mRNA_L-elsbetiae_contig5827.14267.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5827.14267.1
Unique NamemRNA_L-elsbetiae_contig5827.14267.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: D8LI41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI41_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 1.050e-107
Identity = 183/217 (84.33%), Postives = 195/217 (89.86%), Query Frame = 1
Query:    1 KIAGVGIGAVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGG-GQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQD 648
            KIAGVG+GA+MLP SPDKY+RFGGPSRGVSFFQTAG G ASSSKA PDRLLSSHE+LH + VTAAACS DG+LLLTGA DGTCRLW+ V L SRS G GQVSRMLDLAA LG H GPVTCA++CMGSGSAVTGGA GKVLVWDIRRK FVRELPGHRS ISSV+IN+TNGNVVTLSGSELRVW VNGRLLASCSVTALRRGA PTCAVST CPDWQ+
Sbjct: 1153 KIAGVGVGAIMLPKSPDKYLRFGGPSRGVSFFQTAGGGTASSSKATPDRLLSSHESLHLTAVTAAACSVDGSLLLTGALDGTCRLWSVVTLQSRSSGLGQVSRMLDLAASLGRHAGPVTCATVCMGSGSAVTGGADGKVLVWDIRRKNFVRELPGHRSGISSVEINKTNGNVVTLSGSELRVWNVNGRLLASCSVTALRRGAPPTCAVSTNCPDWQE 1369          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A835YWR3_9STRA (BEACH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWR3_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.340e-74
Identity = 153/348 (43.97%), Postives = 198/348 (56.90%), Query Frame = 1
Query:    1 KIAGVGIGAVMLPS-SPDKYVRFGGPSRGVSFFQTAGFGAASSSK-----AAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGA-SGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLV--RVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017
            ++  VG   ++ P+   D+YVRFGGPS GV+F+Q                AAPD LLS+H+ LH  P+T AA ++ GA L TG  DG  R+W SVA    +GGG   R L+L   L  H G V C   C   G  V+GGA   +VLVWD+ R  F+RELPGHR R+++V +NR  G  VTL+ +ELRVW VNG LLA  S  A +R + PT A++T CP WQ+GVVA TGHDNGDV LW I+W G                 G          +G            + P  LV  RVL+GAH + +T VRVC+  RE+L GD+ G +SRWQC+RL  +S  EL +L+
Sbjct:  350 RVVMVGTRCLLCPAPGSDEYVRFGGPSCGVAFYQIGXXXXXXXXXXXXXXAAPDALLSAHDGLHARPITCAAYADSGAALATGGGDGALRVW-SVAPSYYAGGG---RTLELRGTLAAHAGAVACVDACEPFGVLVSGGACDARVLVWDLNRLAFLRELPGHRGRVTAVSVNRATGGAVTLASAELRVWGVNGDLLARWS--AAQRRSLPTVAIATRCPHWQEGVVAVTGHDNGDVSLWGIQWSGAGGXXXXXXXXXXXXXXG----------AGCEETGSIMARTSIPPRDLVCRRVLNGAHTRAVTCVRVCDDQRELLVGDAKGVVSRWQCLRLADMSQGELRELM 681          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A6H5KXI6_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI6_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 4.170e-66
Identity = 118/147 (80.27%), Postives = 129/147 (87.76%), Query Frame = 1
Query:    1 KIAGVGIGAVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGG-GQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRK 438
            +IAGVG+GA+MLP SPDKY+RFGGPSRGVSFFQTAG G ASSSKA PDRLLSSHE+LH + VTA+ACS DG+LLLTGA DGTCRLW+ V LH RS G GQVSRMLDLAA LG H GPVTCA++ MGSGSAVTGGA GKVLVWDIRRK
