prot_L-elsbetiae_contig5779.14190.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5779.14190.1
Unique Nameprot_L-elsbetiae_contig5779.14190.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length172
Homology
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BLAST of mRNA_L-elsbetiae_contig5779.14190.1 vs. uniprot
Match: D7FXG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG3_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.320e-24
Identity = 69/114 (60.53%), Postives = 78/114 (68.42%), Query Frame = 0 
Query:   62 ASSIFNSNVSGHSSYSGFSAMSSIHAGFGGSELGSVGEGNSAXXXXXXGTGPAS-----AAWRTPPLGAQKGDPMGGGEDGATPPAHGSTGGALGWGSIMGSGATSGAGVGDGP 170
            +S+IF SNVSGHSSYSGFSAMSS+HA FGGSELG+   G           G        A WRTPPLG+QKGDP   G++   PPAHGSTGGALGWGSIMGSG  +  G G+GP
Sbjct:   56 SSTIFGSNVSGHSSYSGFSAMSSMHA-FGGSELGNSSGGGGMAGVNAAADGXXXXNNNPATWRTPPLGSQKGDP---GDESGNPPAHGSTGGALGWGSIMGSGGAT-RGTGEGP 164
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BLAST of mRNA_L-elsbetiae_contig5779.14190.1 vs. uniprot
Match: A0A6H5L3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L2_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 3.150e-24
Identity = 73/118 (61.86%), Postives = 82/118 (69.49%), Query Frame = 0 
Query:   61 DASSIFNSNVSGHSSYSGFSAMSSIHAGFGGSELGSVGEGNSAXXXXXXGTGPAS--------AAWRTPPLGAQKGDPMGGGEDGATPPAHGSTGGALGWGSIMGSGATSGAGVGDGP 170
            D+S+IF SNVSGHSSYSGFSAMSS+HA FGGSELG     NS+      G  PA         A WRTPPLG+QKGDP   G++   PPAHGSTGGALGWGSIMGSG  +  G G+GP
Sbjct: 1615 DSSTIFGSNVSGHSSYSGFSAMSSMHA-FGGSELG-----NSSSGGMAGGNAPADGSSSGNNLATWRTPPLGSQKGDP---GDESGNPPAHGSTGGALGWGSIMGSGGAT-RGTGEGP 1722
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5779.14190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXG3_ECTSI1.320e-2460.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3L2_9PHAE3.150e-2461.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5779contigL-elsbetiae_contig5779:1818..2429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5779.14190.1mRNA_L-elsbetiae_contig5779.14190.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5779 1818..2429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5779.14190.1 ID=prot_L-elsbetiae_contig5779.14190.1|Name=mRNA_L-elsbetiae_contig5779.14190.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MRQRHEQQVYGSRRSSSPGGASSRSRGGGAADGGAGGGGGGGGGGGGGGG
GVSSLGNNHGDASSIFNSNVSGHSSYSGFSAMSSIHAGFGGSELGSVGEG
NSAAAAAAAGTGPASAAWRTPPLGAQKGDPMGGGEDGATPPAHGSTGGAL
GWGSIMGSGATSGAGVGDGPG*
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