prot_L-elsbetiae_contig5827.14267.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5827.14267.1
Unique Nameprot_L-elsbetiae_contig5827.14267.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length330
Homology
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: D8LI41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI41_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 2.380e-103
Identity = 175/207 (84.54%), Postives = 185/207 (89.37%), Query Frame = 0
Query:    1 MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGG-GQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQD 206
            MLP SPDKY+RFGGPSRGVSFFQTAG G ASSSKA PDRLLSSHE+LH + VTAAACS DG+LLLTGA DGTCRLW+ V L SRS G GQVSRMLDLAA LG H GPVTCA++CMGSGSAVTGGA GKVLVWDIRRK FVRELPGHRS ISSV+IN+TNGNVVTLSGSELRVW VNGRLLASCSVTALRRGA PTCAVST CPDWQ+
Sbjct: 1163 MLPKSPDKYLRFGGPSRGVSFFQTAGGGTASSSKATPDRLLSSHESLHLTAVTAAACSVDGSLLLTGALDGTCRLWSVVTLQSRSSGLGQVSRMLDLAASLGRHAGPVTCATVCMGSGSAVTGGADGKVLVWDIRRKNFVRELPGHRSGISSVEINKTNGNVVTLSGSELRVWNVNGRLLASCSVTALRRGAPPTCAVSTNCPDWQE 1369          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A835YWR3_9STRA (BEACH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWR3_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.750e-75
Identity = 150/331 (45.32%), Postives = 190/331 (57.40%), Query Frame = 0
Query:    7 DKYVRFGGPSRGVSFFQTAGFGAASSSK-----AAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGA-SGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLV--RVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 329
            D+YVRFGGPS GV+F+Q                AAPD LLS+H+ LH  P+T AA ++ GA L TG  DG  R+W SVA    +GGG   R L+L   L  H G V C   C   G  V+GGA   +VLVWD+ R  F+RELPGHR R+++V +NR  G  VTL+ +ELRVW VNG LLA  S  A +R + PT A++T CP WQ+GVVA TGHDNGDV LW I+W G                 G          +G            + P  LV  RVL+GAH + +T VRVC+  RE+L GD+ G +SRWQC+RL  +S  EL +L+
Sbjct:  367 DEYVRFGGPSCGVAFYQIGXXXXXXXXXXXXXXAAPDALLSAHDGLHARPITCAAYADSGAALATGGGDGALRVW-SVAPSYYAGGG---RTLELRGTLAAHAGAVACVDACEPFGVLVSGGACDARVLVWDLNRLAFLRELPGHRGRVTAVSVNRATGGAVTLASAELRVWGVNGDLLARWS--AAQRRSLPTVAIATRCPHWQEGVVAVTGHDNGDVSLWGIQWSGAGGXXXXXXXXXXXXXXG----------AGCEETGSIMARTSIPPRDLVCRRVLNGAHTRAVTCVRVCDDQRELLVGDAKGVVSRWQCLRLADMSQGELRELM 681          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A6H5KXI6_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI6_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 9.350e-62
Identity = 111/137 (81.02%), Postives = 119/137 (86.86%), Query Frame = 0
Query:    1 MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGG-GQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRK 136
            MLP SPDKY+RFGGPSRGVSFFQTAG G ASSSKA PDRLLSSHE+LH + VTA+ACS DG+LLLTGA DGTCRLW+ V LH RS G GQVSRMLDLAA LG H GPVTCA++ MGSGSAVTGGA GKVLVWDIRRK
Sbjct:  178 MLPKSPDKYLRFGGPSRGVSFFQTAGGGTASSSKATPDRLLSSHESLHLTAVTASACSVDGSLLLTGALDGTCRLWSVVTLHGRSSGLGQVSRMLDLAASLGRHAGPVTCATVGMGSGSAVTGGADGKVLVWDIRRK 314          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: W7TSW7_9STRA (Wd repeat and fyve domain-containing protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSW7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.060e-52
Identity = 132/351 (37.61%), Postives = 181/351 (51.57%), Query Frame = 0
Query:    1 MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWN---------SVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGA---GXXXXAGPVDDV-----------RPLKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQL 328