Sbjct:  168 QIAGVGVGAIMLPKSPDKYLRFGGPSRGVSFFQTAGGGTASSSKATPDRLLSSHESLHLTAVTASACSVDGSLLLTGALDGTCRLWSVVTLHGRSSGLGQVSRMLDLAASLGRHAGPVTCATVGMGSGSAVTGGADGKVLVWDIRRK 314          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: W7TSW7_9STRA (Wd repeat and fyve domain-containing protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSW7_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.650e-53
Identity = 135/359 (37.60%), Postives = 186/359 (51.81%), Query Frame = 1
Query:   10 GVGIGAVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWN---------SVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGA---GXXXXAGPVDDV-----------RPLKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017
            GVG+  +++P S  KY R+G P  G++F         ++     DR++S HE LH  PV   A  E G L +TG+ D T R+W+            L+S +GGG   + L L A L  H   V C  +    G  ++GGA    +VWD+R  T  R L GH + + SV IN+  G++VTL G ++RVW+V G LLA  S  A+ +   PTCAV+T CP+W +GVVA TGHDNG + LW +        S   A     R    A  RE RA  G         AGP  +V           R LK++++L G H   IT +RV +  R + AGD++G+ SRW  +RLDQ+   EL QL 
Sbjct: 3820 GVGLDCLLVPPSLVKYARYGSPDNGLAFRVAI----PTTRHQYVDRVVSVHEQLHLGPVNCLALDEAGELAVTGSLDSTLRVWSLAKHNASAPPTQLYSNAGGG--GKTLSLQATLCGHSSEVLCVDVAAELGILLSGGADRVAVVWDVRDFTSQRLLVGHAAPVISVSINKLTGDMVTLGGVDVRVWSVTGELLAQVSAIAVVKEV-PTCAVATGCPEWLNGVVAVTGHDNGKLCLWGLH-----HLSDDEAGQRLDRGASAAGAREERAWRGGKCMDGDDLAGPGAEVDLGSNTGTTQGRQLKVMQILQGIHTAAITAIRVGKDQRGVTAGDATGKCSRWTSMRLDQMPERELVQLT 4166          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S2WG18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WG18_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.850e-38
Identity = 122/354 (34.46%), Postives = 168/354 (47.46%), Query Frame = 1
Query:    1 KIAGVGIGAVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRR--GASPTCAVSTECPDWQ-DGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPRE---ARAPSGAGXXXXAGPVDDVRPLKLVRVLS---------GAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017
            +I GVG   V L       V FGG   G+    T     A   K  P  L    E LH  PV+     ED + L+TG+ DGT R+W+ V        G      +L A L  H   V     C G G  V+GG    V VWD+    F+R L  H   ++SV +N + G+++TL+G EL + TVNG L+A  S+  + R  G  PTC VST C +W    +VAA GHDNG V LWSI+     R S   +     +    AS +    A A +GAG    A  V+  R     R             A +  +T +RV   G ++L GD++G + RW  +RLDQLS+++L  ++
Sbjct:  240 RIVGVGENCVFLGRQGRGVVTFGGFDCGIVVHPTIQAQRARE-KDRPRHL----EQLHHQPVSCVTVCEDSSWLVTGSFDGTIRIWSFVRR------GLPHSSAELRATLCGHGDAVRSLDACPGYGIVVSGGVDSLVNVWDLHSGQFLRSLSSHSIPVTSVSVNTSTGDILTLAGFELCLHTVNGVLIAMSSLANVPRVMGHPPTCMVSTHCCEWPAHSIVAAVGHDNGAVTLWSIQRHEKGRDSGRFSQTASAQDQASASDQRCENALAEAGAGGKEPA-VVESARHAVQCRAFELRQYLTPNEEAGKHAVTALRVANRGSDLLVGDAAGTLRRWTALRLDQLSTDDLKTVL 581          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S3Y939_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y939_HETAK)

HSP 1 Score: 146 bits (369), Expect = 8.310e-38
Identity = 90/244 (36.89%), Postives = 137/244 (56.15%), Query Frame = 1
Query:  310 LDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRP--------LKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017
            L L A L  H G VT  +L +  G  V+GG   + ++WD  R  F+R+L  H   + SV IN++ G+VVTL G +LRV++VNG LLA+   T+LRR   PT AV+T+CP WQ+G++A  GH NGDV LW+I+         H    +P+ ++ G  P++    +            +  P        L+L + L+  H+ +IT +++  G +E+L GD +G ISRW   R+DQL   E ++L+
Sbjct:    5 LRLRAVLCGHEGAVTAVALSLRHGRVVSGGLDRRAILWDAVRHCFLRQLGWHPGPLQSVSINQSTGDVVTLGGGDLRVYSVNGDLLAA--NTSLRRD-MPTKAVATDCPYWQNGIIAVVGHQNGDVTLWTID---------HN---QPMTQIQG-DPQDQEGTANVYSDDFHDAASNTIPAQFSVPKQLQLKKHLTSVHRSKITCIKIFSG-QEILVGDYNGVISRWSSFRIDQLKPHEQHELL 231          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: K0R395_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R395_THAOC)

HSP 1 Score: 151 bits (382), Expect = 6.260e-36
Identity = 119/356 (33.43%), Postives = 167/356 (46.91%), Query Frame = 1
Query:   13 VGIG---AVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSR--------------ISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGAS-PTCAVSTECPDWQD-GVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE--MLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017
            VG+G   A++LPS   KY+R+GGP+ GVS          ++     +++LS H+ +H+ P+T A  S +G  L TG  D T RLW               + + L A L  H G +TC  +    GS ++GGA GK+LVWD+R  TF+REL  H S               + SV IN  NGN+VTL  S L V+ +NG L+A      +  G   P+  +ST CP+W + G+VA TGH NGDV LW I++        H   PE +                                         H   IT +R   G R+  +L GD+SG++S    ++LDQLS EEL  + 
Sbjct: 2035 VGVGKTCALLLPSK--KYIRYGGPNNGVSVHVAV----TTARHREVNKVLSIHDGMHRGPITVAKPSLNGLWLATGGIDSTVRLWK-----------YYGQNMQLQATLCGHCGKITCLDISTTFGSIISGGADGKILVWDLRTLTFLRELK-HTSNAPTAAHAGSSKSFSVKSVSINHKNGNMVTLLLSTLCVFDINGNLVAKQHPDEVFSGNQIPSVVISTNCPEWMELGIVAVTGHMNGDVRLWGIDYENKILLLRH-ILPERV-----------------------------------------HSCPITTLRAT-GERQDTLLIGDASGKMSVCNTVKLDQLSPEELQSIA 2329          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S2E6R0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6R0_9STRA)

HSP 1 Score: 145 bits (367), Expect = 5.450e-34
Identity = 110/349 (31.52%), Postives = 171/349 (49.00%), Query Frame = 1
Query:   13 VGIG---AVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELP-------GHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLA---SCSVTALRRGASPTCAVSTECPDW-QDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017
