHWQRHRTTIRGAGSEDNEVTAPVATALSATRDGSRK-----------------------NSSNSDHCETANKSNSXXXXXXXXXXXXXDKRPLPQKRVNSLNTLRSLLRQDGVFDYADTANNGDYRRHSSFDSGSGGWERRGRRPQQQEQSHSRRLHEDQRGLRTARGGDG------GGGELRRNSGNVEHRHPRDESAPAFGSSYAGPKRGHVGFNRGGRRQSKDGTGGGHAVAEAQNLER-----RRQAIATRAESILRLRSRGDLVGLRRAMSKADPSASGVVSQREMEQVVLRRFGTGLGNDEASELAARYRKEFNGRSMVDYDRLFDSLDAKEAGLFDQAVAPSSSTPPYSGHGCERGRXXXXXXXQRQPQQRLLSRDSSGTDKRRPASTAAVAGSRRRGSSLAPPAAGARTRYRQRRCNRRGVPKCNAPAEELAGGTVPAEDSQLVRRARAKTLALLDRHGTRSVDCVFGLVDPAQTQSISSGELREGLRILGGSDTLSEIEHQALFRDICKGHDRIKYRELLDTLRMAEAAENRERTQRKLAHQAGLPTSDRGSASHWCHSDVLDWDVPPAGGG-RGDPSEVGLTGGRQHKESRRQALVFERLRESVRQIQKGRNSAGPVFDMFQQGGRGR----GEARKNGTAASYAGGNDDKDPDDDQRIPPPLSPAALRAGLGSLGVPLGDKDFIALMATTDPEQRGEVSYPTFCEALKLHRLRG--------GNGGEPAAQ-----------------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMELVPPPDAHTDLEGGVFHLNPATHGCANPNFTTSMIPA--GGRDGRGAQQSRADTYRPKRRQS-----GGNAF---MKAHEQTLLVVGDG--DRAGRWNETGAEAERRFCRSLGGKMRRSKSLSSCYARGRGGWDNLGTPSLRGGAPSPSPSTTSAAAATWADTNASIITDGSGNRRGRCHIPRNSDLGFGSERMRSQLSGDGDQDHRRR 1191
            TLD+IP+LMH+LHN       ++  TSSYRDQ+LT+ E+QR ISN+ TC   AGSPT RDVPYDIGE +IHS+ PP PPPRALELVKEEVHRAL+AFST+P+KGE  A  P+DLLRPFDVS+DGRVTY E + G+LGLGI LT  EA  LA+ VDRE +GLVDRG FEAAAT+DWG GGG         TSAP R  G   E Q +     +    AS  ++ D + A DGE+  A           SE+P  +RQ S SE     SR   P T+SFD+WQ++      + +  N V                                         SSNSD+  T N                 + + L QK + SL TLRSLL+ D VFD   +    D     +  S S G E RGRR +++ Q  S    + Q GLR +           G G+ R +S  VEHR  R+E   A                             G+      + E      R +++A RAESILRLRSRGDLVGLRRA+SKADPSASGV+S+REME+V+LRRFGTGL + EA  LAARYRK+FNGRSMVDY RLFDSL+ KE  LF + V  S      SG GC             + QQR  S         R A T+     RRRGS     AAGARTR+ QRR  RRGVP  +A A +   G  PAE+SQLVRRARAKTLALLDRHGT SVDCVFGLVD A TQ++SSGELRE LRILGGSDTLSEIEH+ALF+ I KG DR+ YRELLDTLR +E AE+RERTQRKL HQAGLPTS RGSA HW HSDVLDWD PPAGGG R     VGL GGRQHKESRRQALVF+RLR+ VRQIQ+ +NSAGPVFDMF++ GRGR     +A     A + +G     + +D  R PPPLSP+ALRAGLGSLGVPLG++DF+ L+A TDP++RGEV+YPTFCEAL LH LRG         +G E   +                        XXXXXXXXX           XX      AMEL PP D   DLEGGVFH+N AT+GC NPNFTT+M+PA  GG         R D YRPKRRQS     GG       K+H QTLLVVG G  DR G  ++TG EAERRF + LG KMR                DN   P+                          ++  G GNRRGR H PR+SDLGFGSERMRS  S DG   H RR
Sbjct:   47 TLDQIPRLMHKLHNYNNERTGSTRVTSSYRDQYLTRKEQQR-ISNQVTCSTAAGSPTHRDVPYDIGEYIIHSAPPPVPPPRALELVKEEVHRALKAFSTQPVKGEPKAPLPSDLLRPFDVSKDGRVTYRELRTGILGLGIGLTAREAEELAQVVDREGTGLVDRGHFEAAATRDWGSGGGGDGGWQGRPTSAPGRVXGAVAESQSESGALHSPGEHASHPQVDDGRIAHDGEKGCAGGEVLPPPPTPSEAPEPLRQWSRSETTGRPSRNHGPSTLSFDYWQQNANRRNDSNNAANAVVTNTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKSSNSDY-NTHN-----------------NNQQLSQKYIQSLQTLRSLLQLDRVFDEVKSTPIADETNKPNRRSLSFGTETRGRRCERRRQEQS----QHQSGLRPSGXXXXXXSCGVGDGKQRVDSTKVEHRRFREEDGRADSPXXXXXXXXXXXXXXXXXXXXXXXXXTGNTSVVVSDTEAPDHLARARSVAARAESILRLRSRGDLVGLRRAVSKADPSASGVISRREMERVILRRFGTGLEDHEARHLAARYRKDFNGRSMVDYGRLFDSLEVKEGDLFGRGVTSSPGPSTSSGRGCW------------EAQQRSSSXXXXXXXXARSAPTSTAGEGRRRGSRPMRAAAGARTRHSQRRYWRRGVP--DAAAADFVRGGAPAEESQLVRRARAKTLALLDRHGTPSVDCVFGLVDQAHTQTVSSGELREALRILGGSDTLSEIEHRALFKGISKGRDRVLYRELLDTLRASEVAEHRERTQRKLQHQAGLPTSGRGSAIHWRHSDVLDWDAPPAGGGDRKGSCGVGLKGGRQHKESRRQALVFQRLRDGVRQIQEKQNSAGPVFDMFRRRGRGRTGGYSDAAATVAAPTTSGNGTMNNDNDPVRTPPPLSPSALRAGLGSLGVPLGNEDFVTLIAATDPDRRGEVTYPTFCEALDLHPLRGDPSDAHRTASGSEEQERPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDAGKGRREGXXGYARRRAMELAPPADTREDLEGGVFHVNEATYGCDNPNFTTTMVPASIGGGCKANNNHPRPDAYRPKRRQSPAPAPGGTLTGIRTKSHGQTLLVVGSGGGDRVGLRDQTGLEAERRFRQGLGVKMRAWSG------------DNNTDPTP-------------------------VLNGGRGNRRGRSHTPRDSDLGFGSERMRS-TSSDGVSKHCRR 