mRNA_L-elsbetiae_contig5827.14267.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: D8LI41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI41_ECTSI) HSP 1 Score: 356 bits (913), Expect = 1.050e-107 Identity = 183/217 (84.33%), Postives = 195/217 (89.86%), Query Frame = 1 Query: 1 KIAGVGIGAVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGG-GQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQD 648 KIAGVG+GA+MLP SPDKY+RFGGPSRGVSFFQTAG G ASSSKA PDRLLSSHE+LH + VTAAACS DG+LLLTGA DGTCRLW+ V L SRS G GQVSRMLDLAA LG H GPVTCA++CMGSGSAVTGGA GKVLVWDIRRK FVRELPGHRS ISSV+IN+TNGNVVTLSGSELRVW VNGRLLASCSVTALRRGA PTCAVST CPDWQ+ Sbjct: 1153 KIAGVGVGAIMLPKSPDKYLRFGGPSRGVSFFQTAGGGTASSSKATPDRLLSSHESLHLTAVTAAACSVDGSLLLTGALDGTCRLWSVVTLQSRSSGLGQVSRMLDLAASLGRHAGPVTCATVCMGSGSAVTGGADGKVLVWDIRRKNFVRELPGHRSGISSVEINKTNGNVVTLSGSELRVWNVNGRLLASCSVTALRRGAPPTCAVSTNCPDWQE 1369
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A835YWR3_9STRA (BEACH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWR3_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.340e-74 Identity = 153/348 (43.97%), Postives = 198/348 (56.90%), Query Frame = 1 Query: 1 KIAGVGIGAVMLPS-SPDKYVRFGGPSRGVSFFQTAGFGAASSSK-----AAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGA-SGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLV--RVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017 ++ VG ++ P+ D+YVRFGGPS GV+F+Q AAPD LLS+H+ LH P+T AA ++ GA L TG DG R+W SVA +GGG R L+L L H G V C C G V+GGA +VLVWD+ R F+RELPGHR R+++V +NR G VTL+ +ELRVW VNG LLA S A +R + PT A++T CP WQ+GVVA TGHDNGDV LW I+W G G +G + P LV RVL+GAH + +T VRVC+ RE+L GD+ G +SRWQC+RL +S EL +L+ Sbjct: 350 RVVMVGTRCLLCPAPGSDEYVRFGGPSCGVAFYQIGXXXXXXXXXXXXXXAAPDALLSAHDGLHARPITCAAYADSGAALATGGGDGALRVW-SVAPSYYAGGG---RTLELRGTLAAHAGAVACVDACEPFGVLVSGGACDARVLVWDLNRLAFLRELPGHRGRVTAVSVNRATGGAVTLASAELRVWGVNGDLLARWS--AAQRRSLPTVAIATRCPHWQEGVVAVTGHDNGDVSLWGIQWSGAGGXXXXXXXXXXXXXXG----------AGCEETGSIMARTSIPPRDLVCRRVLNGAHTRAVTCVRVCDDQRELLVGDAKGVVSRWQCLRLADMSQGELRELM 681
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A6H5KXI6_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI6_9PHAE) HSP 1 Score: 223 bits (569), Expect = 4.170e-66 Identity = 118/147 (80.27%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 1 KIAGVGIGAVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGG-GQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRK 438 +IAGVG+GA+MLP SPDKY+RFGGPSRGVSFFQTAG G ASSSKA PDRLLSSHE+LH + VTA+ACS DG+LLLTGA DGTCRLW+ V LH RS G GQVSRMLDLAA LG H GPVTCA++ MGSGSAVTGGA GKVLVWDIRRK Sbjct: 168 QIAGVGVGAIMLPKSPDKYLRFGGPSRGVSFFQTAGGGTASSSKATPDRLLSSHESLHLTAVTASACSVDGSLLLTGALDGTCRLWSVVTLHGRSSGLGQVSRMLDLAASLGRHAGPVTCATVGMGSGSAVTGGADGKVLVWDIRRK 314
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: W7TSW7_9STRA (Wd repeat and fyve domain-containing protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSW7_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.650e-53 Identity = 135/359 (37.60%), Postives = 186/359 (51.81%), Query Frame = 1 Query: 10 GVGIGAVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWN---------SVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGA---GXXXXAGPVDDV-----------RPLKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017 GVG+ +++P S KY R+G P G++F ++ DR++S HE LH PV A E G L +TG+ D T R+W+ L+S +GGG + L L A L H V C + G ++GGA +VWD+R T R L GH + + SV IN+ G++VTL G ++RVW+V G LLA S A+ + PTCAV+T CP+W +GVVA TGHDNG + LW + S A R A RE RA G AGP +V R LK++++L G H IT +RV + R + AGD++G+ SRW +RLDQ+ EL QL Sbjct: 3820 GVGLDCLLVPPSLVKYARYGSPDNGLAFRVAI----PTTRHQYVDRVVSVHEQLHLGPVNCLALDEAGELAVTGSLDSTLRVWSLAKHNASAPPTQLYSNAGGG--GKTLSLQATLCGHSSEVLCVDVAAELGILLSGGADRVAVVWDVRDFTSQRLLVGHAAPVISVSINKLTGDMVTLGGVDVRVWSVTGELLAQVSAIAVVKEV-PTCAVATGCPEWLNGVVAVTGHDNGKLCLWGLH-----HLSDDEAGQRLDRGASAAGAREERAWRGGKCMDGDDLAGPGAEVDLGSNTGTTQGRQLKVMQILQGIHTAAITAIRVGKDQRGVTAGDATGKCSRWTSMRLDQMPERELVQLT 4166
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S2WG18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WG18_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.850e-38 Identity = 122/354 (34.46%), Postives = 168/354 (47.46%), Query Frame = 1 Query: 1 KIAGVGIGAVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRR--GASPTCAVSTECPDWQ-DGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPRE---ARAPSGAGXXXXAGPVDDVRPLKLVRVLS---------GAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017 +I GVG V L V FGG G+ T A K P L E LH PV+ ED + L+TG+ DGT R+W+ V G +L A L H V C G G V+GG V VWD+ F+R L H ++SV +N + G+++TL+G EL + TVNG L+A S+ + R G PTC VST C +W +VAA GHDNG V LWSI+ R S + + AS + A A +GAG A V+ R R A + +T +RV G ++L GD++G + RW +RLDQLS+++L ++ Sbjct: 240 RIVGVGENCVFLGRQGRGVVTFGGFDCGIVVHPTIQAQRARE-KDRPRHL----EQLHHQPVSCVTVCEDSSWLVTGSFDGTIRIWSFVRR------GLPHSSAELRATLCGHGDAVRSLDACPGYGIVVSGGVDSLVNVWDLHSGQFLRSLSSHSIPVTSVSVNTSTGDILTLAGFELCLHTVNGVLIAMSSLANVPRVMGHPPTCMVSTHCCEWPAHSIVAAVGHDNGAVTLWSIQRHEKGRDSGRFSQTASAQDQASASDQRCENALAEAGAGGKEPA-VVESARHAVQCRAFELRQYLTPNEEAGKHAVTALRVANRGSDLLVGDAAGTLRRWTALRLDQLSTDDLKTVL 581
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S3Y939_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y939_HETAK) HSP 1 Score: 146 bits (369), Expect = 8.310e-38 Identity = 90/244 (36.89%), Postives = 137/244 (56.15%), Query Frame = 1 Query: 310 LDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGASPTCAVSTECPDWQDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRP--------LKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017 L L A L H G VT +L + G V+GG + ++WD R F+R+L H + SV IN++ G+VVTL G +LRV++VNG LLA+ T+LRR PT AV+T+CP WQ+G++A GH NGDV LW+I+ H +P+ ++ G P++ + + P L+L + L+ H+ +IT +++ G +E+L GD +G ISRW R+DQL E ++L+ Sbjct: 5 LRLRAVLCGHEGAVTAVALSLRHGRVVSGGLDRRAILWDAVRHCFLRQLGWHPGPLQSVSINQSTGDVVTLGGGDLRVYSVNGDLLAA--NTSLRRD-MPTKAVATDCPYWQNGIIAVVGHQNGDVTLWTID---------HN---QPMTQIQG-DPQDQEGTANVYSDDFHDAASNTIPAQFSVPKQLQLKKHLTSVHRSKITCIKIFSG-QEILVGDYNGVISRWSSFRIDQLKPHEQHELL 231
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: K0R395_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R395_THAOC) HSP 1 Score: 151 bits (382), Expect = 6.260e-36 Identity = 119/356 (33.43%), Postives = 167/356 (46.91%), Query Frame = 1 Query: 13 VGIG---AVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSR--------------ISSVDINRTNGNVVTLSGSELRVWTVNGRLLASCSVTALRRGAS-PTCAVSTECPDWQD-GVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE--MLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017 VG+G A++LPS KY+R+GGP+ GVS ++ +++LS H+ +H+ P+T A S +G L TG D T RLW + + L A L H G +TC + GS ++GGA GK+LVWD+R TF+REL H S + SV IN NGN+VTL S L V+ +NG L+A + G P+ +ST CP+W + G+VA TGH NGDV LW I++ H PE + H IT +R G R+ +L GD+SG++S ++LDQLS EEL + Sbjct: 2035 VGVGKTCALLLPSK--KYIRYGGPNNGVSVHVAV----TTARHREVNKVLSIHDGMHRGPITVAKPSLNGLWLATGGIDSTVRLWK-----------YYGQNMQLQATLCGHCGKITCLDISTTFGSIISGGADGKILVWDLRTLTFLRELK-HTSNAPTAAHAGSSKSFSVKSVSINHKNGNMVTLLLSTLCVFDINGNLVAKQHPDEVFSGNQIPSVVISTNCPEWMELGIVAVTGHMNGDVRLWGIDYENKILLLRH-ILPERV-----------------------------------------HSCPITTLRAT-GERQDTLLIGDASGKMSVCNTVKLDQLSPEELQSIA 2329
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S2E6R0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6R0_9STRA) HSP 1 Score: 145 bits (367), Expect = 5.450e-34 Identity = 110/349 (31.52%), Postives = 171/349 (49.00%), Query Frame = 1 Query: 13 VGIG---AVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELP-------GHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLA---SCSVTALRRGASPTCAVSTECPDW-QDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGREMLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017 +G+G A++LPS KY R+GGP+ G+S G +R+LS H+ +H++P++ S +G L++G D T R+W + GG + L G G +TC + G VTGGA G VLVWD+R TF+R+L G + +S V IN+ NGN++TL GS + ++ +NG L+A S A++ P+CAV+T+CP+W ++G+VA TGH NGD+ LWSI++ H P+ + P+ +RV+S + +L GD SG++S + + LD L EL +L+ Sbjct: 1688 IGVGRTCALILPSK--KYYRYGGPNNGISVHHAVG-------GYKENRVLSIHDDMHRAPISVLKPSLNGLWLVSGCMDSTIRVW-------KYDGGNMHLQATLC---GHDNGKITCIDVSTTFGMIVTGGADGNVLVWDLRTLTFMRKLRHPTLKGIGETAAVS-VSINQKNGNIMTLIGSRICLFDINGNLVAKQQSSDEFAIKH--RPSCAVATDCPEWMENGIVAITGHVNGDLRLWSIDYDENILIMRH-LMPDKVHSC---------------------------PITALRVIS-------------DNQHSLLVGDKSGKMSVCKTLSLDSLPQNELQRLL 1973
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7S2EG92_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EG92_TRICV) HSP 1 Score: 143 bits (361), Expect = 2.450e-33 Identity = 115/353 (32.58%), Postives = 170/353 (48.16%), Query Frame = 1 Query: 13 VGIG---AVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVREL-----------PGHRSRISSVDINRTNGNVVTLSGSELRVWTVNGRLLASC-SVTALRRGASPTCAVSTECPDWQD-GVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE--MLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017 VG+G A++LPS KY RFG P+ GVS AS+ +R+LS H+ +H++P+T A S +G L+TG D T R+W + G V L G H VTC + G+ VTG A G VLVWD+R TF+R+L G SV IN NGN++ L GS++ ++ +NG +LA+ S P+CA++T+CP+W + GVVA TGH NGDV LWS+++ H P+ + H IT +RV G R+ +L GD SG++S + ++L+ L+ +E++ +V Sbjct: 580 VGVGKTCALILPSK--KYYRFGSPNNGVSVHVAM----ASARYREVNRVLSIHDGMHRAPITVAKPSLNGLWLVTGCMDSTVRVW-------KYDGHNVKLQATLCGHEGGH---VTCIDVSTTFGTIVTGDADGNVLVWDLRTLTFLRQLRPVDSGGDSSGSGTVEPAISVSINHKNGNILILVGSKVSLFDINGSMLATQDSEDEFESHNRPSCAIATDCPEWMEQGVVAVTGHVNGDVRLWSLDYEEKLLTMRH-LIPDKV-----------------------------------------HSCPITAMRV-SGDRQDTLLVGDKSGKMSVCKTLQLEALNQQEISVIV 873
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Match: A0A7R9W8V5_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8V5_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.670e-33 Identity = 111/354 (31.36%), Postives = 172/354 (48.59%), Query Frame = 1 Query: 13 VGIG---AVMLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSPVTAAACSEDGALLLTGASDGTCRLWNSVALHSRSGGGQVSRMLDLAACLGWHPGPVTCASLCMGSGSAVTGGASGKVLVWDIRRKTFVRELPGHRSRISSVD------------INRTNGNVVTLSGSELRVWTVNGRLLASC-SVTALRRGASPTCAVSTECPDW-QDGVVAATGHDNGDVLLWSIEWGGGRRASSHRAAPEPIRRLGGASPREARAPSGAGXXXXAGPVDDVRPLKLVRVLSGAHQKRITFVRVCEGGRE--MLAGDSSGEISRWQCIRLDQLSSEELNQLV 1017 VG+G A++LPS KY RFGGP+ GVS S+ +R+LS H+ +H++P++ A S +G L+TG D T R+W + G V L G H +TC + G+ V+G A G +LVWD+R TF+R+L S + S+ IN NGN++TL GS + ++ +NG LLA+ S + P+CAV+T+CP+W ++G+VA TGH NGDV +W + + + H P+ + H IT +RV G R+ +L GD SG++S + ++L+ L+ +EL+ +V Sbjct: 722 VGVGKTCALILPSK--KYYRFGGPNNGVSVHVAT----MSARYREVNRVLSIHDGMHRAPISVAKPSLNGLWLVTGCMDSTVRVW-------KYDGHNVKLQATLCGHEGGH---ITCIDVSTTFGTIVSGDADGNILVWDLRTLTFLRQLTSGTSSVLSLSSSAAPEHAVSASINHKNGNILTLVGSRVSLFDINGSLLATHNSEEDFDAHSKPSCAVATDCPEWMEEGIVAVTGHVNGDVRMWGLGYDNKQLIMRH-VIPDKV-----------------------------------------HTCPITAMRV-SGDRQDTLLVGDKSGKMSVCKTLQLEALNQQELSVIV 1016 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5827.14267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5827.14267.1 >prot_L-elsbetiae_contig5827.14267.1 ID=prot_L-elsbetiae_contig5827.14267.1|Name=mRNA_L-elsbetiae_contig5827.14267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp MLPSSPDKYVRFGGPSRGVSFFQTAGFGAASSSKAAPDRLLSSHEALHQSback to top mRNA from alignment at L-elsbetiae_contig5827:7544..10892- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5827.14267.1 ID=mRNA_L-elsbetiae_contig5827.14267.1|Name=mRNA_L-elsbetiae_contig5827.14267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3349bp|location=Sequence derived from alignment at L-elsbetiae_contig5827:7544..10892- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5827:7544..10892- >mRNA_L-elsbetiae_contig5827.14267.1 ID=mRNA_L-elsbetiae_contig5827.14267.1|Name=mRNA_L-elsbetiae_contig5827.14267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig5827:7544..10892- (Laminarionema elsbetiae ELsaHSoW15)back to top |