            +G+G   A++LPS   KY R+GGP+ G+S     G           +R+LS H+ +H++P++    S +G  L++G  D T R+W       +  GG +     L    G   G +TC  +    G  VTGGA G VLVWD+R  TF+R+L        G  + +S V IN+ NGN++TL GS + ++ +NG L+A   S    A++    P+CAV+T+CP+W ++G+VA TGH NGD+ LWSI++        H   P+ +                              P+  +RV+S             +    +L GD SG++S  + + LD L   EL +L+
Sbjct: 1688 IGVGRTCALILPSK--KYYRYGGPNNGISVHHAVG-------GYKENRVLSIHDDMHRAPISVLKPSLNGLWLVSGCMDSTIRVW-------KYDGGNMHLQATLC---GHDNGKITCIDVSTTFGMIVTGGADGNVLVWDLRTLTFMRKLRHPTLKGIGETAAVS-VSINQKNGNIMTLIGSRICLFDINGNLVAKQQSSDEFAIKH--RPSCAVATDCPEWMENGIVAITGHVNGDLRLWSIDYDENILIMRH-LMPDKVHSC---------------------------PITALRVIS-------------DNQHSLLVGDKSGKMSVCKTLSLDSLPQNELQRLL 1973          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S2EG92_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EG92_TRICV)

HSP 1 Score: 143 bits (361), Expect = 2.450e-33
Identity = 115/353 (32.58%), Postives = 170/353 (48.16%), Query Frame = 1
Query:   13 VGIG---AVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVREL-----------PGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASC-SVTALRRGASPTCAVSTECPDWQD-GVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE--MLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017
            VG+G   A++LPS   KY RFG P+ GVS         AS+     +R+LS H+ +H++P+T A  S +G  L+TG  D T R+W       +  G  V     L    G H   VTC  +    G+ VTG A G VLVWD+R  TF+R+L            G      SV IN  NGN++ L GS++ ++ +NG +LA+  S         P+CA++T+CP+W + GVVA TGH NGDV LWS+++        H   P+ +                                         H   IT +RV  G R+  +L GD SG++S  + ++L+ L+ +E++ +V
Sbjct:  580 VGVGKTCALILPSK--KYYRFGSPNNGVSVHVAM----ASARYREVNRVLSIHDGMHRAPITVAKPSLNGLWLVTGCMDSTVRVW-------KYDGHNVKLQATLCGHEGGH---VTCIDVSTTFGTIVTGDADGNVLVWDLRTLTFLRQLRPVDSGGDSSGSGTVEPAISVSINHKNGNILILVGSKVSLFDINGSMLATQDSEDEFESHNRPSCAIATDCPEWMEQGVVAVTGHVNGDVRLWSLDYEEKLLTMRH-LIPDKV-----------------------------------------HSCPITAMRV-SGDRQDTLLVGDKSGKMSVCKTLQLEALNQQEISVIV 873          
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7R9W8V5_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8V5_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.670e-33
Identity = 111/354 (31.36%), Postives = 172/354 (48.59%), Query Frame = 1
Query:   13 VGIG---AVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVD------------INRTNGNVVTLSGSELRVWTVNGRLLASC-SVTALRRGASPTCAVSTECPDW-QDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE--MLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017
            VG+G   A++LPS   KY RFGGP+ GVS          S+     +R+LS H+ +H++P++ A  S +G  L+TG  D T R+W       +  G  V     L    G H   +TC  +    G+ V+G A G +LVWD+R  TF+R+L    S + S+             IN  NGN++TL GS + ++ +NG LLA+  S       + P+CAV+T+CP+W ++G+VA TGH NGDV +W + +   +    H   P+ +                                         H   IT +RV  G R+  +L GD SG++S  + ++L+ L+ +EL+ +V