            ++P S  KY R+G P  G++F         ++     DR++S HE LH  PV   A  E G L +TG+ D T R+W+            L+S +GGG   + L L A L  H   V C  +    G  ++GGA    +VWD+R  T  R L GH + + SV IN+  G++VTL G ++RVW+V G LLA  S  A+ +   PTCAV+T CP+W +GVVA TGHDNG + LW +        S   A     R    A  RE RA  G         AGP  +V           R LK++++L G H   IT +RV +  R + AGD++G+ SRW  +RLDQ+   EL QL
Sbjct: 3827 LVPPSLVKYARYGSPDNGLAFRVAI----PTTRHQYVDRVVSVHEQLHLGPVNCLALDEAGELAVTGSLDSTLRVWSLAKHNASAPPTQLYSNAGGG--GKTLSLQATLCGHSSEVLCVDVAAELGILLSGGADRVAVVWDVRDFTSQRLLVGHAAPVISVSINKLTGDMVTLGGVDVRVWSVTGELLAQVSAIAVVKEV-PTCAVATGCPEWLNGVVAVTGHDNGKLCLWGLH-----HLSDDEAGQRLDRGASAAGAREERAWRGGKCMDGDDLAGPGAEVDLGSNTGTTQGRQLKVMQILQGIHTAAITAIRVGKDQRGVTAGDATGKCSRWTSMRLDQMPERELVQL 4165          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S3Y939_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y939_HETAK)

HSP 1 Score: 146 bits (368), Expect = 1.150e-38
Identity = 90/244 (36.89%), Postives = 137/244 (56.15%), Query Frame = 0
Query:   94 LDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRP--------LKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 329
            L L A L  H G VT  +L +  G  V+GG   + ++WD  R  F+R+L  H   + SV IN++ G+VVTL G +LRV++VNG LLA+   T+LRR   PT AV+T+CP WQ+G++A  GH NGDV LW+I+         H    +P+ ++ G  P++    +            +  P        L+L + L+  H+ +IT +++  G +E+L GD +G ISRW   R+DQL   E ++L+
Sbjct:    5 LRLRAVLCGHEGAVTAVALSLRHGRVVSGGLDRRAILWDAVRHCFLRQLGWHPGPLQSVSINQSTGDVVTLGGGDLRVYSVNGDLLAA--NTSLRRD-MPTKAVATDCPYWQNGIIAVVGHQNGDVTLWTID---------HN---QPMTQIQG-DPQDQEGTANVYSDDFHDAASNTIPAQFSVPKQLQLKKHLTSVHRSKITCIKIFSG-QEILVGDYNGVISRWSSFRIDQLKPHEQHELL 231          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S2WG18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WG18_9STRA)

HSP 1 Score: 152 bits (383), Expect = 6.060e-38
Identity = 106/300 (35.33%), Postives = 150/300 (50.00%), Query Frame = 0
Query:   45 EALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRR--GASPTCAVSTECPDWQ-DGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPRE---ARAPSGAGXXXXAGPVDDVRPLKLVRVLS---------GAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 329
            E LH  PV+     ED + L+TG+ DGT R+W+ V        G      +L A L  H   V     C G G  V+GG    V VWD+    F+R L  H   ++SV +N + G+++TL+G EL + TVNG L+A  S+  + R  G  PTC VST C +W    +VAA GHDNG V LWSI+     R S   +     +    AS +    A A +GAG    A  V+  R     R             A +  +T +RV   G ++L GD++G + RW  +RLDQLS+++L  ++
Sbjct:  289 EQLHHQPVSCVTVCEDSSWLVTGSFDGTIRIWSFVRR------GLPHSSAELRATLCGHGDAVRSLDACPGYGIVVSGGVDSLVNVWDLHSGQFLRSLSSHSIPVTSVSVNTSTGDILTLAGFELCLHTVNGVLIAMSSLANVPRVMGHPPTCMVSTHCCEWPAHSIVAAVGHDNGAVTLWSIQRHEKGRDSGRFSQTASAQDQASASDQRCENALAEAGAGGKEPA-VVESARHAVQCRAFELRQYLTPNEEAGKHAVTALRVANRGSDLLVGDAAGTLRRWTALRLDQLSTDDLKTVL 581          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: K0R395_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R395_THAOC)

HSP 1 Score: 148 bits (373), Expect = 7.570e-36
Identity = 115/346 (33.24%), Postives = 161/346 (46.53%), Query Frame = 0
Query:    1 MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSR--------------ISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGAS-PTCAVSTECPDWQD-GVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE--MLAGDSSGEISRWQCIRLDQLSSEELNQL 328
