prot_L-elsbetiae_contig59.14365.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig59.14365.1
Unique Name	prot_L-elsbetiae_contig59.14365.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	144

Homology

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: D8LNR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR1_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 4.740e-71
Identity = 111/149 (74.50%), Postives = 128/149 (85.91%), Query Frame = 0

Query:    1 MDATSFTLPAAWCFLAVKLTFQTTRQCTPKRPKRGKNKGGAV-----QVHQG-AGTSQLVHLPTEVAFKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLACDRYL 143
            M+A+S+TLPAA+CF+AV+LTFQ TRQ TPKRPKRGK KGG       Q  QG A TSQ V+LPT+VAFK+ I+AA+K+LHGE+GSLAYPVDVLSWDA +GEGRLRVPAR LVPIRAALS VGSCG+VPCAIDV + SPFLAGLAC+RYL
Sbjct:    1 MEASSYTLPAAFCFIAVQLTFQATRQATPKRPKRGKVKGGGTTQRQQQAPQGSAATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSFVGSCGDVPCAIDVREVSPFLAGLACERYL 149

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: A0A8J6EM83_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EM83_ELECQ)

HSP 1 Score: 64.7 bits (156), Expect = 1.380e-10
Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 0

Query:   60 VAFKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLA 138
            V  KSLI++ALKELHGE+G+ +YP+DVL +D       LR+ +  LV +  +L++VG      C+I V   SPFL  LA
Sbjct:   43 VQLKSLILSALKELHGEVGA-SYPLDVLKFDGKTSSAILRIKSSGLVKLWTSLTMVGQYQGQLCSIRVLQTSPFLLALA 120

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: UPI0003C10CDB (ribonuclease P protein subunit p14 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C10CDB)

HSP 1 Score: 63.9 bits (154), Expect = 3.060e-10
Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 0

Query:   62 FKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLA 138
            FK LIIAALKELHGE G+ A P DVL+++       +RV +  LV + +A++L+G   N  CAI VT  SPFL  L+
Sbjct:   50 FKQLIIAALKELHGETGA-ALPFDVLTFEEKTTSAIVRVYSSGLVKLWSAITLLGYYQNQKCAIRVTQVSPFLLALS 125

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: UPI001864E3F3 (ribonuclease P protein subunit p14 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864E3F3)

HSP 1 Score: 63.2 bits (152), Expect = 8.440e-10
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 0

Query:   62 FKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLA 138
            FK LI++ALK+L+GE+G+ A+P DVL ++       LRV    LV + +AL+L+GS  + PCA+ VT  SPFL  L+
Sbjct:   66 FKQLIVSALKDLYGEIGA-AFPFDVLKFEENTLTAVLRVYNSGLVKLWSALTLLGSYQSEPCAVRVTQVSPFLLALS 141

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: A0A4W3J7P9_CALMI (Uncharacterized protein n=5 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J7P9_CALMI)

HSP 1 Score: 62.0 bits (149), Expect = 1.570e-9
Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 0

Query:   60 VAFKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLACD 140
            V FK LI+AAL++LHGE+G+ A PVDVL+++       LRV  R LV + +AL+L+G      CA  V   SPFL  L+ D
Sbjct:   40 VQFKHLIVAALRDLHGEIGA-ALPVDVLTFEEEILSAILRVQNRGLVKLWSALTLLGCYQGQKCAFRVLQVSPFLLALSGD 119

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: UPI0004574E47 (ribonuclease P protein subunit p14 isoform X1 n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI0004574E47)

HSP 1 Score: 62.0 bits (149), Expect = 2.280e-9
Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 0

Query:   60 VAFKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLACD 140
            V FK LI+AAL++LHGE+G+ A PVDVL+++       LRV  R LV + +AL+L+G      CA  V   SPFL  L+ D
Sbjct:   58 VQFKHLIVAALRDLHGEIGA-ALPVDVLTFEEEILSAILRVQNRGLVKLWSALTLLGCYQGQKCAFRVLQVSPFLLALSGD 137

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: A0A7D9IBD1_PARCT (Ribonuclease P subunit p14 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IBD1_PARCT)

HSP 1 Score: 61.6 bits (148), Expect = 2.410e-9
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 0

Query:   60 VAFKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLACD 140
            V  KSLI+ ALK+LHG +G+ A  VDVL  +  +GE  LRV +  L+ +R++L+++ +    PC  +V   SP+L  LA D
Sbjct:   36 VKLKSLIVNALKQLHGLVGA-AITVDVLKCEKTSGEIILRVKSSDLIKLRSSLTILNNYNGTPCRCNVKQVSPYLMSLAAD 115