1255          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6135.14702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLQ2_9PHAE0.000e+050.34EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LB86_ECTSI2.430e-30749.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 77..177
e-value: 1.1E-7
score: 33.9
NoneNo IPR availablePANTHERPTHR20875FAMILY NOT NAMEDcoord: 433..790
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 512..524
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 117..129
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 699..734
score: 6.424
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 116..139
score: 8.655
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 499..534
score: 5.754
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 115..766

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6135contigL-elsbetiae_contig6135:4158..10741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6135.14702.1mRNA_L-elsbetiae_contig6135.14702.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6135 4149..11138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6135.14702.1 ID=prot_L-elsbetiae_contig6135.14702.1|Name=mRNA_L-elsbetiae_contig6135.14702.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1430bp
MSETLDRIPQLMHELHNQRASDFTSSYRDQHLTQIERQRTISNRATCPAT
AGSPTQRDVPYDIGECVIHSSFPPAPPPRALELVKEEVHRALEAFSTRPL
KGETSARCPADLLRPFDVSRDGRVTYHEFQAGMLGLGIALTNHEAGALAR
AVDREDSGLVDRGRFEAAATQDWGQGGGECEEATSAPERFEGDCPEEQQQ
QAGSRNGTNDASCARIGDNQYADGEERIAPPPPPPRSESPNLVRQASTSE
LATTSSRVRSPPTVSFDHWQRHRTTIRGAGSEDNEVTAPVATALSATRDG
SRKNSSNSDHCETANKSNSGSSSSDNNNNNKDDKRPLPQKRVNSLNTLRS
LLRQDGVFDYADTANNGDYRRHSSFDSGSGGWERRGRRPQQQEQSHSRRL
HEDQRGLRTARGGDGGGGELRRNSGNVEHRHPRDESAPAFGSSYAGPKRG
HVGFNRGGRRQSKDGTGGGHAVAEAQNLERRRQAIATRAESILRLRSRGD
LVGLRRAMSKADPSASGVVSQREMEQVVLRRFGTGLGNDEASELAARYRK
EFNGRSMVDYDRLFDSLDAKEAGLFDQAVAPSSSTPPYSGHGCERGRGRG
RGGGQRQPQQRLLSRDSSGTDKRRPASTAAVAGSRRRGSSLAPPAAGART
RYRQRRCNRRGVPKCNAPAEELAGGTVPAEDSQLVRRARAKTLALLDRHG
TRSVDCVFGLVDPAQTQSISSGELREGLRILGGSDTLSEIEHQALFRDIC
KGHDRIKYRELLDTLRMAEAAENRERTQRKLAHQAGLPTSDRGSASHWCH
SDVLDWDVPPAGGGRGDPSEVGLTGGRQHKESRRQALVFERLRESVRQIQ
KGRNSAGPVFDMFQQGGRGRGEARKNGTAASYAGGNDDKDPDDDQRIPPP
LSPAALRAGLGSLGVPLGDKDFIALMATTDPEQRGEVSYPTFCEALKLHR
LRGGNGGEPAAQRPSSAPPPLTSSRSTGGGEGEGGGYARRRAMELVPPPD
AHTDLEGGVFHLNPATHGCANPNFTTSMIPAGGRDGRGAQQSRADTYRPK
RRQSGGNAFMKAHEQTLLVVGDGDRAGRWNETGAEAERRFCRSLGGKMRR
SKSLSSCYARGRGGWDNLGTPSLRGGAPSPSPSTTSAAAATWADTNASII
TDGSGNRRGRCHIPRNSDLGFGSERMRSQLSGDGDQDHRRRGGRRSSSGG
VADAGSRRTRSLSLGAERRYGNWARSSVQHLLRQDGWLGVRSPRPTGPSS
TTGEPSSGYSSEGKGQHRRRAAAETAVQQTARPRSSPGRRVSNRNNFSDG
FVVLNSARHPAQTRERRPSPYATDADFSSATAPLLARATRGVAGRPLDNF
SRTHPRAVADVRARNSEPEDWGGTITGGGGKAGGEFSSTLRWGESMRSPQ
RPSRRQSARTKQAGAPSSNPKAASKTFFY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair