prot_L-elsbetiae_contig581.14246.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig581.14246.1
Unique Nameprot_L-elsbetiae_contig581.14246.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length222
Homology
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A6H5L2U2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U2_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.070e-114
Identity = 172/208 (82.69%), Postives = 190/208 (91.35%), Query Frame = 0
Query:    9 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAEASAAP 216
            A T DALSY+DKDYDDP+MK++VHSLIEEEMAAF+PPDYLADKP PT RF+S +LK+EWARVRA+K ++ +DTSRYDLQPPQGAAAEDE +WKRA+DN RAQTEHQHNRLLNLELLQNYGA MWLGHNKAEEGTEAAVASQAKRAREEAE VN+KRKTSQE AE+TLWNLARKR EGFDKN+QIQ+ACEGLR EVKRLK L EA A P
Sbjct:   17 ASTPDALSYIDKDYDDPRMKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDVIDTSRYDLQPPQGAAAEDEAAWKRALDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAEKTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKAL-EAVAKP 223          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A835YMV2_9STRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 5.450e-50
Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = 0
Query:   10 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAP---TARFQSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 207
            V VDAL Y+DK+YDDP+ ++VVH LIEEEMA F P +YL D+       A  + SIL AE ARV     M  +D +RY+++ P GA AED G+W+ AV N +AQ  HQ+NR LNLELL NYGA  WL HNKA  G E+ + +  KR R+EA+ +N +R+ +Q    + LW+L R+R E  DKNLQI +A   L+ ++K+ K
Sbjct:    6 VFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYK 206          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: W7TEH7_9STRA (Breast carcinoma amplified sequence 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEH7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.840e-36
Identity = 87/202 (43.07%), Postives = 120/202 (59.41%), Query Frame = 0
Query:   10 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMA--AFDPPDYLADKPAPTARFQSSILKA-EWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKT 208
            + +DAL Y+D + D P ++  V  LI EEM    F   DYLAD+P P   F+ S   A E  RV A K M P+D SRY  + P      D  +W+ A++N+RAQ EH  NR++N+ELLQN+   +WL +N+  E  +  +  + +  R+EAE +N+ RKT QE     L NL RKR E    NL++Q AC  LRME+KRL+T
Sbjct:   24 LNLDALPYIDGEMD-PDIRARVDQLILEEMRNPRFPKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAELINLSRKTKQEEVAPRLSNLTRKRDETLYTNLELQKACAMLRMEIKRLRT 224          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A0M0JYG4_9EUKA (Pre-mRNA-splicing factor spf27-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYG4_9EUKA)

HSP 1 Score: 130 bits (326), Expect = 8.720e-34
Identity = 90/217 (41.47%), Postives = 118/217 (54.38%), Query Frame = 0
Query:    6 PGAAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARF-QSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEA----EGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE-ASAAP 216
            P   + +DAL Y+D  Y+DP+MK  V SL++ EM  F P +YLA  P     F + S+L+ EW RV  Q+ M  MDT RY L+PP      D  +W+RAV N  AQ EHQ  RL NLEL+Q +GA  W    +A+       ++Q KRA EE     E VN +RKT Q  A   L  L  +      KNL+I+ AC  L  E   L+   E A++AP
Sbjct:   18 PAPHIEIDALPYIDSQYNDPEMKARVDSLVQAEMRTFRPGNYLAHLPEHEVNFPEDSVLQYEWMRVCEQQPMSKMDTKRYQLEPPPPEQRNDPEAWQRAVRNAEAQLEHQSTRLGNLELMQQHGAHQW----RAQLNELDVASAQLKRAAEEVDERIELVNRRRKTEQLAAAPRLAALEAEWVSSVKKNLEIESACLQLEAECAGLRNAVEVATSAP 230          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.490e-33
Identity = 87/202 (43.07%), Postives = 120/202 (59.41%), Query Frame = 0
Query:   10 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMA--AFDPPDYLADKPAPTARFQSSILKA-EWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKT 208
            + +DAL Y+D + D P ++  V  LI EEM    F   DYLAD+P P   F+ S   A E  RV A K M P+D SRY  + P      D  +W+ A++N+RAQ EH  NR++N+ELLQN+   +WL +N+  E  +  +  + +  R+EAE +N+ RKT QE     L NL RKR E    NL++Q AC  LRME+KRL+T
Sbjct:    8 LNLDALPYIDGEMD-PDIRVRVDQLILEEMRNPRFSKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAECINLSRKTKQEEVAPRLSNLTRKRDEILYTNLELQKACAMLRMEIKRLRT 208          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A9SH09_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SH09_PHYPA)

HSP 1 Score: 126 bits (316), Expect = 3.940e-32
Identity = 87/205 (42.44%), Postives = 119/205 (58.05%), Query Frame = 0
Query:   11 TVDALSYVDKDYDDPQMKQVVHSLIEEEM--AAFDPPDYLAD-KPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE 211
            TVDAL Y+D DY DP++K  V  +I EEM  ++  P D+LA+  P P+   Q   +L  E+ RVRA KA   +D SRY L+PP      D G+WK AV N +AQ +HQ  RL NLEL+ NYG   W+ HN+  E  +A +   A   + E E +N +RK +Q+ A   L  L+ + +E   KNL I+ AC  L  EV +L+  AE
Sbjct:   31 TVDALPYIDHDYADPKVKAEVDKMIAEEMRLSSKKPSDFLAELPPVPSINAQDHPMLAKEFDRVRAGKAPVALDLSRYGLEPPPVNKRNDVGAWKSAVQNAKAQLQHQTLRLENLELMLNYGTTAWIVHNQHLEAFQARLRDTALEYQREIEILNRERKLNQQAAAVELNLLSSQWKEISQKNLDIEEACLKLEAEVLKLREEAE 235          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A5J4YGH3_9CHLO (Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGH3_9CHLO)

HSP 1 Score: 117 bits (294), Expect = 9.770e-29
Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = 0
Query:    9 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFD--PPDYLAD-KPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 207
            A  +DAL Y+D    D + +     LI+EE+   +  P DYLA   P P +RF+   IL+ E+ARV+A K ME MDTSR+ L PP  +   D  +W+ A DN  +Q EHQ+NRLLNLELL  +G      HNK+ EG    +  + ++ +++ + +N +RK SQE   R L  + ++      KN++I +AC+ L  EV  L+
Sbjct:   17 AGVIDALPYIDGMTSDDRHQ--AEELIKEELKKSNKKPSDYLASFPPLPASRFEGHPILQHEFARVKAGKQMEAMDTSRFHLTPPPASKQNDFSAWRAATDNAHSQLEHQYNRLLNLELLLRFGPNARRVHNKSLEGQVHRLEKEIEQLQQQKDSINRQRKLSQESDGRALQQMEQQYTALVAKNMEINMACQELESEVSELQ 217          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A1Y1W5F2_9FUNG (Breast carcinoma amplified sequence 2 n=2 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W5F2_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 2.090e-28
Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 0
Query:    9 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 207
            +  +D+L Y+DK+YDDP M+  V SLI++EM    PP      P  T  F+++ +L+ E+ RVRA K +   D  RY L+ P+ +  +  G W+ A +N  AQ EHQ+ RL+NLELLQ +GA  W   N  +EG    +     R R+E   VN  RK  Q  A   L ++  +  EG  K ++IQVA   L+ E+ +L+
Sbjct:    5 SAAIDSLPYIDKEYDDPSMRDQVSSLIQKEMGRMSPPLL----PKSTTLFKNNDLLRKEYERVRAGKPLPEFDIERYKLEAPEDS--DSVGIWRSAAENAAAQLEHQNIRLVNLELLQQFGANSWKLSNYQKEGLLRNIEKATDRHRDEGINVNKARKYEQTEAGIRLRDIEERWTEGVKKCIEIQVASSELKGEIAQLE 198          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A1X2G5Y0_9FUNG (Breast carcinoma amplified sequence 2 n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G5Y0_9FUNG)

HSP 1 Score: 115 bits (287), Expect = 3.700e-28
Identity = 75/201 (37.31%), Postives = 109/201 (54.23%), Query Frame = 0
