prot_L-elsbetiae_contig5360.13553.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5360.13553.1
Unique Nameprot_L-elsbetiae_contig5360.13553.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length61
Homology
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BLAST of mRNA_L-elsbetiae_contig5360.13553.1 vs. uniprot
Match: D7FQI5_ECTSI (PseudoU_synth_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQI5_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.800e-14
Identity = 37/64 (57.81%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:    6 PSTAELDGKTTEKPP--------TTCVFCGTHFPTRSSMFRHLERPSTTCAAPRKDRGEKVFLV 61
            PS A    +T+E PP        TTC FC   FPTRS+MFRHLERP  TC APR+D GEKV LV
Sbjct:   10 PSEAAAGDRTSETPPSPKRAPPVTTCSFCSERFPTRSAMFRHLERPCATCPAPREDYGEKVLLV 73
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5360.13553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQI5_ECTSI1.800e-1457.81PseudoU_synth_1 domain-containing protein n=2 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5360contigL-elsbetiae_contig5360:12391..12573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5360.13553.1mRNA_L-elsbetiae_contig5360.13553.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5360 12135..12573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5360.13553.1 ID=prot_L-elsbetiae_contig5360.13553.1|Name=mRNA_L-elsbetiae_contig5360.13553.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp
MPPHGPSTAELDGKTTEKPPTTCVFCGTHFPTRSSMFRHLERPSTTCAAP
RKDRGEKVFLV
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