            +LPS   KY+R+GGP+ GVS          ++     +++LS H+ +H+ P+T A  S +G  L TG  D T RLW               + + L A L  H G +TC  +    GS ++GGA GK+LVWD+R  TF+REL  H S               + SV IN  NGN+VTL  S L V+ +NG L+A      +  G   P+  +ST CP+W + G+VA TGH NGDV LW I++        H   PE +                                         H   IT +R   G R+  +L GD+SG++S    ++LDQLS EEL  +
Sbjct: 2044 LLPSK--KYIRYGGPNNGVSVHVAV----TTARHREVNKVLSIHDGMHRGPITVAKPSLNGLWLATGGIDSTVRLWK-----------YYGQNMQLQATLCGHCGKITCLDISTTFGSIISGGADGKILVWDLRTLTFLRELK-HTSNAPTAAHAGSSKSFSVKSVSINHKNGNMVTLLLSTLCVFDINGNLVAKQHPDEVFSGNQIPSVVISTNCPEWMELGIVAVTGHMNGDVRLWGIDYENKILLLRH-ILPERV-----------------------------------------HSCPITTLRAT-GERQDTLLIGDASGKMSVCNTVKLDQLSPEELQSI 2328          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S2E6R0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6R0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 5.260e-34
Identity = 107/340 (31.47%), Postives = 165/340 (48.53%), Query Frame = 0
Query:    1 MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELP-------GHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLA---SCSVTALRRGASPTCAVSTECPDW-QDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 329
            +LPS   KY R+GGP+ G+S     G           +R+LS H+ +H++P++    S +G  L++G  D T R+W       +  GG +     L    G   G +TC  +    G  VTGGA G VLVWD+R  TF+R+L        G  + +S V IN+ NGN++TL GS + ++ +NG L+A   S    A++    P+CAV+T+CP+W ++G+VA TGH NGD+ LWSI++        H   P+ +                              P+  +RV+S             +    +L GD SG++S  + + LD L   EL +L+
Sbjct: 1697 ILPSK--KYYRYGGPNNGISVHHAVG-------GYKENRVLSIHDDMHRAPISVLKPSLNGLWLVSGCMDSTIRVW-------KYDGGNMHLQATLC---GHDNGKITCIDVSTTFGMIVTGGADGNVLVWDLRTLTFMRKLRHPTLKGIGETAAVS-VSINQKNGNIMTLIGSRICLFDINGNLVAKQQSSDEFAIKH--RPSCAVATDCPEWMENGIVAITGHVNGDLRLWSIDYDENILIMRH-LMPDKVHSC---------------------------PITALRVIS-------------DNQHSLLVGDKSGKMSVCKTLSLDSLPQNELQRLL 1973          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S3Q415_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q415_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.730e-33
Identity = 108/342 (31.58%), Postives = 171/342 (50.00%), Query Frame = 0
Query:    1 MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGP-VTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVREL---PGHRSR-----ISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGAS-PTCAVSTECPDWQD-GVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE--MLAGDSSGEISRWQCIRLDQLSSEELNQLV 329
            ++PS+  KY RFGG + G+SF      G  +      +R+ + H+ +H++P+T+   S DG  L+TG  D T R+W     H           +DL A L  H G  +TC  +C   G+ +TG   G VL+WD+R  +F+REL   P    R     + SV +N   G+V+ L  S++ ++ +NG L+A+ +   +  G +  +CA+ST+CP+W D G+VA TGH +G+V+LW I+          R   E I R       + R+                       V +  H   IT +R+ EG R+  +L GD SG+ S W+ I LD +S ++  ++V
Sbjct: 3443 LIPSTK-KYYRFGGSNNGISFH----VGIPTVKNWEVNRVHTIHDDMHRAPITSVKPSRDGQWLVTGCLDSTVRVWKYENDH-----------VDLQASLCGHEGAKITCIDICTTFGTIITGADDGTVLMWDLRTLSFLRELDHIPQTDRRAMPKSVKSVSLNDKTGDVLILVDSKVTIFDINGNLVATMNPRDILAGNNRASCAISTDCPEWTDHGIVAITGHVDGNVILWGID----------RDEIELIPRF------QTRS----------------------EVQTQIHMSPITCLRI-EGKRQNALLCGDKSGKTSLWKTIHLDAMSQDDHAKVV 3729          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7R9W8V5_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8V5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 7.060e-33
