prot_L-elsbetiae_contig5665.14018.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5665.14018.1
Unique Nameprot_L-elsbetiae_contig5665.14018.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length110
Homology
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BLAST of mRNA_L-elsbetiae_contig5665.14018.1 vs. uniprot
Match: D8LGE1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGE1_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.100e-12
Identity = 30/32 (93.75%), Postives = 32/32 (100.00%), Query Frame = 0 
Query:   79 RLLKEGGVWINFGPLLFHWSDSSLRETDERFQ 110
            RLLKEGGVWINFGPLL+HWSDSSLR+TDERFQ
Sbjct:  260 RLLKEGGVWINFGPLLYHWSDSSLRKTDERFQ 291
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5665.14018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGE1_ECTSI2.100e-1293.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012901N2227-likePFAMPF07942N2227coord: 79..103
e-value: 6.9E-6
score: 25.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5665contigL-elsbetiae_contig5665:10392..10721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5665.14018.1mRNA_L-elsbetiae_contig5665.14018.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5665 10392..10723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5665.14018.1 ID=prot_L-elsbetiae_contig5665.14018.1|Name=mRNA_L-elsbetiae_contig5665.14018.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp
QERSETKRFLRSCVERSMPFDTYTYAKTKKNIGIFYLSCTCGENRVLTAS
VRCLLQRANSCTQENLVPPAIAPAFYCLRLLKEGGVWINFGPLLFHWSDS
SLRETDERFQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012901N2227