mRNA_L-elsbetiae_contig581.14246.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A6H5L2U2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U2_9PHAE) HSP 1 Score: 336 bits (861), Expect = 1.800e-109 Identity = 170/210 (80.95%), Postives = 189/210 (90.00%), Query Frame = 1 Query: 31 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAEASAAPAA 660 A T DALSY+DKDYDDP+MK++VHSLIEEEMAAF+PPDYLADKP PT RF+S +LK+EWARVRA+K ++ +DTSRYDLQPPQGAAAEDE +WKRA+DN RAQTEHQHNRLLNLELLQNYGA MWLGHNKAEEGTEAAVASQAKRAREEAE VN+KRKTSQE AE+TLWNLARKR EGFDKN+QIQ+ACEGLR EVKRLK L + P A Sbjct: 17 ASTPDALSYIDKDYDDPRMKEIVHSLIEEEMAAFEPPDYLADKPLPTTRFKSPLLKSEWARVRAEKPLDVIDTSRYDLQPPQGAAAEDEAAWKRALDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAEKTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLKALEAVAKPPPA 226
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A835YMV2_9STRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV2_9STRA) HSP 1 Score: 171 bits (432), Expect = 3.920e-46 Identity = 99/201 (49.25%), Postives = 133/201 (66.17%), Query Frame = 1 Query: 34 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAP---TARFQSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 627 V VDAL Y+DK+YDDP+ ++VVH LIEEEMA F P +YL D+ A + SIL AE ARV M +D +RY+++ P GA AED G+W+ AV N +AQ HQ+NR LNLELL NYGA WL HNKA G E+ + + KR R+EA+ +N +R+ +Q + LW+L R+R E DKNLQI +A L+ ++K+ K Sbjct: 6 VFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYK 206
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: W7TEH7_9STRA (Breast carcinoma amplified sequence 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEH7_9STRA) HSP 1 Score: 136 bits (343), Expect = 5.150e-33 Identity = 87/202 (43.07%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 34 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMA--AFDPPDYLADKPAPTARFQSSILKA-EWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKT 630 + +DAL Y+D + D P ++ V LI EEM F DYLAD+P P F+ S A E RV A K M P+D SRY + P D +W+ A++N+RAQ EH NR++N+ELLQN+ +WL +N+ E + + + + R+EAE +N+ RKT QE L NL RKR E NL++Q AC LRME+KRL+T Sbjct: 24 LNLDALPYIDGEMD-PDIRARVDQLILEEMRNPRFPKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAELINLSRKTKQEEVAPRLSNLTRKRDETLYTNLELQKACAMLRMEIKRLRT 224
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A0M0JYG4_9EUKA (Pre-mRNA-splicing factor spf27-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYG4_9EUKA) HSP 1 Score: 130 bits (326), Expect = 7.830e-31 Identity = 90/217 (41.47%), Postives = 118/217 (54.38%), Query Frame = 1 Query: 22 PGAAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARF-QSSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEA----EGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE-ASAAP 654 P + +DAL Y+D Y+DP+MK V SL++ EM F P +YLA P F + S+L+ EW RV Q+ M MDT RY L+PP D +W+RAV N AQ EHQ RL NLEL+Q +GA W +A+ ++Q KRA EE E VN +RKT Q A L L + KNL+I+ AC L E L+ E A++AP Sbjct: 18 PAPHIEIDALPYIDSQYNDPEMKARVDSLVQAEMRTFRPGNYLAHLPEHEVNFPEDSVLQYEWMRVCEQQPMSKMDTKRYQLEPPPPEQRNDPEAWQRAVRNAEAQLEHQSTRLGNLELMQQHGAHQW----RAQLNELDVASAQLKRAAEEVDERIELVNRRRKTEQLAAAPRLAALEAEWVSSVKKNLEIESACLQLEAECAGLRNAVEVATSAP 230
