prot_L-elsbetiae_contig5859.14319.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5859.14319.1
Unique Nameprot_L-elsbetiae_contig5859.14319.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length381
Homology
BLAST of mRNA_L-elsbetiae_contig5859.14319.1 vs. uniprot
Match: D8LDA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA8_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 2.050e-54
Identity = 159/417 (38.13%), Postives = 201/417 (48.20%), Query Frame = 0
Query:    2 QLENTVCRVVYVPGPLDPVMPPVRISRTPN------------------------HGGXXXXXXXXGVRQGLLQLTPTSKNLHRRNLRLAPGLSMAGFTDEPDLRVDSSSXXXXXGRDTGSKAGWVDGEDKFVDDQTLSALRSLCRSGGSGIRSSGRGLATLKESVILMTRLGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAGRLRHLWAQQAEVRAATTRDSDNXXXXXXXXXXXXXXDGGGGVLLHVCAGPGAFLAVHEALAAGAEDVIDXXXXXXXXXXXSVGIGCKIGG-CTVAALGSLREHGAFCVAELAMPSRGDP-------------LSGWSVAGVRFGKLDGRDGERDDAKMRLARAAAGNFVINYD 380
            QLENTVCRV+YVPGPLDPV+P +R+ RT N                         G         G ++ +LQLTPTSKN+ RRNLRLAPGLS AGF+++P+            G   G+  G     D   +DQT +AL+SL RSGG   + +G+      ESVIL+TRLGG     XXXXXXXXXXXXXX                                                 TA RLR LW + A    A   +S                 GGGG+LLH CAGPG  LAV EAL  G  + +              G+GC++GG  TVAALGSLR+HGA+CV EL MP+   P               GWSVA V FG+++  DG+ +  + +LA  A G+FV+N++
Sbjct:  123 QLENTVCRVIYVPGPLDPVIPSIRLPRTRNTAAVPTTASRPPPVAAATPGADAGRGAEGRGGQRDGGKERVLQLTPTSKNVLRRNLRLAPGLSAAGFSEDPNQ---------CPGNTVGAGEGGGGAGDDTPEDQTFAALKSLSRSGGK--KGAGKAAPVPPESVILLTRLGGPRRPGXXXXXXXXXXXXXXTPPTSNSNSNQDTLNVAKRAAGPTEVEDQEA-----------------ATAARLRLLWTEPA---MAVGPESG---------PRGLEDGGGGGLLLHACAGPGTLLAVREALEEGGAEPVGGGGAGGDGDCAR-GVGCRVGGGTTVAALGSLRQHGAYCVVELDMPATVPPGPRSGNGSGGVGAKEGWSVASVAFGRVEAADGDPEAEREKLAHRATGSFVLNFE 498          
BLAST of mRNA_L-elsbetiae_contig5859.14319.1 vs. uniprot
Match: A0A6H5KN29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN29_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.440e-40
Identity = 127/350 (36.29%), Postives = 166/350 (47.43%), Query Frame = 0
Query:   45 RQGLLQLTPTSKNLHRRNLRLAPGLSMAGFTDEPDLRVDSSSXXXXXGRDTGSKAGWVDGEDKFVDDQTLSALRSLCRSGGSGIRSSGRGLATLKESVILMTRLGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAGRLRHLWAQQAEVRAATTRDSDNXXXXXXXXXXXXXXDGGGGVLLHVCAGPGAFLAVHEALAAGAEDVIDXXXXXXXXXXXSVGIGCKIGG-CTVAALGSLREHGAFCVAELAMPSRGDP-------------LSGWSVAGVRFGKLDGRDGERDDAKMRLARAAAGNFVINYD 380
            ++ +LQLTPTSKN+ RRNLRLAPGLS AGF+++P+            G   G+  G   G+D   +DQT +AL+SL RSGG   + +G+      ESVIL+TRLGG                                                                    TA RLR LW +QA V    +        XXXXXXXX        +LLH CAGPG FLAV EAL  G  + +              G+GC++GG  TVAALGSLR+HGA+CV EL MP+   P               GWSVA V FG+++  DG+ +  + +LAR A G+FV+N++
Sbjct:   49 KERVLQLTPTSKNVLRRNLRLAPGLSAAGFSEDPNQ---------WPGNTVGAGEGGGAGDDT-PEDQTFAALKSLSRSGGK--KGAGKAAPVPPESVILLTRLGGPQRPGAGAGGAGANVSSADTPPVSNSNNDQDTLNVAEGAAGPTALEDQAA-----------------ATAARLRLLWTEQAMVVGPESGPRGLEEGXXXXXXXX--------LLLHACAGPGTFLAVREALEEGGAEPVGGGGAGGDGDC--AGVGCRVGGGATVAALGSLRQHGAYCVVELDMPTPVPPGPRSGNESGGVGAKEGWSVASVAFGRVEAADGDPEAEREKLARRATGSFVLNFE 359          
BLAST of mRNA_L-elsbetiae_contig5859.14319.1 vs. uniprot
Match: A0A835YTR0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTR0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.980e-8
Identity = 38/83 (45.78%), Postives = 45/83 (54.22%), Query Frame = 0
Query:    1 AQLENTVCRVVYVPGPLDPVMPPVRISRTPNHGGXXXXXXXXGVRQGLLQLTPTSKNLHRRNLRLAPGLSMAGFTDEPDLRVD 83
            AQLEN VCR VYVPGP DPVMP                      R G  QLT TS+N++ + LRL PGL +AG+T+ P    D
Sbjct:   85 AQLENIVCRAVYVPGPNDPVMPAFT------------------GRYGTPQLTGTSQNINSKVLRLLPGLCIAGYTEAPGQDAD 149          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5859.14319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDA8_ECTSI2.050e-5438.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN29_9PHAE1.440e-4036.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTR0_9STRA1.980e-845.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5859contigL-elsbetiae_contig5859:443..2832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5859.14319.1mRNA_L-elsbetiae_contig5859.14319.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5859 443..2832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5859.14319.1 ID=prot_L-elsbetiae_contig5859.14319.1|Name=mRNA_L-elsbetiae_contig5859.14319.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=381bp
AQLENTVCRVVYVPGPLDPVMPPVRISRTPNHGGAAAPPPPPGVRQGLLQ
LTPTSKNLHRRNLRLAPGLSMAGFTDEPDLRVDSSSSGGGGGRDTGSKAG
WVDGEDKFVDDQTLSALRSLCRSGGSGIRSSGRGLATLKESVILMTRLGG
ARRQRRRRRRPSACENSTGADSSSSSTATTAAEAAADRLSAAESSPSTTT
TSAAARGDEAAAAAAAAVTAGRLRHLWAQQAEVRAATTRDSDNGDGPGEG
KGWGRGSDGGGGVLLHVCAGPGAFLAVHEALAAGAEDVIDDDESSSSSSS
SSVGIGCKIGGCTVAALGSLREHGAFCVAELAMPSRGDPLSGWSVAGVRF
GKLDGRDGERDDAKMRLARAAAGNFVINYD*
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