prot_L-elsbetiae_contig5819.14256.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5819.14256.1
Unique Nameprot_L-elsbetiae_contig5819.14256.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length401
Homology
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BLAST of mRNA_L-elsbetiae_contig5819.14256.1 vs. uniprot
Match: D7FHK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK6_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 2.460e-182
Identity = 291/379 (76.78%), Postives = 321/379 (84.70%), Query Frame = 0 
Query:   23 QAWAMLEDERADVRRDDQSPSRKRADA--ARKAQLEAESGTA--ILNPDLAARVSGLLLPSAVTLLEALVASSRLEKAMESQQGAVCQCMGQAVAQMPVQGGVRFAAYRSMAVIIRYIKPERAAASLGVPILPLLFNEALLALGNRVSLHPLNTRKESSKGNKDGKDAASSSTSAPPPLFFNVKTPLNNGHGAKLHEDTVWAGVECLAVFILDCGLFLPAAQVAEVERVVTEGVELLAHRPLEVSPFNDDEPQVLRHASTREAFVRLVHYYLLLAEEKKRNPGSTLYSEARLAFHCHLQDPDGAVARECRVALTALKTDTNSNRSHKVLDKELEEMEAEADNIMHHAGAGEAGYTLEELENGEYHVVRRVPKPKSPRKQ 397
            QAWA LE+ERA V+RDD SP+R+RA A  A+++     + TA   L+P+LAARVSGLLLPSAVTLLEALVASSRLEKAME +QG VCQCMGQAVAQ PVQGGVRFAAYR+MAVIIRYI+P+ AA  LGVPILPLLFNEALLALGNRV+LH LNT  ++  G +         +  P PL FNV+ PLNNGHGAKLHEDTVWAGVECLA FILDCGLFLPAAQVAEVE VVTEGVELLAHRPLEVSPFN+DEPQVLRHASTREAFVRLVHYYLLLAEEKKRNPGS LY+EA+LAFHCHLQDPDGAVARECRVALTALKTD   +R+ K  +K LE+MEAEAD  MH++G GE GYTLEELENGEYHVVRRV K  SPRK+
Sbjct:  319 QAWAKLEEERAGVKRDDPSPTRRRASATTAQESATSTNTSTADGTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQTPVQGGVRFAAYRAMAVIIRYIRPDTAAEGLGVPILPLLFNEALLALGNRVNLHALNTTTKTDVGPRSRNSEKGGGS--PKPLLFNVRNPLNNGHGAKLHEDTVWAGVECLATFILDCGLFLPAAQVAEVESVVTEGVELLAHRPLEVSPFNEDEPQVLRHASTREAFVRLVHYYLLLAEEKKRNPGSNLYTEAKLAFHCHLQDPDGAVARECRVALTALKTDRVDHRT-KENEKALEDMEAEADQNMHNSGTGEVGYTLEELENGEYHVVRRVSK--SPRKK 692
[Close]
BLAST of mRNA_L-elsbetiae_contig5819.14256.1 vs. uniprot
Match: A0A6H5JC72_9PHAE (GLOBIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC72_9PHAE)

HSP 1 Score: 530 bits (1364), Expect = 6.860e-172
Identity = 297/402 (73.88%), Postives = 328/402 (81.59%), Query Frame = 0 
Query:    1 PLSLSLSLSLSHRNLTETSRPLQAWAMLEDERADVRRDDQSPSRKRADA--ARKAQLEAESGTAILNPDLAARVSGLLLPSAVTLLEALVASSRLEKAMESQQGAVCQCMGQAVAQMPVQGGVRFAAYRSMAVIIRYIKPERAAASLGVPILPLLFNEALLALGNRVSLHPLNTRKESSKGNKDGKDAASSSTSAPPPLFFNVKTPLNNGHGAKLHEDTVWAGVECLAVFILDCGLFLPAAQ---VAEVERVVTEGVELLAHRPLEVSPFNDDEPQVLRHASTREAFVRLVHYYLLLAEEKKRNPGSTLYSEARLAFHCHLQDPDGAVARECRVALTALKTDTNSNRSHKVLDKELEEMEAEADNIMHHAGAGEAGYTLEELENGEYHVVRRVPKPKSPRKQ 397
            P  +SLS+SL  R L       QAWA LE+ERA V+RDD  P+R+RA A  A+++     +    L+P+LAARVSGLLLPSAVTLLEALVASSRLEKAME +QG VCQCMGQAVAQ PVQGGVRFAAYRSMAVI+RYIKPE AA  LGVPILPLLFNEALLALGNRV+LH LNT+   +  +++      S    P  L FNV+ PLNNGHGAKLHEDTVWAGVECLA FILDCGLFLPAAQ   VAEVE VVTEGVELLAHRPLEVSPFN+DEPQVLRHASTREAFVRLVHYYLLLAEEKKRNPGS LY+EA+LAFHCHLQDPDGAVARECRVALTALKTD   +R+ K  +K LE+MEAEAD  MH++G GE GYTLEELENGEYHVVRRV K  SPRK+
Sbjct: 1175 PFLVSLSISLVQRVLRMGE---QAWAKLEEERAGVKRDDPGPTRRRASAKTAQESTTHTNTAAGTLSPELAARVSGLLLPSAVTLLEALVASSRLEKAMEDRQGTVCQCMGQAVAQTPVQGGVRFAAYRSMAVIVRYIKPETAAEGLGVPILPLLFNEALLALGNRVNLHALNTKTVVAPRSRNSDKGGGS----PKTLLFNVRNPLNNGHGAKLHEDTVWAGVECLATFILDCGLFLPAAQAMPVAEVESVVTEGVELLAHRPLEVSPFNEDEPQVLRHASTREAFVRLVHYYLLLAEEKKRNPGSNLYTEAKLAFHCHLQDPDGAVARECRVALTALKTDRVDHRT-KENEKALEDMEAEADQNMHNSGTGEVGYTLEELENGEYHVVRRVSK--SPRKK 1566
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5819.14256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHK6_ECTSI2.460e-18276.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC72_9PHAE6.860e-17273.88GLOBIN domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 344..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5819contigL-elsbetiae_contig5819:430..11906 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5819.14256.1mRNA_L-elsbetiae_contig5819.14256.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5819 430..11906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5819.14256.1 ID=prot_L-elsbetiae_contig5819.14256.1|Name=mRNA_L-elsbetiae_contig5819.14256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=401bp
PLSLSLSLSLSHRNLTETSRPLQAWAMLEDERADVRRDDQSPSRKRADAA
RKAQLEAESGTAILNPDLAARVSGLLLPSAVTLLEALVASSRLEKAMESQ
QGAVCQCMGQAVAQMPVQGGVRFAAYRSMAVIIRYIKPERAAASLGVPIL
PLLFNEALLALGNRVSLHPLNTRKESSKGNKDGKDAASSSTSAPPPLFFN
VKTPLNNGHGAKLHEDTVWAGVECLAVFILDCGLFLPAAQVAEVERVVTE
GVELLAHRPLEVSPFNDDEPQVLRHASTREAFVRLVHYYLLLAEEKKRNP
GSTLYSEARLAFHCHLQDPDGAVARECRVALTALKTDTNSNRSHKVLDKE
LEEMEAEADNIMHHAGAGEAGYTLEELENGEYHVVRRVPKPKSPRKQAAN
*
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