mRNA_L-elsbetiae_contig581.14246.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig581.14246.1
Unique NamemRNA_L-elsbetiae_contig581.14246.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A6H5L2U2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U2_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.800e-109
Identity = 170/210 (80.95%), Postives = 189/210 (90.00%), Query Frame = 1
Query:   31 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAEASAAPAA 660
            A T DALSY+DKDYDDP+MK++VHSLIEEEMAAF+PPDYLADKP PT RF+S +LK+EWARVRA+K ++ +DTSRYDLQPPQGAAAEDE +WKRA+DN RAQTEHQHNRLLNLELLQNYGA MWLGHNKAEEGTEAAVASQAKRAREEAE VN+KRKTSQE AE+TLWNLARKR EGFDKN+QIQ+ACEGLR EVKRLK L   +  P A
Sbjct:   17 ASTPDALSYIDKDYDDPRMKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDVIDTSRYDLQPPQGAAAEDEAAWKRALDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAEKTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKALEAVAKPPPA 226          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A835YMV2_9STRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.920e-46
Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = 1
Query:   34 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAP---TARFQSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 627
            V VDAL Y+DK+YDDP+ ++VVH LIEEEMA F P +YL D+       A  + SIL AE ARV     M  +D +RY+++ P GA AED G+W+ AV N +AQ  HQ+NR LNLELL NYGA  WL HNKA  G E+ + +  KR R+EA+ +N +R+ +Q    + LW+L R+R E  DKNLQI +A   L+ ++K+ K
Sbjct:    6 VFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYK 206          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: W7TEH7_9STRA (Breast carcinoma amplified sequence 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEH7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 5.150e-33
Identity = 87/202 (43.07%), Postives = 120/202 (59.41%), Query Frame = 1
Query:   34 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMA--AFDPPDYLADKPAPTARFQSSILKA-EWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKT 630
            + +DAL Y+D + D P ++  V  LI EEM    F   DYLAD+P P   F+ S   A E  RV A K M P+D SRY  + P      D  +W+ A++N+RAQ EH  NR++N+ELLQN+   +WL +N+  E  +  +  + +  R+EAE +N+ RKT QE     L NL RKR E    NL++Q AC  LRME+KRL+T
Sbjct:   24 LNLDALPYIDGEMD-PDIRARVDQLILEEMRNPRFPKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAELINLSRKTKQEEVAPRLSNLTRKRDETLYTNLELQKACAMLRMEIKRLRT 224          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A0M0JYG4_9EUKA (Pre-mRNA-splicing factor spf27-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYG4_9EUKA)

HSP 1 Score: 130 bits (326), Expect = 7.830e-31
Identity = 90/217 (41.47%), Postives = 118/217 (54.38%), Query Frame = 1
Query:   22 PGAAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARF-QSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEA----EGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE-ASAAP 654
            P   + +DAL Y+D  Y+DP+MK  V SL++ EM  F P +YLA  P     F + S+L+ EW RV  Q+ M  MDT RY L+PP      D  +W+RAV N  AQ EHQ  RL NLEL+Q +GA  W    +A+       ++Q KRA EE     E VN +RKT Q  A   L  L  +      KNL+I+ AC  L  E   L+   E A++AP
Sbjct:   18 PAPHIEIDALPYIDSQYNDPEMKARVDSLVQAEMRTFRPGNYLAHLPEHEVNFPEDSVLQYEWMRVCEQQPMSKMDTKRYQLEPPPPEQRNDPEAWQRAVRNAEAQLEHQSTRLGNLELMQQHGAHQW----RAQLNELDVASAQLKRAAEEVDERIELVNRRRKTEQLAAAPRLAALEAEWVSSVKKNLEIESACLQLEAECAGLRNAVEVATSAP 230          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.060e-30
Identity = 87/202 (43.07%), Postives = 120/202 (59.41%), Query Frame = 1
Query:   34 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMA--AFDPPDYLADKPAPTARFQSSILKA-EWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKT 630
            + +DAL Y+D + D P ++  V  LI EEM    F   DYLAD+P P   F+ S   A E  RV A K M P+D SRY  + P      D  +W+ A++N+RAQ EH  NR++N+ELLQN+   +WL +N+  E  +  +  + +  R+EAE +N+ RKT QE     L NL RKR E    NL++Q AC  LRME+KRL+T
Sbjct:    8 LNLDALPYIDGEMD-PDIRVRVDQLILEEMRNPRFSKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAECINLSRKTKQEEVAPRLSNLTRKRDEILYTNLELQKACAMLRMEIKRLRT 208          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A9SH09_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SH09_PHYPA)

HSP 1 Score: 126 bits (316), Expect = 2.770e-29
Identity = 87/205 (42.44%), Postives = 119/205 (58.05%), Query Frame = 1
Query:   37 TVDALSYVDKDYDDPQMKQVVHSLIEEEM--AAFDPPDYLAD-KPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE 639
            TVDAL Y+D DY DP++K  V  +I EEM  ++  P D+LA+  P P+   Q   +L  E+ RVRA KA   +D SRY L+PP      D G+WK AV N +AQ +HQ  RL NLEL+ NYG   W+ HN+  E  +A +   A   + E E +N +RK +Q+ A   L  L+ + +E   KNL I+ AC  L  EV +L+  AE
Sbjct:   31 TVDALPYIDHDYADPKVKAEVDKMIAEEMRLSSKKPSDFLAELPPVPSINAQDHPMLAKEFDRVRAGKAPVALDLSRYGLEPPPVNKRNDVGAWKSAVQNAKAQLQHQTLRLENLELMLNYGTTAWIVHNQHLEAFQARLRDTALEYQREIEILNRERKLNQQAAAVELNLLSSQWKEISQKNLDIEEACLKLEAEVLKLREEAE 235          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A5J4YGH3_9CHLO (Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGH3_9CHLO)

HSP 1 Score: 117 bits (294), Expect = 3.900e-26
Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = 1
Query:   31 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFD--PPDYLAD-KPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 627
            A  +DAL Y+D    D + +     LI+EE+   +  P DYLA   P P +RF+   IL+ E+ARV+A K ME MDTSR+ L PP  +   D  +W+ A DN  +Q EHQ+NRLLNLELL  +G      HNK+ EG    +  + ++ +++ + +N +RK SQE   R L  + ++      KN++I +AC+ L  EV  L+
Sbjct:   17 AGVIDALPYIDGMTSDDRHQ--AEELIKEELKKSNKKPSDYLASFPPLPASRFEGHPILQHEFARVKAGKQMEAMDTSRFHLTPPPASKQNDFSAWRAATDNAHSQLEHQYNRLLNLELLLRFGPNARRVHNKSLEGQVHRLEKEIEQLQQQKDSINRQRKLSQESDGRALQQMEQQYTALVAKNMEINMACQELESEVSELQ 217          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A1Y1W5F2_9FUNG (Breast carcinoma amplified sequence 2 n=2 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W5F2_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 6.950e-26
Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 1
Query:   31 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 627
            +  +D+L Y+DK+YDDP M+  V SLI++EM    PP      P  T  F+++ +L+ E+ RVRA K +   D  RY L+ P+ +  +  G W+ A +N  AQ EHQ+ RL+NLELLQ +GA  W   N  +EG    +     R R+E   VN  RK  Q  A   L ++  +  EG  K ++IQVA   L+ E+ +L+
Sbjct:    5 SAAIDSLPYIDKEYDDPSMRDQVSSLIQKEMGRMSPPLL----PKSTTLFKNNDLLRKEYERVRAGKPLPEFDIERYKLEAPEDS--DSVGIWRSAAENAAAQLEHQNIRLVNLELLQQFGANSWKLSNYQKEGLLRNIEKATDRHRDEGINVNKARKYEQTEAGIRLRDIEERWTEGVKKCIEIQVASSELKGEIAQLE 198          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A1X2G5Y0_9FUNG (Breast carcinoma amplified sequence 2 n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G5Y0_9FUNG)

HSP 1 Score: 115 bits (287), Expect = 1.200e-25
Identity = 75/201 (37.31%), Postives = 109/201 (54.23%), Query Frame = 1
Query:   28 AAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 627
            A + VDAL YVDK+ DDP+MK  V  LIE+EM      +  +D P     FQ   +L  EW RV  ++ ++ +D SRY+L+ P+     D  +WK +V N ++Q E Q   + NLELLQ YG   W  HN   E     +  + ++ R E   +N +RK  Q  A +TL  L  K  +   +NLQ+++AC  L  EV+ L+
Sbjct:   14 ADMEVDALPYVDKEIDDPEMKASVDRLIEQEMRRMRRKER-SDFPLKVDLFQQDDLLSQEWDRVGKKQTLDALDISRYELKGPEDD--NDVNAWKESVSNTKSQLESQAGSMFNLELLQKYGGNAWRVHNYQLETFLKQIQQETEQYRNEIRTINRERKDEQTQAAKTLQGLENKWSDLVSQNLQVEIACSALESEVEELR 211          
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A068RTV0_9FUNG (Breast carcinoma amplified sequence 2 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RTV0_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 1.280e-25
Identity = 73/201 (36.32%), Postives = 111/201 (55.22%), Query Frame = 1
Query:   40 VDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQ-SSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE 639
            VDAL YVD++ DDP++K  V  L+++EM      D     P     FQ ++ LK EW RV+ ++ +  +DT RY+L+ P  A  +D   W++AVDN ++Q E Q   + NLELLQ YGA  W  HN   E     +  + +  RE+   ++ +RK  Q  A  +L +L  K  +   +NLQ+++AC  L  EV+ L+   E
Sbjct:   22 VDALPYVDREVDDPELKAAVDRLLDQEMRRMRRRDDRCPLPTQVELFQDNATLKEEWDRVKQKQPLNVLDTERYELKGP--ANDDDIEGWQKAVDNTKSQLESQAGSMFNLELLQKYGANAWRVHNYQLESQLKMLQKETEEYREKIREISRERKNEQTQAGGSLRSLENKWSDLITQNLQVEIACASLEQEVEELQRYKE 220          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2U2_9PHAE1.800e-10980.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMV2_9STRA3.920e-4649.25Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema m... [more]
W7TEH7_9STRA5.150e-3343.07Breast carcinoma amplified sequence 2 n=1 Tax=Nann... [more]
A0A0M0JYG4_9EUKA7.830e-3141.47Pre-mRNA-splicing factor spf27-like protein n=1 Ta... [more]
A0A4D9DBM6_9STRA7.060e-3043.07Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A9SH09_PHYPA2.770e-2942.44Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A5J4YGH3_9CHLO3.900e-2638.92Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Tre... [more]
A0A1Y1W5F2_9FUNG6.950e-2638.00Breast carcinoma amplified sequence 2 n=2 Tax=Lind... [more]
A0A1X2G5Y0_9FUNG1.200e-2537.31Breast carcinoma amplified sequence 2 n=1 Tax=Hess... [more]
A0A068RTV0_9FUNG1.280e-2536.32Breast carcinoma amplified sequence 2 n=2 Tax=Lich... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig581contigL-elsbetiae_contig581:17324..21209 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.3
Seed ortholog evalue4.5e-83
Seed eggNOG ortholog2880.D8LQA4
Preferred nameBCAS2
KEGG koko:K12861,ko:K13336,ko:K20161
KEGG TC3.A.20.1,9.A.17.1
KEGG Pathwayko03040,ko04146,map03040,map04146