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A4D9DBM6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBM6_9STRA) HSP 1 Score: 136 bits (342), Expect = 7.060e-30 Identity = 87/202 (43.07%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 34 VTVDALSYVDKDYDDPQMKQVVHSLIEEEMA--AFDPPDYLADKPAPTARFQSSILKA-EWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKT 630 + +DAL Y+D + D P ++ V LI EEM F DYLAD+P P F+ S A E RV A K M P+D SRY + P D +W+ A++N+RAQ EH NR++N+ELLQN+ +WL +N+ E + + + + R+EAE +N+ RKT QE L NL RKR E NL++Q AC LRME+KRL+T Sbjct: 8 LNLDALPYIDGEMD-PDIRVRVDQLILEEMRNPRFSKRDYLADRPMPELNFEKSFFIATELERVAAGKPMAPLDESRYAGKKPDPGLQGDLQAWRTALNNLRAQEEHLGNRIVNMELLQNFAPDVWLAYNRELETFKGNLDKELESLRKEAECINLSRKTKQEEVAPRLSNLTRKRDEILYTNLELQKACAMLRMEIKRLRT 208
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A9SH09_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SH09_PHYPA) HSP 1 Score: 126 bits (316), Expect = 2.770e-29 Identity = 87/205 (42.44%), Postives = 119/205 (58.05%), Query Frame = 1 Query: 37 TVDALSYVDKDYDDPQMKQVVHSLIEEEM--AAFDPPDYLAD-KPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE 639 TVDAL Y+D DY DP++K V +I EEM ++ P D+LA+ P P+ Q +L E+ RVRA KA +D SRY L+PP D G+WK AV N +AQ +HQ RL NLEL+ NYG W+ HN+ E +A + A + E E +N +RK +Q+ A L L+ + +E KNL I+ AC L EV +L+ AE Sbjct: 31 TVDALPYIDHDYADPKVKAEVDKMIAEEMRLSSKKPSDFLAELPPVPSINAQDHPMLAKEFDRVRAGKAPVALDLSRYGLEPPPVNKRNDVGAWKSAVQNAKAQLQHQTLRLENLELMLNYGTTAWIVHNQHLEAFQARLRDTALEYQREIEILNRERKLNQQAAAVELNLLSSQWKEISQKNLDIEEACLKLEAEVLKLREEAE 235
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A5J4YGH3_9CHLO (Pre-mRNA-splicing factor SPF27 protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YGH3_9CHLO) HSP 1 Score: 117 bits (294), Expect = 3.900e-26 Identity = 79/203 (38.92%), Postives = 117/203 (57.64%), Query Frame = 1 Query: 31 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFD--PPDYLAD-KPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 627 A +DAL Y+D D + + LI+EE+ + P DYLA P P +RF+ IL+ E+ARV+A K ME MDTSR+ L PP + D +W+ A DN +Q EHQ+NRLLNLELL +G HNK+ EG + + ++ +++ + +N +RK SQE R L + ++ KN++I +AC+ L EV L+ Sbjct: 17 AGVIDALPYIDGMTSDDRHQ--AEELIKEELKKSNKKPSDYLASFPPLPASRFEGHPILQHEFARVKAGKQMEAMDTSRFHLTPPPASKQNDFSAWRAATDNAHSQLEHQYNRLLNLELLLRFGPNARRVHNKSLEGQVHRLEKEIEQLQQQKDSINRQRKLSQESDGRALQQMEQQYTALVAKNMEINMACQELESEVSELQ 217
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A1Y1W5F2_9FUNG (Breast carcinoma amplified sequence 2 n=2 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W5F2_9FUNG) HSP 1 Score: 115 bits (288), Expect = 6.950e-26 Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 31 AVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 627 + +D+L Y+DK+YDDP M+ V SLI++EM PP P T F+++ +L+ E+ RVRA K + D RY L+ P+ + + G W+ A +N AQ EHQ+ RL+NLELLQ +GA W N +EG + R R+E VN RK Q A L ++ + EG K ++IQVA L+ E+ +L+ Sbjct: 5 SAAIDSLPYIDKEYDDPSMRDQVSSLIQKEMGRMSPPLL----PKSTTLFKNNDLLRKEYERVRAGKPLPEFDIERYKLEAPEDS--DSVGIWRSAAENAAAQLEHQNIRLVNLELLQQFGANSWKLSNYQKEGLLRNIEKATDRHRDEGINVNKARKYEQTEAGIRLRDIEERWTEGVKKCIEIQVASSELKGEIAQLE 198
