prot_L-elsbetiae_contig613.14696.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig613.14696.1
Unique Nameprot_L-elsbetiae_contig613.14696.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
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BLAST of mRNA_L-elsbetiae_contig613.14696.1 vs. uniprot
Match: A0A6H5LQ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ53_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 2.870e-17
Identity = 70/128 (54.69%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:    1 MTSGRKRVKRSQKAKELRAKHFSKVAADRVRAPVSQQVRAGGSLSSRQSADVSRLNSRWTQQ-PTTVQAPFPKPGRRAAASGSSPAPPAATEGIDAAYPASAATPVGPGTTTPDSGSLLPGLLELDVT 127
            MTSGRKRV+RSQK KELRAKHF+KVAADR RAPVS+  RA  S  + QSADVSRL SRW Q  P+T + P      +   +GS+ A     E  D+A P S  T +G GT TPD     PG L+L+VT
Sbjct:    4 MTSGRKRVQRSQKVKELRAKHFAKVAADRARAPVSRPARASSSTLN-QSADVSRLKSRWIQPLPSTHKVP----ALQRTVAGSAAAEHTTAE--DSASPPSNVTTLGSGT-TPD---FQPGTLDLEVT 120
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig613.14696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LQ53_9PHAE2.870e-1754.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig613contigL-elsbetiae_contig613:33207..34420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig613.14696.1mRNA_L-elsbetiae_contig613.14696.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig613 33207..34474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig613.14696.1 ID=prot_L-elsbetiae_contig613.14696.1|Name=mRNA_L-elsbetiae_contig613.14696.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
MTSGRKRVKRSQKAKELRAKHFSKVAADRVRAPVSQQVRAGGSLSSRQSA
DVSRLNSRWTQQPTTVQAPFPKPGRRAAASGSSPAPPAATEGIDAAYPAS
AATPVGPGTTTPDSGSLLPGLLELDVT
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