Query:    8 AAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 207
            A + VDAL YVDK+ DDP+MK  V  LIE+EM      +  +D P     FQ   +L  EW RV  ++ ++ +D SRY+L+ P+     D  +WK +V N ++Q E Q   + NLELLQ YG   W  HN   E     +  + ++ R E   +N +RK  Q  A +TL  L  K  +   +NLQ+++AC  L  EV+ L+
Sbjct:   14 ADMEVDALPYVDKEIDDPEMKASVDRLIEQEMRRMRRKER-SDFPLKVDLFQQDDLLSQEWDRVGKKQTLDALDISRYELKGPEDD--NDVNAWKESVSNTKSQLESQAGSMFNLELLQKYGGNAWRVHNYQLETFLKQIQQETEQYRNEIRTINRERKDEQTQAAKTLQGLENKWSDLVSQNLQVEIACSALESEVEELR 211          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A068RTV0_9FUNG (Breast carcinoma amplified sequence 2 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RTV0_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 3.810e-28
Identity = 73/201 (36.32%), Postives = 111/201 (55.22%), Query Frame = 0
Query:   12 VDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQ-SSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE 211
            VDAL YVD++ DDP++K  V  L+++EM      D     P     FQ ++ LK EW RV+ ++ +  +DT RY+L+ P  A  +D   W++AVDN ++Q E Q   + NLELLQ YGA  W  HN   E     +  + +  RE+   ++ +RK  Q  A  +L +L  K  +   +NLQ+++AC  L  EV+ L+   E
Sbjct:   22 VDALPYVDREVDDPELKAAVDRLLDQEMRRMRRRDDRCPLPTQVELFQDNATLKEEWDRVKQKQPLNVLDTERYELKGP--ANDDDIEGWQKAVDNTKSQLESQAGSMFNLELLQKYGANAWRVHNYQLESQLKMLQKETEEYREKIREISRERKNEQTQAGGSLRSLENKWSDLITQNLQVEIACASLEQEVEELQRYKE 220          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2U2_9PHAE1.070e-11482.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMV2_9STRA5.450e-5049.25Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema m... [more]
W7TEH7_9STRA3.840e-3643.07Breast carcinoma amplified sequence 2 n=1 Tax=Nann... [more]
A0A0M0JYG4_9EUKA8.720e-3441.47Pre-mRNA-splicing factor spf27-like protein n=1 Ta... [more]
A0A4D9DBM6_9STRA3.490e-3343.07Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A9SH09_PHYPA3.940e-3242.44Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A5J4YGH3_9CHLO9.770e-2938.92Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Tre... [more]
A0A1Y1W5F2_9FUNG2.090e-2838.00Breast carcinoma amplified sequence 2 n=2 Tax=Lind... [more]
A0A1X2G5Y0_9FUNG3.700e-2837.31Breast carcinoma amplified sequence 2 n=1 Tax=Hess... [more]
A0A068RTV0_9FUNG3.810e-2836.32Breast carcinoma amplified sequence 2 n=2 Tax=Lich... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008409Pre-mRNA-splicing factor SPF27PFAMPF05700BCAS2coord: 11..209
e-value: 3.3E-55
score: 187.0
IPR008409Pre-mRNA-splicing factor SPF27PANTHERPTHR13296BCAS2 PROTEINcoord: 8..211
NoneNo IPR availablePANTHERPTHR13296:SF0PRE-MRNA-SPLICING FACTOR SPF27coord: 8..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig581contigL-elsbetiae_contig581:18394..21203 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig581.14246.1mRNA_L-elsbetiae_contig581.14246.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig581 17324..21209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig581.14246.1 ID=prot_L-elsbetiae_contig581.14246.1|Name=mRNA_L-elsbetiae_contig581.14246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp
MAAAPPGAAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLAD
KPAPTARFQSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSW
KRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQA
KRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLR
MEVKRLKTLAEASAAPAASSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008409SPF27