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A1X2G5Y0_9FUNG (Breast carcinoma amplified sequence 2 n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G5Y0_9FUNG) HSP 1 Score: 115 bits (287), Expect = 1.200e-25 Identity = 75/201 (37.31%), Postives = 109/201 (54.23%), Query Frame = 1 Query: 28 AAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQSS-ILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLK 627 A + VDAL YVDK+ DDP+MK V LIE+EM + +D P FQ +L EW RV ++ ++ +D SRY+L+ P+ D +WK +V N ++Q E Q + NLELLQ YG W HN E + + ++ R E +N +RK Q A +TL L K + +NLQ+++AC L EV+ L+ Sbjct: 14 ADMEVDALPYVDKEIDDPEMKASVDRLIEQEMRRMRRKER-SDFPLKVDLFQQDDLLSQEWDRVGKKQTLDALDISRYELKGPEDD--NDVNAWKESVSNTKSQLESQAGSMFNLELLQKYGGNAWRVHNYQLETFLKQIQQETEQYRNEIRTINRERKDEQTQAAKTLQGLENKWSDLVSQNLQVEIACSALESEVEELR 211
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Match: A0A068RTV0_9FUNG (Breast carcinoma amplified sequence 2 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RTV0_9FUNG) HSP 1 Score: 115 bits (288), Expect = 1.280e-25 Identity = 73/201 (36.32%), Postives = 111/201 (55.22%), Query Frame = 1 Query: 40 VDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADKPAPTARFQ-SSILKAEWARVRAQKAMEPMDTSRYDLQPPQGAAAEDEGSWKRAVDNVRAQTEHQHNRLLNLELLQNYGAPMWLGHNKAEEGTEAAVASQAKRAREEAEGVNIKRKTSQEVAERTLWNLARKRREGFDKNLQIQVACEGLRMEVKRLKTLAE 639 VDAL YVD++ DDP++K V L+++EM D P FQ ++ LK EW RV+ ++ + +DT RY+L+ P A +D W++AVDN ++Q E Q + NLELLQ YGA W HN E + + + RE+ ++ +RK Q A +L +L K + +NLQ+++AC L EV+ L+ E Sbjct: 22 VDALPYVDREVDDPELKAAVDRLLDQEMRRMRRRDDRCPLPTQVELFQDNATLKEEWDRVKQKQPLNVLDTERYELKGP--ANDDDIEGWQKAVDNTKSQLESQAGSMFNLELLQKYGANAWRVHNYQLESQLKMLQKETEEYREKIREISRERKNEQTQAGGSLRSLENKWSDLITQNLQVEIACASLEQEVEELQRYKE 220 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig581.14246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig581.14246.1 >prot_L-elsbetiae_contig581.14246.1 ID=prot_L-elsbetiae_contig581.14246.1|Name=mRNA_L-elsbetiae_contig581.14246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp MAAAPPGAAVTVDALSYVDKDYDDPQMKQVVHSLIEEEMAAFDPPDYLADback to top mRNA from alignment at L-elsbetiae_contig581:17324..21209- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig581.14246.1 ID=mRNA_L-elsbetiae_contig581.14246.1|Name=mRNA_L-elsbetiae_contig581.14246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3886bp|location=Sequence derived from alignment at L-elsbetiae_contig581:17324..21209- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig581:17324..21209- >mRNA_L-elsbetiae_contig581.14246.1 ID=mRNA_L-elsbetiae_contig581.14246.1|Name=mRNA_L-elsbetiae_contig581.14246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1332bp|location=Sequence derived from alignment at L-elsbetiae_contig581:17324..21209- (Laminarionema elsbetiae ELsaHSoW15)back to top |