prot_L-elsbetiae_contig5832.14280.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5832.14280.1
Unique Nameprot_L-elsbetiae_contig5832.14280.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
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BLAST of mRNA_L-elsbetiae_contig5832.14280.1 vs. uniprot
Match: D7FP45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP45_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 4.130e-45
Identity = 103/216 (47.69%), Postives = 125/216 (57.87%), Query Frame = 0 
Query:    1 VIHKTEFVTEAGEAMRMVVRQDVKGRLGMKQFGLSVLVFDFEPAGAITTENSPTASGRLAPASGSSTADAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEAEGEERGTVVPATSLRRGQGCVVLVHDRWNGHKELYRNHRLVYSVKKECSDGNLNSWVIPLPFGRVVLKLTNKFFSLNGFEYLMTL--HDGG----------SVLFKS 204
            V HKTEF + A EA+++ VRQDV  + G K+ G SVLVFDF+PAGAIT+ NSP  +   APA  SST  A                                   G E  GE  G V  A+S+     CVV VH+R+NG K+LY N  L YSVKKEC+DGNLNSWVIPLPFGR VL+LT+K F+ +GFEY+MTL  HD G          +VL+KS
Sbjct:   17 VKHKTEFRSNADEALKLTVRQDVTRKAGFKKLGRSVLVFDFQPAGAITSTNSPN-NVMDAPAHESSTVMAE--------GALRAAAVDTAGRAGGDWSARAGPGEGEEGSGESTG-VTSASSV-----CVVFVHNRYNGAKQLYVNRALAYSVKKECTDGNLNSWVIPLPFGRAVLRLTSKLFASSGFEYVMTLDNHDRGGGXXXXXXRGTVLYKS 217
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5832.14280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP45_ECTSI4.130e-4547.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5832contigL-elsbetiae_contig5832:556..2343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5832.14280.1mRNA_L-elsbetiae_contig5832.14280.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5832 556..2343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5832.14280.1 ID=prot_L-elsbetiae_contig5832.14280.1|Name=mRNA_L-elsbetiae_contig5832.14280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
VIHKTEFVTEAGEAMRMVVRQDVKGRLGMKQFGLSVLVFDFEPAGAITTE
NSPTASGRLAPASGSSTADAAVAAVAGASAREAAAEGGGEGAEGATAAAA
AAAAAGGEAEGEERGTVVPATSLRRGQGCVVLVHDRWNGHKELYRNHRLV
YSVKKECSDGNLNSWVIPLPFGRVVLKLTNKFFSLNGFEYLMTLHDGGSV
LFKSN*
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