KEGG ModuleM00353,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000974,GO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005730,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008380,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009870,GO:0009987,GO:0010204,GO:0010467,GO:0015630,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0023052,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0045292,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070013,GO:0071007,GO:0071011,GO:0071013,GO:0071014,GO:0071704,GO:0080134,GO:0090304,GO:0098542,GO:1901360,GO:1902494,GO:1990904
EggNOG free text desc.mRNA processing
EggNOG OGsKOG3096@1,KOG3096@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041,ko03400,ko04131
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_005540.1
Exons3
Model size1742
Cds size666
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig581.14246.1prot_L-elsbetiae_contig581.14246.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig581 18394..21203 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816625.3636222-UTR-L-elsbetiae_contig581:17323..183931622816625.3636222-UTR-L-elsbetiae_contig581:17323..18393Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig581 17324..18393 -
1691683694.1972966-UTR-L-elsbetiae_contig581:17323..183931691683694.1972966-UTR-L-elsbetiae_contig581:17323..18393Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig581 17324..18393 -
1622816625.420606-UTR-L-elsbetiae_contig581:21203..212091622816625.420606-UTR-L-elsbetiae_contig581:21203..21209Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig581 21204..21209 -
1691683694.2462304-UTR-L-elsbetiae_contig581:21203..212091691683694.2462304-UTR-L-elsbetiae_contig581:21203..21209Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig581 21204..21209 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816625.3771753-CDS-L-elsbetiae_contig581:18393..186121622816625.3771753-CDS-L-elsbetiae_contig581:18393..18612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig581 18394..18612 -
1691683694.213079-CDS-L-elsbetiae_contig581:18393..186121691683694.213079-CDS-L-elsbetiae_contig581:18393..18612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig581 18394..18612 -
1622816625.390778-CDS-L-elsbetiae_contig581:20056..201531622816625.390778-CDS-L-elsbetiae_contig581:20056..20153Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig581 20057..20153 -
1691683694.225327-CDS-L-elsbetiae_contig581:20056..201531691683694.225327-CDS-L-elsbetiae_contig581:20056..20153Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig581 20057..20153 -
1622816625.405315-CDS-L-elsbetiae_contig581:20853..212031622816625.405315-CDS-L-elsbetiae_contig581:20853..21203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig581 20854..21203 -
1691683694.235852-CDS-L-elsbetiae_contig581:20853..212031691683694.235852-CDS-L-elsbetiae_contig581:20853..21203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig581 20854..21203 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig581.14246.1

>prot_L-elsbetiae_contig581.14246.1 ID=prot_L-elsbetiae_contig581.14246.1|Name=mRNA_L-elsbetiae_contig581.14246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp
MAAAPPGAAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLAD
KPAPTARFQSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSW
KRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQA
KRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLR
MEVKRLKTLAEASAAPAASSK*
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mRNA from alignment at L-elsbetiae_contig581:17324..21209-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig581.14246.1 ID=mRNA_L-elsbetiae_contig581.14246.1|Name=mRNA_L-elsbetiae_contig581.14246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3886bp|location=Sequence derived from alignment at L-elsbetiae_contig581:17324..21209- (Laminarionema elsbetiae ELsaHSoW15)
CTCGGGATGGCGGCGGCACCGCCCGGAGCGGCGGTGACCGTGGATGCCCT CTCCTACGTCGACAAGGACTACGACGACCCGCAGATGAAGCAGGTGGTGC ACTCCCTCATCGAGGAGGAGATGGCCGCCTTCGATCCACCGGACTACCTC GCTGACAAGCCCGCGCCCACGGCCCGGTTCCAGAGCTCGATTCTCAAGGC GGAGTGGGCGCGGGTCCGAGCCCAAAAGGCGATGGAACCCATGGACACCT CGCGGTACGACCTCCAGCCGCCGCAGGGCGCCGCGGCGGAGGACGAGGGG TCTTGGAAGCGGGCGGTGGACAACGTGCGGGCGCAGACGGAGCACCAGCA CAACCGGTGCGTTGTATGGACTCCGGTCTGTAGATGCTGCAATCCACCCC TCGCTCGGCCGGCGCCGAGCAACCGTAGTGGTGTGTGCGTATTGCTTCGC CGATGTTGTCGGTGGATGCTGCAACTCGCCTTCGACGCCGAGCAGCCGTT GTGGTGTGTATTGCTTCTCCAACATGGTTGCTACCTATCTGCGACAGGGA GGTTCGCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCTGCCCGGTAGTAGA TTTAGCTCGCCGCCGAGCACGCTCATGAGCAACGTATCCCTATTTTCACC CGAGCTTTACAGCAGTACTGGAATAAGTGCCCCCCGAGCCCAGCGTAGGT TACGGCGCCGTACTGTCGAGTTCGCGCTTCGTTTTGACCAGGCGATTTGG AGGATCTGCTGTCAGCGGTCGGCCGCCCACAGAATCGTCGGCAGAGCACT CACACGGAGCTGCTCATCTCAGCACGCTCCTGTGGACCCTACCGCCGAGT TTTGACGACCGTTGTGTCCAGCGCGAGGGTTAATAGCATGCTTTGTTGTT CCGCACTTGCTCGTGTGCTGCTTGCTGGTCTCGCTCGTACGATACACGGT GCCGCTTCGCTTCAGCGCCTCCCCCCCCCCCCCCCTCCCGGTCTTATCTT TTTGGGTCGCTCGTTTCCCTTTGATTCGGGTGCATCCGCGCCGCGAAAAC AATCAGGCTGCTCAACTTGGAGCTGCTTCAGAACTACGGAGCCCCTATGT GGTTAGGGCACAACAAGGCGGAAGAGGGGACTGAGGCAGCGGTAGCATCG CAGGTGCGTGTCTCGCGGAACAGGCAGAATGAAAAAAAAAAACGCATTGA AAGCAGTCGCATGTTTGTCGCCTTTGCCGTCGCGTTCCCCCCCCCGCGCA GCAGCGTGCGCGTTTCGGACGGGGGTTGGGTCGACATGTCCTTTTTCTAA CACCCCATGCTTTCAACACTGAAGGATCCGGTCGATGCAGGACACGATAG CCAGCTTGAAATATTTCCATTCATACAGCGGTACCGGCCCGGCCCGCCTA GAAAAAACGGAAAAAGTTCGGCTGAAGCCCGAGTTTCATATGCGAGGCTG AAGATTATCGCCGTCTTTTTATCTAGGATTTAGTGTGGTGATCGCCACGG ATCCCCTGCACACTCTCTTGTTTGTTTTGCTGGCCCCCTCTGAAAAACAC GCTCATGAGCGGGGGCGGTACTACTGTAAGTCAAGTCCCGACCACGCCGC CGCAAGCTCTCTTGGCCACACACAACACGCATGCTCCTTGCACACAGCCG AGCTGCGCGGCCAACGTCAGGACGATGGAACACACGGTCCAAAAGCATCC GATTATTTGTGACGATTTGGCACCCCAGTGGCTGCGAACGCCTACTAGTG TGCCGTCAAGTGTTGAGTCTTAAAATACACAAGTGTGGACCGGACTTCCA TGGCTTTACATCACCGTTTCGGTAACCTAGATGTGGTTGATCGTACTCGC GAGTATTTTTCACACAATTCAAGAGTATTTTTTTTTTCTTGACATTTATT TCCAGTGCTCGATGGGCTCCCTGTCACGAGGACACCTTGCCAGAGTGCTG AACAGTGGTCACACAGAAGGGTTCCTTTCCCCCGTCTGCGGTGCTTGCCT AAGATTTTTGTCGCGAGAAGGGTTCAGCCGTCCCTTTCCCTCGTCGACGG TGAGGTCGAAGTTCGATATATACCGTAAGTGACACAAGATACCACACCCC ATGGACCGACTTTTAGAGCTCCATTACTCCGTAACGAAGACGATGCCAGG CAAAACGACACATTTTCGGACAGCCCTTGACTAGATATTTCCAACGCCAC CCCTTCCGGCACAGGCACCCTCTTCGTTAAGGAGAAATGGAGCTCTAAAA GTCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTATATACTTCGA AGTATATACTAGTATATATATATGGGGGTTTTGTTTTATTTTTTATTTTT TGGTTTGGGGCAGGAATAATATAGTCGTCTTACTTTGATGGATTGCCGGC AGCAAGCTGGAAATTCACTCTTTTCCCCCGTCGCCTAAATATATTTTCTT ACGCGAGCTCTGAAACTGCTACAACATGTAGTCCGGATACGCAAAATCGA