prot_L-elsbetiae_contig58.14226.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig58.14226.1
Unique Nameprot_L-elsbetiae_contig58.14226.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length155
Homology
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BLAST of mRNA_L-elsbetiae_contig58.14226.1 vs. uniprot
Match: D7FLT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT0_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 9.980e-43
Identity = 90/163 (55.21%), Postives = 111/163 (68.10%), Query Frame = 0 
Query:    1 MALAFVCPCFGRFVPEKLKSA-----PVMKATVSNHDKDIMKMRAFKAASEEMGENAGEIEMLKRVDEITDKLLREAFPDAYTLAPKKK-RAVDSPDIWENGTIVRYMAGAMILLLAAGGLYAWWDPREVAAPDRTKFIRATP---AVPSAAAKATSNSRKTR 154
            +A+A VCP   +    K   A       M ATVS  DK++ KMRA+KAA +EMGE+A E+ MLKRV+EITDKLLRE+FPDAY  AP K+ +AVDS D+WENGT+VRY+A  M LLLAA GLYAW D      PDRT  I+ TP   + PSA + + S+SRK R
Sbjct:   12 IAIALVCPSCAKGFGRKRTMARQGDQEPMAATVSTRDKELAKMRAYKAAVQEMGEDADELAMLKRVEEITDKLLRESFPDAYKPAPAKRPKAVDSDDVWENGTVVRYLARVMALLLAAAGLYAWNDKDVREKPDRT--IKDTPPRSSRPSARSSSASDSRKMR 172
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig58.14226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLT0_ECTSI9.980e-4355.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..97
NoneNo IPR availableTMHMMTMhelixcoord: 97..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig58contigL-elsbetiae_contig58:55461..58964 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig58.14226.1mRNA_L-elsbetiae_contig58.14226.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig58 54822..58970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig58.14226.1 ID=prot_L-elsbetiae_contig58.14226.1|Name=mRNA_L-elsbetiae_contig58.14226.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
MALAFVCPCFGRFVPEKLKSAPVMKATVSNHDKDIMKMRAFKAASEEMGE
NAGEIEMLKRVDEITDKLLREAFPDAYTLAPKKKRAVDSPDIWENGTIVR
YMAGAMILLLAAGGLYAWWDPREVAAPDRTKFIRATPAVPSAAAKATSNS
RKTR*
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