Sbjct:  722 VGVGKTCALILPSK--KYYRFGGPNNGVSVHVAT----MSARYREVNRVLSIHDGMHRAPISVAKPSLNGLWLVTGCMDSTVRVW-------KYDGHNVKLQATLCGHEGGH---ITCIDVSTTFGTIVSGDADGNILVWDLRTLTFLRQLTSGTSSVLSLSSSAAPEHAVSASINHKNGNILTLVGSRVSLFDINGSLLATHNSEEDFDAHSKPSCAVATDCPEWMEEGIVAVTGHVNGDVRMWGLGYDNKQLIMRH-VIPDKV-----------------------------------------HTCPITAMRV-SGDRQDTLLVGDKSGKMSVCKTLQLEALNQQELSVIV 1016          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI41_ECTSI1.050e-10784.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YWR3_9STRA1.340e-7443.97BEACH domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5KXI6_9PHAE4.170e-6680.27BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
W7TSW7_9STRA1.650e-5337.60Wd repeat and fyve domain-containing protein 3 n=2... [more]
A0A7S2WG18_9STRA3.850e-3834.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Y939_HETAK8.310e-3836.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0R395_THAOC6.260e-3633.43Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2E6R0_9STRA5.450e-3431.52Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2EG92_TRICV2.450e-3332.58Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9W8V5_9STRA2.670e-3331.36Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5827contigL-elsbetiae_contig5827:7544..10892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.3
Seed ortholog evalue5.1e-91
Seed eggNOG ortholog2880.D8LI41
KEGG koko:K22262
Hectar predicted targeting categoryother localisation
EggNOG free text desc.aggrephagy
EggNOG OGsKOG1786@1,KOG1786@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons4
Model size1298
Cds size990
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5827.14267.1prot_L-elsbetiae_contig5827.14267.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5827 7822..10862 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816627.138666-UTR-L-elsbetiae_contig5827:7543..78211622816627.138666-UTR-L-elsbetiae_contig5827:7543..7821Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5827 7544..7821 -
1691683695.4785354-UTR-L-elsbetiae_contig5827:7543..78211691683695.4785354-UTR-L-elsbetiae_contig5827:7543..7821Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5827 7544..7821 -
1622816627.2154834-UTR-L-elsbetiae_contig5827:10862..108921622816627.2154834-UTR-L-elsbetiae_contig5827:10862..10892Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5827 10863..10892 -
1691683695.5370736-UTR-L-elsbetiae_contig5827:10862..108921691683695.5370736-UTR-L-elsbetiae_contig5827:10862..10892Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5827 10863..10892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816627.1545265-CDS-L-elsbetiae_contig5827:7821..81961622816627.1545265-CDS-L-elsbetiae_contig5827:7821..8196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5827 7822..8196 -
1691683695.4910495-CDS-L-elsbetiae_contig5827:7821..81961691683695.4910495-CDS-L-elsbetiae_contig5827:7821..8196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5827 7822..8196 -
1622816627.1720219-CDS-L-elsbetiae_contig5827:9148..93551622816627.1720219-CDS-L-elsbetiae_contig5827:9148..9355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5827 9149..9355 -
1691683695.502821-CDS-L-elsbetiae_contig5827:9148..93551691683695.502821-CDS-L-elsbetiae_contig5827:9148..9355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5827 9149..9355 -
1622816627.188828-CDS-L-elsbetiae_contig5827:9880..100211622816627.188828-CDS-L-elsbetiae_contig5827:9880..10021Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5827 9881..10021 -
1691683695.5118442-CDS-L-elsbetiae_contig5827:9880..100211691683695.5118442-CDS-L-elsbetiae_contig5827:9880..10021Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5827 9881..10021 -
1622816627.2019575-CDS-L-elsbetiae_contig5827:10595..108621622816627.2019575-CDS-L-elsbetiae_contig5827:10595..10862Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5827 10596..10862 -
1691683695.5253801-CDS-L-elsbetiae_contig5827:10595..108621691683695.5253801-CDS-L-elsbetiae_contig5827:10595..10862Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5827 10596..10862 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5827.14267.1

>prot_L-elsbetiae_contig5827.14267.1 ID=prot_L-elsbetiae_contig5827.14267.1|Name=mRNA_L-elsbetiae_contig5827.14267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp
MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQS
PVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACL
GWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRIS
SVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTE
CPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASP
REARAPSGAGGGGGAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGREM
LAGDSSGEISRWQCIRLDQLSSEELNQLV*
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mRNA from alignment at L-elsbetiae_contig5827:7544..10892-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5827.14267.1 ID=mRNA_L-elsbetiae_contig5827.14267.1|Name=mRNA_L-elsbetiae_contig5827.14267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3349bp|location=Sequence derived from alignment at L-elsbetiae_contig5827:7544..10892- (Laminarionema elsbetiae ELsaHSoW15)
