prot_L-elsbetiae_contig6.14512.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6.14512.1
Unique Nameprot_L-elsbetiae_contig6.14512.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length289
Homology
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BLAST of mRNA_L-elsbetiae_contig6.14512.1 vs. uniprot
Match: A0A7S3ZWW5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWW5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.900e-5
Identity = 43/114 (37.72%), Postives = 56/114 (49.12%), Query Frame = 0 
Query:    2 DGASALHISSMKGRIDASRALLRLGAAPEVHGTGPLSGKTPWDVATTAVRQVYASELFSQVAQGEEGKVLALLRA-GVRADVTDGGS-RSDTPLHWAAGAGHVSLCSILLENGA 113
            D AS L  +    ++DA RALLR+GA P        S    W    +A R    +EL  QVA G+ G+V  LLR  G    ++D  +   D+PLHWAA  G  +    LL  GA
Sbjct:   71 DDASLLEKACSSNKVDAVRALLRVGAIPAA------STPVAWLEEGSACRAAAHAELMQQVALGDAGRVTKLLRLLGPIPRLSDAATFGGDSPLHWAASFGQETALEALLAAGA 178
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6.14512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3ZWW5_9STRA5.900e-537.72Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 137..151
score: 38.01
coord: 89..104
score: 38.75
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 88..117
e-value: 5.8E-4
score: 29.2
coord: 121..150
e-value: 3.6E-5
score: 33.2
coord: 2..31
e-value: 0.84
score: 18.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 88..120
score: 12.396
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 121..153
score: 12.636
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 2..34
score: 9.564
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 68..149
e-value: 3.2E-13
score: 50.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 2..166
score: 29.441
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..177
e-value: 1.5E-29
score: 104.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..156
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 55..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6contigL-elsbetiae_contig6:79210..81879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6.14512.1mRNA_L-elsbetiae_contig6.14512.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6 79210..81880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6.14512.1 ID=prot_L-elsbetiae_contig6.14512.1|Name=mRNA_L-elsbetiae_contig6.14512.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
SDGASALHISSMKGRIDASRALLRLGAAPEVHGTGPLSGKTPWDVATTAV
RQVYASELFSQVAQGEEGKVLALLRAGVRADVTDGGSRSDTPLHWAAGAG
HVSLCSILLENGADLTRCNSEGASALHEASKCGHADVVSLLLERGANPHV
VGTAGEFKDKTPLQVSSGQAVSEALRSPLPPPRSAPPPPAPPSEGQLSDG
LEETRVPGVGDGLARPLGSGVAGGGEEESLVEVRPDGHRRRRVERGWEQA
KEEEETGEEERNGEGGHEGRASLAAAGVSRGAAAAKDSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf