mRNA_L-elsbetiae_contig531.13471.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig531.13471.1
Unique NamemRNA_L-elsbetiae_contig531.13471.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: D8LRU5_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU5_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 7.140e-93
Identity = 221/363 (60.88%), Postives = 234/363 (64.46%), Query Frame = 1 
Query:    1 MDLHVHDAETDEPSQTPPXXXXXXXPVQFVQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANNLQQQTQRAQPSATPDAAGQGAQRATNGAS----ARQQPSQAGARLPPASG--TXXXXXAQQRGASSTSPSPHVAQAAGQAAQQNQRKVPAPQRPPVRSQQHQHPSQPTGAPRGRRNAPARSRQPHNGGGAGXXXXXXX--TTAAARTSGAMVGTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 1065
            MDLHVHDAE DE SQ  P       PVQF QP     XXXXXXXXX                                      R+     PD      +RATNG      ARQQ +QAG R P  S         AQQR A+  S SP VAQAAGQAAQQNQR+ P  QRPP RSQQHQHPSQPTGAPRGRRN   RSRQ  NGGGAG         T+A ART GAMVGTGEALLN+RA+GGPA   DGKGA ASVPTAQEFDFQSELQKFDKEKELAKEMGGLS+ A  S+++ GGAGGATD VKKYNKSSFFDEIS DVLDRAAGR  RVTRAAE D N+DTFGT GL H  RRRGGRG
Sbjct:   76 MDLHVHDAEADEGSQAAPPPPPTA-PVQFAQPPQPTGXXXXXXXXXLLSPAFVSLLMM--------------------------RSCGQGNPDV-----RRATNGPQNGPPARQQATQAGQRQPAPSARPVPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLINGGGAGRGAAGGTSATSAPARTPGAMVGTGEALLNIRARGGPA--TDGKGA-ASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDSVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHA-RRRGGRG 402
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A7S2EC71_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EC71_TRICV)

HSP 1 Score: 70.1 bits (170), Expect = 5.390e-10
Identity = 57/141 (40.43%), Postives = 72/141 (51.06%), Query Frame = 1 
Query:  658 AMVGTGEALLNVRAKGGPAGQA-DGKGATASVPTAQEFDFQSELQKFDKEKE-----LAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGR 1062
            A VGTG +LL+ RA+G  AG   D +G         +FDF+S L KFDK  +       +   G   G+ +   A   AGG       Y+K  FFD IS D +DRA GRD+R+  A E   N +TFG   L H  RR GGR
Sbjct:  105 AQVGTGASLLHRRARGAVAGSGPDVRG---------DFDFESNLDKFDKGDDDXXXRXPEGDNGSDDGSYSDEDASETAGG----TPAYSKDDFFDSISCDAIDRAEGRDNRLRGAEERRLNTETFGAVSLGH-GRRGGGR 231
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A4D9D9H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.070e-9
Identity = 52/109 (47.71%), Postives = 62/109 (56.88%), Query Frame = 1 
Query:  763 EFDFQSELQKFDKEKELAK-----EMGGLSMGAQASSSAVGGAGG--ATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRR-GGRG 1065
            EFDF+S LQ F+KE+E+AK     E GG   G   SS   GGA G      VKKY+KSSFFD++S        G   R + A E   N+DTFG A LH+   RR GGRG
Sbjct:  192 EFDFESALQGFNKEEEMAKLSVKEETGGE--GGAVSSEGTGGAAGEGTIPEVKKYDKSSFFDDLST-----GPGAGGRPSMAEERKTNMDTFGVATLHNPQHRRYGGRG 293
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A8K1CKG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKG8_PYTOL)

HSP 1 Score: 68.2 bits (165), Expect = 8.720e-9
Identity = 54/146 (36.99%), Postives = 73/146 (50.00%), Query Frame = 1 
Query:  637 AAARTSGA---MVGTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 1065
            AAA+ SG    + G G+ LL  R +  P G     G   SV +  +F+F++ L  FDKE+E  K    LS+    +  +             Y KSSFFD IS D LDR  G+  R+T + E   N +TFG  GL++    RGGRG
Sbjct:  214 AAAQRSGGSRTIPGMGDHLLKRRERRVPGG-----GDPTSVTSGNDFNFENGLNDFDKEEEFNK----LSLDDNKAKGS-------------YQKSSFFDTISCDALDRLEGKQGRITASEERKLNTETFGAVGLNNRRSFRGGRG 337
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: M4BC25_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BC25_HYAAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-7
Identity = 52/134 (38.81%), Postives = 67/134 (50.00%), Query Frame = 1 
Query:  667 GTGEALLNVRAKGGPAGQADGKGATASVPTAQ-EFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 1065
            G G  LLN + + GP G  D  GA     TA  EF+F+++L  FDK++E +K      +       + G           Y KSSFFD IS D LDR  G+ +R+T A E   N +TFG  GL   N RR  RG
Sbjct:  209 GMGGHLLNRKERRGPGG-VDENGAGGRPETASCEFNFEAKLSDFDKQQEFSK------LEEDTKKESTG----------SYQKSSFFDTISCDALDRLEGQRARMTGAQERTLNTETFGAVGL---NNRRNFRG 322
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A2D4BKT8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKT8_PYTIN)

HSP 1 Score: 65.1 bits (157), Expect = 1.080e-7
Identity = 50/133 (37.59%), Postives = 67/133 (50.38%), Query Frame = 1 
Query:  667 GTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 1065
            G G+ LL  + +  P G     G   SV +  +F+F+  L+ FDKE+E +K    LS+     S A G           Y KSSFFD IS + LDR  G   R+T + E   N +TFG  GL++    RGGRG
Sbjct:  279 GMGDHLLKRKERRVPGG-----GDQTSVTSGSDFNFEXGLEGFDKEEEFSK----LSLN---ESKAKG----------SYQKSSFFDTISCEALDRLEGHHGRLTASEERKLNTETFGAVGLNNRRGYRGGRG 389
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: K3WC16_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC16_GLOUD)

HSP 1 Score: 64.3 bits (155), Expect = 1.190e-7
Identity = 48/133 (36.09%), Postives = 65/133 (48.87%), Query Frame = 1 
Query:  667 GTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 1065
            G G  LL  + +  P G+ D    TA++  A +F+F+  L  FDKE+E +K    LS+                +    Y KSSFFD IS D LDR  G   R++   E   N +TFG  GL++    RGGRG
Sbjct:  178 GMGGHLLKRKERRVPGGEHD---TTATLAAAGDFNFEERLNAFDKEEEFSK----LSV---------------EEPKTHYQKSSFFDTISCDALDRLEGNKGRMSGYEERKLNTETFGAVGLNNRRSFRGGRG 288
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A024GBP7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GBP7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.850e-7
Identity = 43/109 (39.45%), Postives = 54/109 (49.54%), Query Frame = 1 
Query:  745 SVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNR--RRGGRG 1065
            S+PT  +F+ +  L  FDKEKE  K     + G+                   Y KSSFFD IS D LDR  G   RV+ + E   N +TFG  GL++  R  RRGGRG
Sbjct:  231 SIPTVGDFNIEQALTGFDKEKEFEKLTVDEAQGS-------------------YQKSSFFDTISCDALDRLEGNRGRVSASDERRLNTETFGAVGLNNGRRNYRRGGRG 320
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A3F2RWG2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWG2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.430e-6
Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 1 
Query:  640 AARTSGAMVGTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 1065
            AART   + G G  LL  + +  P+G A+G G      +  EF+F   L  FDK++E +K    L    +            T+    Y KSSFFD IS D LDR  G+ +R++ A E   N +TFG  GL++    RGGRG
Sbjct:  145 AART---IPGMGGHLLKRKERRVPSG-AEGAGVGPDDASG-EFNFAEGLNDFDKQQEFSK----LEENTK------------TESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRG 265
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BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Match: A0A3R7GHF0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GHF0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.870e-6
Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 1 
Query:  640 AARTSGAMVGTGEALLNVRAKGGPAGQADGKGATASVPTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVKKYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRRRGGRG 1065
            AART   + G G  LL  + +  P+G A+G G      +  EF+F   L  FDK++E +K    L    +            T+    Y KSSFFD IS D LDR  G+ +R++ A E   N +TFG  GL++    RGGRG
Sbjct:  193 AART---IPGMGGHLLKRKERRVPSG-AEGAGVGPDDASG-EFNFAEGLNDFDKQQEFSK----LEENTK------------TESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRG 313
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig531.13471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LRU5_ECTSI7.140e-9360.88Novel Sm-like protein with long N-and C-terminal d... [more]
A0A7S2EC71_TRICV5.390e-1040.43Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
A0A4D9D9H3_9STRA2.070e-947.71Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8K1CKG8_PYTOL8.720e-936.99Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BC25_HYAAE1.080e-738.81Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A2D4BKT8_PYTIN1.080e-737.59Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
K3WC16_GLOUD1.190e-736.09Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024GBP7_9STRA5.850e-739.45Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A3F2RWG2_9STRA1.430e-636.62Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A3R7GHF0_9STRA1.870e-636.62Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig531contigL-elsbetiae_contig531:6217..10593 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.8
Seed ortholog evalue8.6e-81
Seed eggNOG ortholog2880.D8LRU5
Preferred nameLSM14A
KEGG koko:K18749
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000242,GO:0000932,GO:0001817,GO:0001819,GO:0001959,GO:0001961,GO:0002218,GO:0002221,GO:0002252,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006417,GO:0006446,GO:0006950,GO:0006952,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0010647,GO:0015630,GO:0016043,GO:0017148,GO:0017151,GO:0019222,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0030029,GO:0030036,GO:0030522,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031347,GO:0031349,GO:0031369,GO:0031370,GO:0032268,GO:0032269,GO:0032991,GO:0033962,GO:0034063,GO:0034248,GO:0034249,GO:0034622,GO:0035556,GO:0035770,GO:0036464,GO:0039528,GO:0039529,GO:0043186,GO:0043207,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044764,GO:0045088,GO:0045089,GO:0045169,GO:0045495,GO:0045947,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051233,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0060293,GO:0060338,GO:0060340,GO:0060759,GO:0060760,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0097159,GO:0098542,GO:0098586,GO:1901363,GO:1904688,GO:1904689,GO:1990124,GO:1990904,GO:2000112,GO:2000113,GO:2000765,GO:2000766
EggNOG free text desc.cytoplasmic mRNA processing body assembly
EggNOG OGsKOG1073@1,KOG1073@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019
Ec32 ortholog descriptionNovel Sm-like protein with long N- and C-terminal domains.
Ec32 orthologEc-08_002480.1
Exons8
Model size1356
Cds size1356
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig531.13471.1prot_L-elsbetiae_contig531.13471.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig531 6217..10593 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816550.119987-CDS-L-elsbetiae_contig531:6216..66111622816550.119987-CDS-L-elsbetiae_contig531:6216..6611Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 6217..6611 -
1691683640.5008152-CDS-L-elsbetiae_contig531:6216..66111691683640.5008152-CDS-L-elsbetiae_contig531:6216..6611Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 6217..6611 -
1622816550.1329494-CDS-L-elsbetiae_contig531:6987..71471622816550.1329494-CDS-L-elsbetiae_contig531:6987..7147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 6988..7147 -
1691683640.5215676-CDS-L-elsbetiae_contig531:6987..71471691683640.5215676-CDS-L-elsbetiae_contig531:6987..7147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 6988..7147 -
1622816550.1440887-CDS-L-elsbetiae_contig531:7560..77041622816550.1440887-CDS-L-elsbetiae_contig531:7560..7704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 7561..7704 -
1691683640.5331287-CDS-L-elsbetiae_contig531:7560..77041691683640.5331287-CDS-L-elsbetiae_contig531:7560..7704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 7561..7704 -
1622816550.1547735-CDS-L-elsbetiae_contig531:7985..81081622816550.1547735-CDS-L-elsbetiae_contig531:7985..8108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 7986..8108 -
1691683640.5450287-CDS-L-elsbetiae_contig531:7985..81081691683640.5450287-CDS-L-elsbetiae_contig531:7985..8108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 7986..8108 -
1622816550.165888-CDS-L-elsbetiae_contig531:8570..88021622816550.165888-CDS-L-elsbetiae_contig531:8570..8802Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 8571..8802 -