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: Q07G50_XENTR (Ribonuclease P 14kDa subunit n=3 Tax=Xenopus TaxID=8353 RepID=Q07G50_XENTR)

HSP 1 Score: 60.8 bits (146), Expect = 4.840e-9
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 0

Query:   62 FKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLA 138
            FK L+++ALK LHGE+GS + P+D+LS+D       LRV +R LV + ++L+L+G   N  C+I V   SPFL  LA
Sbjct:   52 FKLLVVSALKNLHGEVGS-SLPLDLLSFDEKTLCAVLRVCSRGLVKLWSSLTLLGHYKNHECSIRVIQTSPFLLALA 127

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: UPI001AACA93D (ribonuclease P protein subunit p14-like isoform X2 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AACA93D)

HSP 1 Score: 58.9 bits (141), Expect = 2.280e-8
Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 0

Query:   58 TEVAFKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLA 138
            T   +KSLI++A+KELHGE+G+ + P+D+L +D       LR+ +   V +  +L+L+G   N  C+I V   SPFL  LA
Sbjct:   41 TAAQYKSLIVSAVKELHGEVGA-SCPLDLLKYDDKTLSAILRINSSGFVKLWTSLTLLGHYQNQECSIRVLQVSPFLLALA 120

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BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Match: UPI001C64A4DA (ribonuclease P protein subunit p14 n=1 Tax=Centrocercus urophasianus TaxID=9002 RepID=UPI001C64A4DA)

HSP 1 Score: 58.2 bits (139), Expect = 4.780e-8
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0

Query:   57 PTEVAFKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRVPARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLA 138
            P     K L++AAL+ELHGE+G+ A PVDVL+++  +    LRV +  LV + +AL+L G   N  CA  V   SPFL  LA
Sbjct:   43 PGAPQLKQLVVAALRELHGEVGA-ALPVDVLAYEEKSLCAVLRVISGGLVKLWSALTLQGFYQNRRCAFRVLQTSPFLLALA 123

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig59.14365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22


Match Name	E-value	Identity	Description
D8LNR1_ECTSI	4.740e-71	74.50	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A8J6EM83_ELECQ	1.380e-10	45.57	Uncharacterized protein n=1 Tax=Eleutherodactylus ...	[more]
UPI0003C10CDB	3.060e-10	49.35	ribonuclease P protein subunit p14 n=1 Tax=Latimer...	[more]
UPI001864E3F3	8.440e-10	46.75	ribonuclease P protein subunit p14 n=1 Tax=Megalop...	[more]
A0A4W3J7P9_CALMI	1.570e-9	46.91	Uncharacterized protein n=5 Tax=Callorhinchus mili...	[more]
UPI0004574E47	2.280e-9	46.91	ribonuclease P protein subunit p14 isoform X1 n=1 ...	[more]
A0A7D9IBD1_PARCT	2.410e-9	41.98	Ribonuclease P subunit p14 n=3 Tax=Paramuricea cla...	[more]
Q07G50_XENTR	4.840e-9	46.75	Ribonuclease P 14kDa subunit n=3 Tax=Xenopus TaxID...	[more]
UPI001AACA93D	2.280e-8	40.74	ribonuclease P protein subunit p14-like isoform X2...	[more]
UPI001C64A4DA	4.780e-8	45.12	ribonuclease P protein subunit p14 n=1 Tax=Centroc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002759	Ribonuclease P/MRP protein subunit	PFAM	PF01900	RNase_P_Rpp14	coord: 59..131 e-value: 1.3E-4 score: 22.1
IPR038085	Rnp2-like domain superfamily	GENE3D	3.30.70.3250		coord: 53..138 e-value: 3.3E-5 score: 25.9
IPR038085	Rnp2-like domain superfamily	SUPERFAMILY	160350	Rnp2-like	coord: 57..136
None	No IPR available	PANTHER	PTHR15441	FAMILY NOT NAMED	coord: 58..141
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..143
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..17
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.52

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig59	contig	L-elsbetiae_contig59:50687..51899 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig59.14365.1	mRNA_L-elsbetiae_contig59.14365.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig59 49928..51935 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig59.14365.1 ID=prot_L-elsbetiae_contig59.14365.1|Name=mRNA_L-elsbetiae_contig59.14365.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp
MDATSFTLPAAWCFLAVKLTFQTTRQCTPKRPKRGKNKGGAVQVHQGAGT
SQLVHLPTEVAFKSLIIAALKELHGEMGSLAYPVDVLSWDAANGEGRLRV
PARCLVPIRAALSLVGSCGNVPCAIDVTDASPFLAGLACDRYL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002759	RNase_P/MRP_subunit
IPR038085	Rnp2-like_sf