prot_L-elsbetiae_contig613.14694.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig613.14694.1
Unique Nameprot_L-elsbetiae_contig613.14694.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length161
Homology
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BLAST of mRNA_L-elsbetiae_contig613.14694.1 vs. uniprot
Match: D8LT82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT82_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.020e-6
Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 0 
Query:   30 DDSAKWRRRYEHLAGLLAERTKRSSEKTDRLATPTKT------KTSPRSTRTLI----TYASSGGSTISQQETRPRSVTASSTSSIGVQGDLVPTTKPSAVVDGSSNTTPRPPSPPLA 137
            DD+  WRRRYEHLAGLLA +TK++S    RLAT  +T      ++SPR  R ++    T  S G  T S +E  P S   S+  ++   G   P + P    + SSNT+PRPPSP +A
Sbjct:  815 DDTGTWRRRYEHLAGLLAVQTKQNSAMASRLATSGRTGPSSSRRSSPR--RRIVPPAETPLSLGTPTASPEERLPHSTGPST--AVSKNGGAKPRSSPKRA-NRSSNTSPRPPSPAIA 927
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig613.14694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT82_ECTSI1.020e-642.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig613contigL-elsbetiae_contig613:8169..9121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig613.14694.1mRNA_L-elsbetiae_contig613.14694.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig613 8167..9121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig613.14694.1 ID=prot_L-elsbetiae_contig613.14694.1|Name=mRNA_L-elsbetiae_contig613.14694.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp
EPPPPDVAVAPSPPPAAMAASPPSLPEVVDDSAKWRRRYEHLAGLLAERT
KRSSEKTDRLATPTKTKTSPRSTRTLITYASSGGSTISQQETRPRSVTAS
STSSIGVQGDLVPTTKPSAVVDGSSNTTPRPPSPPLAGKPTSLETEGEGK
AGQAAPVALVS
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