AAGATTGCCGGCGTTGGCATCGGGGCCGTCATGCTCCCCAGTTCCCCCGA CAAGTACGTCCGCTTCGGCGGCCCCAGCCGCGGCGTCTCCTTCTTCCAGA CGGCCGGCTTCGGCGCGGCCTCGTCCTCCAAGGCCGCGCCGGACCGGCTG CTGTCCTCGCACGAGGCGCTGCACCAGTCGCCGGTCACGGCCGCGGCCTG CTCGGAGGACGGGGCGCTGCTGCTCACGGGGGCGTCCGATGGCACCTGCC GGCTGTGGAACTCGGTCGCACTCCACAGCCGATCGGGCGGGGGTCAGGTA TGTTTGTAGATACCTTACTTTTTTTTTTTTTTTTAGGTATGTTCGTTTAT ACATATTTTGAAGTTTGTATGTGTGTGGGTGTATTTACTGCTGTTGTTGG CTATACTCACTCACTCGCCTCGCCCTCTTGACCGCCGATGTACTGTTTTA TCAAAACCAGTGCAAAGCGCCGCGATGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTTCGTCGCTTTTTTTCTTCGGTGTGCAAACGTGCTATTTTAGC GCGCGCAAGCCTTCTTTTTTTTTGTGCTTTGGGGAACCTTCGGGTCCATT TTATTTATTTTCTTTTCCCAGTATTTACACATTTTTAGGGTAAGTTATCC TGTGGCCACAGGAATCGACCGCACCGATCGCGTCAGTGTTGGATTGGTAC GGACGGGCTCATGGAGGTGTACTGGATAGAGAGACCGGAACGGTTTTTAA TGGGAAGACAACAAGCGTACAAACCCCCCAACCCTAACCCCGTGCGCCGT GACTCTGTCTGTCCATCTGTCTGTCACTGTCTGTCTGTCTATCTTCCGCC ATGAAACGATGATGGAAAAAGGTGTCGAGGATGTTGGATCTGGCGGCTTG TCTGGGCTGGCACCCGGGTCCCGTGACGTGCGCGAGCTTGTGCATGGGCA GCGGGAGCGCGGTCACCGGCGGGGCGAGCGGAAAGGTCCTGGTGTGGGAC ATCAGGAGAAAGGTGCGTATCTATCTGTGCGTGTGGTGCATGTGGTGCAC ACATACATATATAGGTACATGCATATCTACAGAATGAGTCACGCGAGTGC ATGCATTTGTTCGGCGTGGTTGACTCGCAGTGCGTCCGAATTGCCCACGG TCAGGAGATCTCCCTCTGGTTGATTGACAGTCTGCGGTACAATTTGTCGT GCCGTTATTGTGAGTATGTAGGTCGGGGTTTGTGCTGCGGTGTCTCTATG GCAATCGCGTGTCGATTGTGTTCGTCAAACGATAATAATACATGCGCCCA GCCAGCCGTTCCCTGCTTCGTCCCAAGCGTACGCGCGTGTCACAAAAGGG TTTGCATTCCTCTCTCTCTCTCCCTCTCTCTCTCTCTCCCTCCATCTCAT CTTTTCTTTGGCAGGCGAAGCACGCAACCCCTCACCCGCCTTTCCCCTCT CTCTCTCGCTGTTTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCGCGTG CTCTCTCCTTTTCATGTCTTAATTAACCCCAAACCAGACTTTCGTGCGCG AGCTCCCTGGGCACCGTAGCCGCATTTCCTCGGTGGACATCAACAGGACG AACGGCAACGTGGTGACACTCTCCGGGTCGGAACTGAGGGTGTGGACGGT CAACGGGCGGCTGCTGGCGTCGTGCTCCGTCACCGCGCTCAGGCGGGGGG CGTCCCCCACGTGCGCCGTGTCCACGGAATGCCCCGACTGGCAGGTAGGT TCCTACTCCCCCCCCCCCCCCCCCTGTTTTCCACCGACCGCACGCAGCCT CTCTTCTCTCGCTTGTTGGTTCCGTAGATAGATTCGATGGCGTGCGCTCT GCTTGTTCGAAAAAGGGGGGAAACAGAGGGGGGTGGCCTAATGGCCTAAT TGGAGCTTTTTTTTTTTGGATTATTTTTTTCTTCGTGTGTGTGTGTGTGT TTTTTTTTTACCTTCGTGTTTTGACCATGATTTTGTTCGTGTTTCAGTGT CCCTTCTTTCTCTTCCGATCGTGGGCTGGGGATGGAGGAGAGCAGAGCTA CCTAGCTGTCGGAACGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTAAATT ACCTGGTTTTATCAAACCGCCGAACCCCCCCAAAAAGCGTCGGAATTTGT CGTGGTGTGGCTGTGTTGGGGAGTGGCTGCGCTTGGATAGATTTCACTGG CGGGGAGGCATCTGGAGCAGAGTTGTGCGGGGCGAACCCGATGCTACTAG AATACCTACCTGAAAAAGTATGTACATACATGCGTTGAGTCTTTTGAAAC CCCAAAGTTCCGTGCCGTCTCCTCTCTTACATTGTTTCACACACTTGGGG ACAAACAACGCGCGCTTGCACACCCACCTTCCTTCCTCCTTTCGCCGCAA GCCATCTTAAAATTGTGTGAGTATATCTTGGGATGGAAAAGAGGGGGTTA GTATGCCTACAACAGATCCCTCTGGAACGATATTTTCACAGACCGGACGT AGACTGCTGACATTTGTATACATTAATTAAAATTCCACACTGGCGCTGCT CTCTCACCCCCCCCCCCCCCGGCGGCCCTGGCTGGCGTTTGCGTGGCACT CTCGTCGTTCGCCAACGAATTCCACCGGTCAATATGTATACATATGTGTG CCAAAATTGTGTCTGCGCGTTTGTGCCTATCTATCTATCTATCCAGGACG GCGTCGTGGCGGCAACCGGGCACGACAACGGCGACGTGCTCTTGTGGAGC ATCGAGTGGGGCGGCGGGCGGCGAGCATCCTCGCATCGCGCCGCGCCGGA GCCGATCCGGCGCCTCGGCGGCGCGAGTCCCAGAGAAGCGAGAGCTCCCA GCGGTGCCGGCGGCGGCGGCGGAGCGGGCCCGGTGGACGACGTGCGCCCG CTGAAGCTGGTGCGCGTGCTGAGCGGGGCCCACCAGAAGCGGATCACGTT