CACCCCCCCCCCCCCCCCCCCCCCCGCACCCCGCGCCCCGCCCCGCCCCG TCTTGAACATCTACCCAAACATACATGTATGCATGTAAACTGCACAGGCG AAACGAGCTCGCGAAGAGGCGGAGGGTGTGAACATCAAGCGCAAAACTTC GCAGGAGGTGGCCGAGAGGACGCTGTGGAACCTGGCGCGGAAGCGAAGAG AGGGGTTCGACAAAAACCTGCAGATACAGGTGGCGTGCGAGGGGCTGAGG ATGGAGGTTAAGCGGCTCAAGACTCTGGCGGAAGCCTCGGCCGCCCCGGC TGCCTCGTCGAAGTGAGTCGCCGCTGCCGGTGGCGGCGGGAGTAGCAGAG AGAGAAACAATTGGCATGCGGAGATCGGTGTGGTGCACGCGCGCTAGCTA CCACGGCGACGGCAGGGGGAGGCAGCGACCCACGGAAGCGAGCGGCAGAG GAACGGGGGACTCGGCGGGTGTTTCTCTTGGGGTCATTGCATGGACCATC CTATCAACTACGGTTTCATCCACGGGGCCTCTGGAGACGGAGAGGCGGCC CAAGCGACTTCGGGCGTGTTCTTTCGCAACGGGGGAGGGGGTAGTGGTCG GCCTGCTAGGGGGGACAATCACATCGCGGCAAGCACACAGCAGGAGAGGA AAAAAGGAGCGCAGGGCGGACCCAGAAAACGTCGGCGGTACAATATTCAA ACGTGGATCCTCTGTGCCCATGCAGTACGGTGGTTCTCACGGAGAACCAA CACCTCGCTTGTCTGTGGGTGCAGGGAAGAAAATAAAATAAAATAAAAAG TGGCTTTTGATTGGTGTGTCTGCCGTAGCCGTCATGACGATAGTATCTTG ATCGTGGGTCATGCGGCGCACTGCTCACGTAAAACTACATAGTTTGAGTA CAAAATAGCGGCGATACCGCGAGAAGGGGGGTCGTAGCGTGTGAGGTATG TTTTTGTGTGTGTGTTTCGTGTTGAAGTAGGAAAGGCCGCGTGCTGCAAA ATAACTATGGTACTATTCTGCCGCGTGGGTGGGCGATGAAACGTTGTGTG ATGACCGCAAAATAATTTCTTGAACTTGTCAGAGATTCCCGTCGCTGCTG TGAGCGACCCTAAAACAACCGATCGAGGCAAGAATTTCCCGACCCTCGGT CTTTTGCCTTTTGGCCAGATTAGAGGTTAACGATCTAAGGCATTATATTG ATGTTTTTTTTAGTGTGGACAAAATATAAGAAAATCGACGTTGTACCAGT TTGTTCCGTCGTATCCTTGGCACCAACATGTATAGTTGATCCTCAGGAGG GCGGTACTCGAGCTACAGCTCTAGCTGCTCCCACTTGCTGGCACCGAACG CTCCGTCGTCGCGGACCTCGCGGACCGCTGTGCTGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig581:17324..21209-

>mRNA_L-elsbetiae_contig581.14246.1 ID=mRNA_L-elsbetiae_contig581.14246.1|Name=mRNA_L-elsbetiae_contig581.14246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1332bp|location=Sequence derived from alignment at L-elsbetiae_contig581:17324..21209- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGCGGCACCGCCCGGAGCGGCGGTGACCGTGGATGCCCTCTCCTA
CGTCGACAAGGACTACGACGACCCGCAGATGAAGCAGGTGGTGCACTCCC
TCATCGAGGAGGAGATGGCCGCCTTCGATCCACCGGACTACCTCGCTGAC
AAGCCCGCGCCCACGGCCCGGTTCCAGAGCTCGATTCTCAAGGCGGAGTG
GGCGCGGGTCCGAGCCCAAAAGGCGATGGAACCCATGGACACCTCGCGGT
ACGACCTCCAGCCGCCGCAGGGCGCCGCGGCGGAGGACGAGGGGTCTTGG
AAGCGGGCGGTGGACAACGTGCGGGCGCAGACGGAGCACCAGCACAACCG
ATGGCGGCGGCACCGCCCGGAGCGGCGGTGACCGTGGATGCCCTCTCCTA
CGTCGACAAGGACTACGACGACCCGCAGATGAAGCAGGTGGTGCACTCCC
TCATCGAGGAGGAGATGGCCGCCTTCGATCCACCGGACTACCTCGCTGAC
AAGCCCGCGCCCACGGCCCGGTTCCAGAGCTCGATTCTCAAGGCGGAGTG
GGCGCGGGTCCGAGCCCAAAAGGCGATGGAACCCATGGACACCTCGCGGT
ACGACCTCCAGCCGCCGCAGGGCGCCGCGGCGGAGGACGAGGGGTCTTGG
AAGCGGGCGGTGGACAACGTGCGGGCGCAGACGGAGCACCAGCACAACCG
GCTGCTCAACTTGGAGCTGCTTCAGAACTACGGAGCCCCTATGTGGTTAG
GGCACAACAAGGCGGAAGAGGGGACTGAGGCAGCGGTAGCATCGCAGGCT
GCTCAACTTGGAGCTGCTTCAGAACTACGGAGCCCCTATGTGGTTAGGGC
ACAACAAGGCGGAAGAGGGGACTGAGGCAGCGGTAGCATCGCAGGCGAAA
CGAGCTCGCGAAGAGGCGGAGGGTGTGAACATCAAGCGCAAAACTTCGCA
GGAGGTGGCCGAGAGGACGCTGTGGAACCTGGCGCGGAAGCGAAGAGAGG
GGTTCGACAAAAACCTGCAGATACAGGTGGCGTGCGAGGGGCTGAGGATG
GAGGTTAAGCGGCTCAAGACTCTGGCGGAAGCCTCGGCCGCCCCGGCTGC
CTCGTCGAAGTGAGCGAAACGAGCTCGCGAAGAGGCGGAGGGTGTGAACA
TCAAGCGCAAAACTTCGCAGGAGGTGGCCGAGAGGACGCTGTGGAACCTG
GCGCGGAAGCGAAGAGAGGGGTTCGACAAAAACCTGCAGATACAGGTGGC
GTGCGAGGGGCTGAGGATGGAGGTTAAGCGGCTCAAGACTCTGGCGGAAG
CCTCGGCCGCCCCGGCTGCCTCGTCGAAGTGA
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