Identity = 105/344 (30.52%), Postives = 165/344 (47.97%), Query Frame = 0
Query:    1 MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVD------------INRTNGNVVTLSGSELRVWTVNGRLLASC-SVTALRRGASPTCAVSTECPDW-QDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE-MLAGDSSGEISRWQCIRLDQLSSEELNQLV 329
            +LPS   KY RFGGP+ GVS          S+     +R+LS H+ +H++P++ A  S +G  L+TG  D T R+W       +  G  V     L    G H   +TC  +    G+ V+G A G +LVWD+R  TF+R+L    S + S+             IN  NGN++TL GS + ++ +NG LLA+  S       + P+CAV+T+CP+W ++G+VA TGH NGDV +W + +   +    H   P+ +                                         H   IT +RV    ++ +L GD SG++S  + ++L+ L+ +EL+ +V
Sbjct:  731 ILPSK--KYYRFGGPNNGVSVHVAT----MSARYREVNRVLSIHDGMHRAPISVAKPSLNGLWLVTGCMDSTVRVW-------KYDGHNVKLQATLCGHEGGH---ITCIDVSTTFGTIVSGDADGNILVWDLRTLTFLRQLTSGTSSVLSLSSSAAPEHAVSASINHKNGNILTLVGSRVSLFDINGSLLATHNSEEDFDAHSKPSCAVATDCPEWMEEGIVAVTGHVNGDVRMWGLGYDNKQLIMRH-VIPDKV-----------------------------------------HTCPITAMRVSGDRQDTLLVGDKSGKMSVCKTLQLEALNQQELSVIV 1016          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI41_ECTSI2.380e-10384.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YWR3_9STRA2.750e-7545.32BEACH domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5KXI6_9PHAE9.350e-6281.02BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
W7TSW7_9STRA1.060e-5237.61Wd repeat and fyve domain-containing protein 3 n=2... [more]
A0A7S3Y939_HETAK1.150e-3836.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2WG18_9STRA6.060e-3835.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K0R395_THAOC7.570e-3633.24Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2E6R0_9STRA5.260e-3431.47Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3Q415_9STRA4.730e-3331.58Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9W8V5_9STRA7.060e-3330.52Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 93..132
e-value: 0.64
score: 18.2
coord: 135..173
e-value: 0.37
score: 19.7
coord: 37..77
e-value: 3.9E-6
score: 36.4
coord: 273..313
e-value: 0.77
score: 17.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 48..77
e-value: 1.8E-5
score: 25.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 45..77
score: 11.645
NoneNo IPR availablePANTHERPTHR46108FAMILY NOT NAMEDcoord: 37..314
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 64..78
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 45..182
score: 14.872
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 12..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5827contigL-elsbetiae_contig5827:7822..10862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5827.14267.1mRNA_L-elsbetiae_contig5827.14267.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5827 7544..10892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5827.14267.1 ID=prot_L-elsbetiae_contig5827.14267.1|Name=mRNA_L-elsbetiae_contig5827.14267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp
MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQS
PVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACL
GWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRIS
SVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTE
CPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASP
REARAPSGAGGGGGAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGREM
LAGDSSGEISRWQCIRLDQLSSEELNQLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf