prot_L-elsbetiae_contig5609.13943.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5609.13943.1
Unique Name	prot_L-elsbetiae_contig5609.13943.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	542

Homology

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BLAST of mRNA_L-elsbetiae_contig5609.13943.1 vs. uniprot
Match: D8LME4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME4_ECTSI)

HSP 1 Score: 515 bits (1326), Expect = 1.410e-164
Identity = 362/554 (65.34%), Postives = 386/554 (69.68%), Query Frame = 0

Query:    1 MPVKVIYRRPSKVRRLLLRVRVASLTLRLADAARLRKVGTGPEVLGGTMPWGLGPPRGHPILSLRLDGAMLAMVVREASGRRGGGGSGLGGHGVMTEGAITLTVASVRAEGSDAGVDKSRGVMLPILAVSP-KPPLRRRRDGSG----------NGDANVTTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGSGLEIAAKWTLEPLHGGXXXXXXXXXXXXDTGFPTKSGPRRRRSGNAGSSAAARGQGR-GXAXRGGEVGVGLVKRSMDIRVGRLELWPDPPVLGRISHLIRATVGAKDLSRGLSRRERARKLRRERGLSERPPGGEGALWPPVGDPLEELTELVWPSSELPALVVQLSVEEAACLLSFHGRALSELQLKRGLTIGVETYRPGLARRAMECRGLLRGLLLWDRTGSASGELACIISGLEGPHPSALKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDEAETGGVELQWLFTGRV 542
            MPVKVIYRRPSKVRRLLLRVRV+SLTLRLADAARL+KVGTG EVLG TMPWGL PPRGHPIL+LRLDGAMLAMVVRE               G MTEGAITLTVAS+RAEGSDAGVDK+RGVMLPILAVSP +PP RR                 G+A   T +           XXXXXXXXXXXXXXXXXXXXXXXXXXX                                    S   GLEI+AKWTLEPLHGGXXXXXXXXXXXX             R G+ G++A + G GR G    GGEVGVGLVKRSMDIRVGRLELWPDPPVLGRISHLIRATVGAKDLSRGLSRRER R+ RRERGL+ERPPGGEGA+WPPV DP+EELTELVWPSSELPAL V +SV+EAACLLSFHGR LSELQL+RGLTIGVET+R GL RRAMECRGLLRGLLLWDRTGSASGELACIIS L+GPHPSALKPA     XXXXXX                                   + EA   GVELQWLFTGR+
Sbjct:    1 MPVKVIYRRPSKVRRLLLRVRVSSLTLRLADAARLKKVGTGAEVLGSTMPWGLDPPRGHPILALRLDGAMLAMVVRE---------------GRMTEGAITLTVASIRAEGSDAGVDKARGVMLPILAVSPGRPPARRGSKSXXXXXXXXXXXXEGEARANTADDSFAADIGEASXXXXXXXXXXXXXXXXXXXXXXXXXXXPSA---------------------------------SPARGLEISAKWTLEPLHGGXXXXXXXXXXXXXXXX---------RRGSIGATANSGGGGRVGVREAGGEVGVGLVKRSMDIRVGRLELWPDPPVLGRISHLIRATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEELTELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFRQGLGRRAMECRGLLRGLLLWDRTGSASGELACIISSLDGPHPSALKPATAAAAXXXXXXASAPVEGSAADAEFLEGGDRAAFLLPR-------GSAEAGNRGVELQWLFTGRI 490

[Close]

BLAST of mRNA_L-elsbetiae_contig5609.13943.1 vs. uniprot
Match: A0A6H5K463_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K463_9PHAE)

HSP 1 Score: 432 bits (1111), Expect = 3.140e-131
Identity = 345/629 (54.85%), Postives = 376/629 (59.78%), Query Frame = 0

Query:    1 MPVKVIYRRPSKVRRLLLRVRVASLTLRLADAARLRKVGTGPEVLGGTMPWGLGPPRGHPILSLRLDGAMLAMVVREASGRRGGGGS------------------------------------------------------------------------GLGG----HGVMTEGAITLTVASVRAEGSDAGVDKSRGVMLPILAVSP-KPPLRRRRDGS----------GNGDANVTTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGSGLEIAAKWTLEPLHGGXXXXXXXXXXXXDTGFPTKSGPRRRRSGNAGSSAAARGQGRGXAXRGGEVGVGLVKRSMDIRVGRLELWPDPPVLGRISHLIRATVGAKDLSRGLSRRERARKLRRERGLSERPPGGEGALWPPVGDPLEELTELVWPSSELPALVVQLSVEEAACLLSFHGRALSELQLKRGLTIGVETYRPGLARRAMECRGLLRGLLLWDRTGSASGELACIISGLEGPHPSALKPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDEAETGGVELQWLFTGRV 542
            MPVKVIYRRPSKVRRLLLRVRV+SLTLRLADAARL+KVGTG EVLG TMPWGL PPRGHPIL LRLDGA+LAMVVREASGRRG GG                                                                         G GG     G MTEGAITLTVAS+RAEGSDAGVDK+RGVMLPILAVSP +PP RR   GS          G G+A   T +            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               S   GLEI+AKWTLEPLHGGXXXXXX                RR R G+ G+++ +           G  G   V R+  +  G        PV G++ ++  ATVGAKDLSRGLSRRER R+ RRERGL+ERPPGGEGA+WPPV DP+EELTELVWPSSELPAL V +SV+EAACLLSFHGR LSELQL+RGLTIGVET+R GL RRAMECRGLLRGLLLWDRTGSASGELACIISGL+GPHPSALKPA   XXXXXXXXXX                                 + EA   GVELQWLF GR+
Sbjct:  831 MPVKVIYRRPSKVRRLLLRVRVSSLTLRLADAARLKKVGTGAEVLGSTMPWGLDPPRGHPILELRLDGAVLAMVVREASGRRGAGGDVGRKGTGXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTSLPRLPSSGRRFERGGDARAAPSPAFLGAGGGGRAQGRMTEGAITLTVASIRAEGSDAGVDKARGVMLPILAVSPGRPPARRGSKGSDDGHRCAGGGGEGEARANTADDSFAADIGEASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSA-----------------------------SPAGGLEISAKWTLEPLHGGXXXXXX---------XXXXXARRRSRRGSFGATSNSNS---------GMCGQHRVLRASPVAGGFT------PV-GKVFNVEWATVGAKDLSRGLSRRERVRQFRRERGLNERPPGGEGAVWPPVDDPMEELTELVWPSSELPALEVNMSVDEAACLLSFHGRPLSELQLRRGLTIGVETFRQGLGRRAMECRGLLRGLLLWDRTGSASGELACIISGLDGPHPSALKPATAAXXXXXXXXXXSAPVESSAADAGFLEGGETAAFLLPRE------SAEAGNRGVELQWLFAGRI 1399

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5609.13943.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5609.13943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LME4_ECTSI	1.410e-164	65.34	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K463_9PHAE	3.140e-131	54.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..542
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 28..32
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..32
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 16..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5609	contig	L-elsbetiae_contig5609:6082..12028 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5609.13943.1	mRNA_L-elsbetiae_contig5609.13943.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5609 6082..12028 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5609.13943.1 ID=prot_L-elsbetiae_contig5609.13943.1|Name=mRNA_L-elsbetiae_contig5609.13943.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=542bp
MPVKVIYRRPSKVRRLLLRVRVASLTLRLADAARLRKVGTGPEVLGGTMP
WGLGPPRGHPILSLRLDGAMLAMVVREASGRRGGGGSGLGGHGVMTEGAI
TLTVASVRAEGSDAGVDKSRGVMLPILAVSPKPPLRRRRDGSGNGDANVT
TGEDDDDAAAAAAAAAAAAAAASDTPDNSFAADVREASSSVLGAGGGGAG
ASSPGGAGVDGGFAAPPAPARASSSPPSSGSGLEIAAKWTLEPLHGGGGG
GGSGGGGGGDTGFPTKSGPRRRRSGNAGSSAAARGQGRGGAGRGGEVGVG
LVKRSMDIRVGRLELWPDPPVLGRISHLIRATVGAKDLSRGLSRRERARK
LRRERGLSERPPGGEGALWPPVGDPLEELTELVWPSSELPALVVQLSVEE
AACLLSFHGRALSELQLKRGLTIGVETYRPGLARRAMECRGLLRGLLLWD
RTGSASGELACIISGLEGPHPSALKPAAAAAAAAAASAAAQGSAAPAATG
GFMEGGETAAFLLPRGGGGGGGATDEAETGGVELQWLFTGRV