CGTCCGGGTGTGCGAGGGCGGGCGGGAGATGCTGGCGGGAGACTCGTCGG GGGAGATCTCGCGCTGGCAGTGCATCCGCCTCGACCAGCTATCCTCCGAG GAGCTAAACCAGCTCGTGTAGAGTAAGTGGTAGCCTTGTACTTGGGGCTC GCTTAGCTTAGCTTAGCTTAGCTTCAGCCTTCGTCCAACGCGCGGCCTGC TCGATCTCGTGTGGGACGGGGCGTAGGTTTTTTAGTGGAAGAATTGTCGT TTTGTATTGTTGGATGCATAGATATCTAACGCGTGTTTCTTTTTCTGTGA TGCCAAGCAGTGGGAGCGGTATATAGACTACAGGGTTAGTCCAGTCTTGA TTGGTGGTCGTTTGTTTTATTTATATGGTGTTGTTCGATGTAATTTTTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5827:7544..10892-

>mRNA_L-elsbetiae_contig5827.14267.1 ID=mRNA_L-elsbetiae_contig5827.14267.1|Name=mRNA_L-elsbetiae_contig5827.14267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig5827:7544..10892- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCCCCAGTTCCCCCGACAAGTACGTCCGCTTCGGCGGCCCCAGCCG
CGGCGTCTCCTTCTTCCAGACGGCCGGCTTCGGCGCGGCCTCGTCCTCCA
AGGCCGCGCCGGACCGGCTGCTGTCCTCGCACGAGGCGCTGCACCAGTCG
CCGGTCACGGCCGCGGCCTGCTCGGAGGACGGGGCGCTGCTGCTCACGGG
GGCGTCCGATGGCACCTGCCGGCTGTGGAACTCGGTCGCACTCCACAGCC
GATCGGGCGGGGGTCAGATGCTCCCCAGTTCCCCCGACAAGTACGTCCGC
TTCGGCGGCCCCAGCCGCGGCGTCTCCTTCTTCCAGACGGCCGGCTTCGG
CGCGGCCTCGTCCTCCAAGGCCGCGCCGGACCGGCTGCTGTCCTCGCACG
AGGCGCTGCACCAGTCGCCGGTCACGGCCGCGGCCTGCTCGGAGGACGGG
GCGCTGCTGCTCACGGGGGCGTCCGATGGCACCTGCCGGCTGTGGAACTC
GGTCGCACTCCACAGCCGATCGGGCGGGGGTCAGGTGTCGAGGATGTTGG
ATCTGGCGGCTTGTCTGGGCTGGCACCCGGGTCCCGTGACGTGCGCGAGC
TTGTGCATGGGCAGCGGGAGCGCGGTCACCGGCGGGGCGAGCGGAAAGGT
CCTGGTGTGGGACATCAGGAGAAAGGTGTCGAGGATGTTGGATCTGGCGG
CTTGTCTGGGCTGGCACCCGGGTCCCGTGACGTGCGCGAGCTTGTGCATG
GGCAGCGGGAGCGCGGTCACCGGCGGGGCGAGCGGAAAGGTCCTGGTGTG
GGACATCAGGAGAAAGACTTTCGTGCGCGAGCTCCCTGGGCACCGTAGCC
GCATTTCCTCGGTGGACATCAACAGGACGAACGGCAACGTGGTGACACTC
TCCGGGTCGGAACTGAGGGTGTGGACGGTCAACGGGCGGCTGCTGGCGTC
GTGCTCCGTCACCGCGCTCAGGCGGGGGGCGTCCCCCACGTGCGCCGTGT
CCACGGAATGCCCCGACTGGCAGACTTTCGTGCGCGAGCTCCCTGGGCAC
CGTAGCCGCATTTCCTCGGTGGACATCAACAGGACGAACGGCAACGTGGT
GACACTCTCCGGGTCGGAACTGAGGGTGTGGACGGTCAACGGGCGGCTGC
TGGCGTCGTGCTCCGTCACCGCGCTCAGGCGGGGGGCGTCCCCCACGTGC
GCCGTGTCCACGGAATGCCCCGACTGGCAGGACGGCGTCGTGGCGGCAAC
CGGGCACGACAACGGCGACGTGCTCTTGTGGAGCATCGAGTGGGGCGGCG
GGCGGCGAGCATCCTCGCATCGCGCCGCGCCGGAGCCGATCCGGCGCCTC
GGCGGCGCGAGTCCCAGAGAAGCGAGAGCTCCCAGCGGTGCCGGCGGCGG
CGGCGGAGCGGGCCCGGTGGACGACGTGCGCCCGCTGAAGCTGGTGCGCG
TGCTGAGCGGGGCCCACCAGAAGCGGATCACGTTCGTCCGGGTGTGCGAG
GGCGGGCGGGAGATGCTGGCGGGAGACTCGTCGGGGGAGATCTCGCGCTG
GCAGTGCATCCGCCTCGACCAGCTATCCTCCGAGGAGCTAAACCAGCTCG
TGTAGGACGGCGTCGTGGCGGCAACCGGGCACGACAACGGCGACGTGCTC
TTGTGGAGCATCGAGTGGGGCGGCGGGCGGCGAGCATCCTCGCATCGCGC
CGCGCCGGAGCCGATCCGGCGCCTCGGCGGCGCGAGTCCCAGAGAAGCGA
GAGCTCCCAGCGGTGCCGGCGGCGGCGGCGGAGCGGGCCCGGTGGACGAC
GTGCGCCCGCTGAAGCTGGTGCGCGTGCTGAGCGGGGCCCACCAGAAGCG
GATCACGTTCGTCCGGGTGTGCGAGGGCGGGCGGGAGATGCTGGCGGGAG
ACTCGTCGGGGGAGATCTCGCGCTGGCAGTGCATCCGCCTCGACCAGCTA
TCCTCCGAGGAGCTAAACCAGCTCGTGTAG
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