prot_L-elsbetiae_contig531.13471.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig531.13471.1
Unique Nameprot_L-elsbetiae_contig531.13471.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length452
Homology
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: D8LRU5_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU5_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 7.140e-93
Identity = 221/363 (60.88%), Postives = 234/363 (64.46%), Query Frame = 0
Query:    1 MDLHVHDAETDEPSQTPPXXXXXXXPVQFVQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANNLQQQTQRAQPSATPDAAGQGAQRATNGAS----ARQQPSQAGARLPPASG--TXXXXXAQQRGASSTSPSPHVAQAAGQAAQQNQRKVPAPQRPPVRSQQHQHPSQPTGAPRGRRNAPARSRQPHNGGGAGXXXXXXX--TTAAARTSGAMVGTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 355
            MDLHVHDAE DE SQ  P       PVQF QP     XXXXXXXXX                                      R+     PD      +RATNG      ARQQ +QAG R P  S         AQQR A+  S SP VAQAAGQAAQQNQR+ P  QRPP RSQQHQHPSQPTGAPRGRRN   RSRQ  NGGGAG         T+A ART GAMVGTGEALLN+RA+GGPA   DGKGA ASVPTAQEFDFQSELQKFDKEKELAKEMGGLS+ A  S+++ GGAGGATD VKKYNKSSFFDEIS DVLDRAAGR  RVTRAAE D N+DTFGT GL H  RRRGGRG
Sbjct:   76 MDLHVHDAEADEGSQAAPPPPPTA-PVQFAQPPQPTGXXXXXXXXXLLSPAFVSLLMM--------------------------RSCGQGNPDV-----RRATNGPQNGPPARQQATQAGQRQPAPSARPVPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLINGGGAGRGAAGGTSATSAPARTPGAMVGTGEALLNIRARGGPA--TDGKGA-ASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDSVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHA-RRRGGRG 402          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A7S2EC71_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EC71_TRICV)

HSP 1 Score: 70.1 bits (170), Expect = 5.390e-10
Identity = 57/141 (40.43%), Postives = 72/141 (51.06%), Query Frame = 0
Query:  220 AMVGTGEALLNVRAKGGPAGQA-DGKGATASVPTAQEFDFQSELQKFDKEKE-----LAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGR 354
            A VGTG +LL+ RA+G  AG   D +G         +FDF+S L KFDK  +       +   G   G+ +   A   AGG       Y+K  FFD IS D +DRA GRD+R+  A E   N +TFG   L H  RR GGR
Sbjct:  105 AQVGTGASLLHRRARGAVAGSGPDVRG---------DFDFESNLDKFDKGDDDXXXRXPEGDNGSDDGSYSDEDASETAGG----TPAYSKDDFFDSISCDAIDRAEGRDNRLRGAEERRLNTETFGAVSLGH-GRRGGGR 231          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A4D9D9H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.070e-9
Identity = 52/109 (47.71%), Postives = 62/109 (56.88%), Query Frame = 0
Query:  255 EFDFQSELQKFDKEKELAK-----EMGGLSMGAQASSSAVGGAGG--ATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRR-GGRG 355
            EFDF+S LQ F+KE+E+AK     E GG   G   SS   GGA G      VKKY+KSSFFD++S        G   R + A E   N+DTFG A LH+   RR GGRG
Sbjct:  192 EFDFESALQGFNKEEEMAKLSVKEETGGE--GGAVSSEGTGGAAGEGTIPEVKKYDKSSFFDDLST-----GPGAGGRPSMAEERKTNMDTFGVATLHNPQHRRYGGRG 293          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A8K1CKG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKG8_PYTOL)

HSP 1 Score: 68.2 bits (165), Expect = 8.720e-9
Identity = 54/146 (36.99%), Postives = 73/146 (50.00%), Query Frame = 0
Query:  213 AAARTSGA---MVGTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 355
            AAA+ SG    + G G+ LL  R +  P G     G   SV +  +F+F++ L  FDKE+E  K    LS+    +  +             Y KSSFFD IS D LDR  G+  R+T + E   N +TFG  GL++    RGGRG
Sbjct:  214 AAAQRSGGSRTIPGMGDHLLKRRERRVPGG-----GDPTSVTSGNDFNFENGLNDFDKEEEFNK----LSLDDNKAKGS-------------YQKSSFFDTISCDALDRLEGKQGRITASEERKLNTETFGAVGLNNRRSFRGGRG 337          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: M4BC25_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BC25_HYAAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-7
Identity = 52/134 (38.81%), Postives = 67/134 (50.00%), Query Frame = 0
Query:  223 GTGEALLNVRAKGGPAGQADGKGATASVPTAQ-EFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 355
            G G  LLN + + GP G  D  GA     TA  EF+F+++L  FDK++E +K      +       + G           Y KSSFFD IS D LDR  G+ +R+T A E   N +TFG  GL   N RR  RG
Sbjct:  209 GMGGHLLNRKERRGPGG-VDENGAGGRPETASCEFNFEAKLSDFDKQQEFSK------LEEDTKKESTG----------SYQKSSFFDTISCDALDRLEGQRARMTGAQERTLNTETFGAVGL---NNRRNFRG 322          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A2D4BKT8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKT8_PYTIN)

