prot_L-elsbetiae_contig5890.14356.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5890.14356.1
Unique Nameprot_L-elsbetiae_contig5890.14356.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length64
Homology
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BLAST of mRNA_L-elsbetiae_contig5890.14356.1 vs. uniprot
Match: A0A1Y2CB00_9FUNG (L domain-like protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CB00_9FUNG)

HSP 1 Score: 72.4 bits (176), Expect = 1.120e-13
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:   11 PQIVSGWEHSTYAHRSTDRYSYIGKDDTTGEPEWIDYGGK 50
            P I+SGWEHSTYAHR T+RY+YIGKDD  GEP+WIDYG K
Sbjct:  235 PTIISGWEHSTYAHRDTERYAYIGKDD--GEPQWIDYGSK 272
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BLAST of mRNA_L-elsbetiae_contig5890.14356.1 vs. uniprot
Match: A0A0L0G851_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G851_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 1.170e-12
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0 
Query:    4 PPATQDNPQIVSGWEHSTYAHRSTDRYSYIGKDDTTGEPEWIDYGGKQANA 54
            PP+ +  PQI+SGWEHS YAHR T+R +Y GK+D  G+PEW+DYG K A +
Sbjct:    9 PPSPE--PQIISGWEHSRYAHRDTERNAYKGKNDG-GDPEWLDYGSKSARS 56
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5890.14356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1Y2CB00_9FUNG1.120e-1377.50L domain-like protein n=1 Tax=Rhizoclosmatium glob... [more]
A0A0L0G851_9EUKA1.170e-1258.82Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5890contigL-elsbetiae_contig5890:8730..8921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5890.14356.1mRNA_L-elsbetiae_contig5890.14356.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5890 8730..8921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5890.14356.1 ID=prot_L-elsbetiae_contig5890.14356.1|Name=mRNA_L-elsbetiae_contig5890.14356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=64bp
APPPPATQDNPQIVSGWEHSTYAHRSTDRYSYIGKDDTTGEPEWIDYGGK
QANAEAAQQRRNK*
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