prot_L-elsbetiae_contig5660.14014.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5660.14014.1
Unique Nameprot_L-elsbetiae_contig5660.14014.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length175
Homology
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BLAST of mRNA_L-elsbetiae_contig5660.14014.1 vs. uniprot
Match: A0A6H5KSQ1_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSQ1_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 2.260e-5
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:   86 RPDGYEGPLCPSGGFFSKPQTPPTTPTPSRSNG 118
            RPDG+EGPLCPSG FFSKPQTPP +PT   SNG
Sbjct:  428 RPDGHEGPLCPSGSFFSKPQTPPGSPTGGVSNG 460
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5660.14014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KSQ1_9PHAE2.260e-578.79B box-type domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5660contigL-elsbetiae_contig5660:7129..7653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5660.14014.1mRNA_L-elsbetiae_contig5660.14014.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5660 7129..7653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5660.14014.1 ID=prot_L-elsbetiae_contig5660.14014.1|Name=mRNA_L-elsbetiae_contig5660.14014.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
KPAARAACSGAAGAGTPAENGKQAAAGVGGSSSAVGIPPKKFKLNGSAAA
AATPPPPRPATAAAAGASAAAGSTPTPQSARRGGSRPDGYEGPLCPSGGF
FSKPQTPPTTPTPSRSNGAKRPRSTSLPRVTSAGEPSGDDKPTGPAAAAA
TAATAEDPRNSSSNGGRPGLHENGE
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