HSP 1 Score: 65.1 bits (157), Expect = 1.080e-7
Identity = 50/133 (37.59%), Postives = 67/133 (50.38%), Query Frame = 0
Query:  223 GTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 355
            G G+ LL  + +  P G     G   SV +  +F+F+  L+ FDKE+E +K    LS+     S A G           Y KSSFFD IS + LDR  G   R+T + E   N +TFG  GL++    RGGRG
Sbjct:  279 GMGDHLLKRKERRVPGG-----GDQTSVTSGSDFNFEXGLEGFDKEEEFSK----LSLN---ESKAKG----------SYQKSSFFDTISCEALDRLEGHHGRLTASEERKLNTETFGAVGLNNRRGYRGGRG 389          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: K3WC16_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC16_GLOUD)

HSP 1 Score: 64.3 bits (155), Expect = 1.190e-7
Identity = 48/133 (36.09%), Postives = 65/133 (48.87%), Query Frame = 0
Query:  223 GTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 355
            G G  LL  + +  P G+ D    TA++  A +F+F+  L  FDKE+E +K    LS+                +    Y KSSFFD IS D LDR  G   R++   E   N +TFG  GL++    RGGRG
Sbjct:  178 GMGGHLLKRKERRVPGGEHD---TTATLAAAGDFNFEERLNAFDKEEEFSK----LSV---------------EEPKTHYQKSSFFDTISCDALDRLEGNKGRMSGYEERKLNTETFGAVGLNNRRSFRGGRG 288          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A024GBP7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GBP7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.850e-7
Identity = 43/109 (39.45%), Postives = 54/109 (49.54%), Query Frame = 0
Query:  249 SVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNR--RRGGRG 355
            S+PT  +F+ +  L  FDKEKE  K     + G+                   Y KSSFFD IS D LDR  G   RV+ + E   N +TFG  GL++  R  RRGGRG
Sbjct:  231 SIPTVGDFNIEQALTGFDKEKEFEKLTVDEAQGS-------------------YQKSSFFDTISCDALDRLEGNRGRVSASDERRLNTETFGAVGLNNGRRNYRRGGRG 320          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A3F2RWG2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWG2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.430e-6
Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 0
Query:  214 AARTSGAMVGTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 355
            AART   + G G  LL  + +  P+G A+G G      +  EF+F   L  FDK++E +K    L    +            T+    Y KSSFFD IS D LDR  G+ +R++ A E   N +TFG  GL++    RGGRG
Sbjct:  145 AART---IPGMGGHLLKRKERRVPSG-AEGAGVGPDDASG-EFNFAEGLNDFDKQQEFSK----LEENTK------------TESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRG 265          
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A3R7GHF0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GHF0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.870e-6
Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 0
Query:  214 AARTSGAMVGTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 355
            AART   + G G  LL  + +  P+G A+G G      +  EF+F   L  FDK++E +K    L    +            T+    Y KSSFFD IS D LDR  G+ +R++ A E   N +TFG  GL++    RGGRG
Sbjct:  193 AART---IPGMGGHLLKRKERRVPSG-AEGAGVGPDDASG-EFNFAEGLNDFDKQQEFSK----LEENTK------------TESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRG 313          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LRU5_ECTSI7.140e-9360.88Novel Sm-like protein with long N-and C-terminal d... [more]
A0A7S2EC71_TRICV5.390e-1040.43Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
A0A4D9D9H3_9STRA2.070e-947.71Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8K1CKG8_PYTOL8.720e-936.99Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BC25_HYAAE1.080e-738.81Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A2D4BKT8_PYTIN1.080e-737.59Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
K3WC16_GLOUD1.190e-736.09Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024GBP7_9STRA5.850e-739.45Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A3F2RWG2_9STRA1.430e-636.62Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A3R7GHF0_9STRA1.870e-636.62Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019050FDF domainSMARTSM01199FDF_2coord: 250..343
e-value: 7.0E-12
score: 55.5
NoneNo IPR availablePANTHERPTHR13586SCD6 PROTEIN-RELATEDcoord: 2..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig531contigL-elsbetiae_contig531:6217..10593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig531.13471.1mRNA_L-elsbetiae_contig531.13471.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig531 6217..10593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig531.13471.1 ID=prot_L-elsbetiae_contig531.13471.1|Name=mRNA_L-elsbetiae_contig531.13471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=452bp
MDLHVHDAETDEPSQTPPPPAPQPAPVQFVQPPPPTVPPPPGVPPPLLSP
AFVAQQQQVQPPPPQQQVQRQAAPQANNLQQQTQRAQPSATPDAAGQGAQ
RATNGASARQQPSQAGARLPPASGTTAPPAAQQRGASSTSPSPHVAQAAG
QAAQQNQRKVPAPQRPPVRSQQHQHPSQPTGAPRGRRNAPARSRQPHNGG
GAGRGAANGATTAAARTSGAMVGTGEALLNVRAKGGPAGQADGKGATASV
PTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVK
KYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRR
RGGRGQNRNRGGGGGGGGGAGGIGAGGGNGGRGGGGRGGAGRGGGRGRGG
YAGGGRGGAVVGQDRRGGAGQARPRPRGGRGRGGNVGQGQRAAAAPQAQA
V*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019050FDF_dom