1691683640.5584905-CDS-L-elsbetiae_contig531:8570..88021691683640.5584905-CDS-L-elsbetiae_contig531:8570..8802Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 8571..8802 -
1622816550.1840637-CDS-L-elsbetiae_contig531:9132..92721622816550.1840637-CDS-L-elsbetiae_contig531:9132..9272Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 9133..9272 -
1691683640.5686722-CDS-L-elsbetiae_contig531:9132..92721691683640.5686722-CDS-L-elsbetiae_contig531:9132..9272Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 9133..9272 -
1622816550.1952827-CDS-L-elsbetiae_contig531:9644..97701622816550.1952827-CDS-L-elsbetiae_contig531:9644..9770Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 9645..9770 -
1691683640.5781703-CDS-L-elsbetiae_contig531:9644..97701691683640.5781703-CDS-L-elsbetiae_contig531:9644..9770Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 9645..9770 -
1622816550.2096944-CDS-L-elsbetiae_contig531:10557..105931622816550.2096944-CDS-L-elsbetiae_contig531:10557..10593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 10558..10593 -
1691683640.5892856-CDS-L-elsbetiae_contig531:10557..105931691683640.5892856-CDS-L-elsbetiae_contig531:10557..10593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig531 10558..10593 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig531.13471.1

>prot_L-elsbetiae_contig531.13471.1 ID=prot_L-elsbetiae_contig531.13471.1|Name=mRNA_L-elsbetiae_contig531.13471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=452bp
MDLHVHDAETDEPSQTPPPPAPQPAPVQFVQPPPPTVPPPPGVPPPLLSP
AFVAQQQQVQPPPPQQQVQRQAAPQANNLQQQTQRAQPSATPDAAGQGAQ
RATNGASARQQPSQAGARLPPASGTTAPPAAQQRGASSTSPSPHVAQAAG
QAAQQNQRKVPAPQRPPVRSQQHQHPSQPTGAPRGRRNAPARSRQPHNGG
GAGRGAANGATTAAARTSGAMVGTGEALLNVRAKGGPAGQADGKGATASV
PTAQEFDFQSELQKFDKEKELAKEMGGLSMGAQASSSAVGGAGGATDGVK
KYNKSSFFDEISNDVLDRAAGRDSRVTRAAEADKNVDTFGTAGLHHVNRR
RGGRGQNRNRGGGGGGGGGAGGIGAGGGNGGRGGGGRGGAGRGGGRGRGG
YAGGGRGGAVVGQDRRGGAGQARPRPRGGRGRGGNVGQGQRAAAAPQAQA
V*
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mRNA from alignment at L-elsbetiae_contig531:6217..10593-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig531.13471.1 ID=mRNA_L-elsbetiae_contig531.13471.1|Name=mRNA_L-elsbetiae_contig531.13471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4377bp|location=Sequence derived from alignment at L-elsbetiae_contig531:6217..10593- (Laminarionema elsbetiae ELsaHSoW15)
ATGGATCTGCACGTGCACGATGCAGAAACCGATGAGGTGCGTGAGCTGGG
TTGGTTTCTCGGGGGGACTTTCGACGATGGTCAACGTGCCTGGTGTGGGT
GCCTCGGCAAGCCAATTTATTCTTGCTCAGGTTTGGCTGTGTGATTCCCA
TCTGTGTTGCTCTTGGAGAAAGGAGCATACACACGCAGCATATCGCAGTG
TCGTCCGAGCCTCATGCGAACACCATACGGTAGACTGACTCGAGAGGTAT
AGGTGTACTCTTTACTCTTTTTATGTACAAGAATGCGAAATATTTTGCGA
CTGCTTTGCTGCCAAGGAATACTCGGTCTGCTCTGTTCTGTCGTCTTTAC
ACCGTCCTCGATGTCTTGTTTTCAGCGCTTCATTGCTTCATTCAATGTGT
GTCTATACCTAACACAGCGCTCACCAATGGTTGTGCTTCCTCACATACTT
CGAAGTATGTACTAACCGCGACATCCGGGGATCTCGTCCCTTGGTTGAAG
TTTGTTGCGAGTGGTTAGGCACGCTAGAACTAACCGTGAGTGATTTCCAT
CCCCGGCTAGAGGTGCTGCTGAGCACCGGCAATGCCATCTGACCTGAACC
TCCCGTCGCGTAAGAGTAGGCGATGGCATGTCAAGCGCACACAAATAGAT
ACTTCTGATGCAACTAGTGCAGATACGTGACCTTGGCGCGGACTGCCCCA
ATCAATCCTCGAGCGGGCTTGACAGAGCGCTACGTTACAAGATGACAATC
GTGTTTTGACAAAACTCATCGGCTATGCCTCGGAAACTGCGGCGCGGTTT
TCTCTCTTGTCTGTTGTCAGCAGCCAAGCCAAACGCCGCCCCCGCCGGCA
CCGCAGCCCGCTCCGGTTCAGTTTGTGCAGCCGCCTCCGCCAACTGTCCC
TCCGCCTCCTGGTGTCCCCCCGCCTCTCCTGAGCCCTGCTTTCGTTGCGG
TGAGCATTCGTTACTGCTGATGGAGCGTTAGCTACCCTTGCTCGTGCTCA
TGGTCGACCCAGAGCTCGCGGTAAGCTCAATGTGTGGAGATGTTCAAGTT
GCCGATGAGCCCATGCATGGCACGAGGTTGTGTTGTTCGTGCTGCAAGCA
TAGAATATGCTGTCTCGTTTGATTGTATATATCTCACTCGAATATCTCTC
TTGAACGCTGCATTACCACCGTTTTGTTCAGGATGCGGGTGCTATGCCTC
CCCCGCACATGCTGCACCCGCAGCACCAGCACCAGCCATCCCATCCGCAG
AAGCAGTATCAGCCACCACCGCCACCGCTACCGCCGCCGCCGCCGCCGCC
GCCGCGCTGCAGCAGCAGCAGCAGCAGCAGCAAGTGCAGCCCCCCCCCCC
ACAACAGCAAGTGCAAAGGCAAGCGGCGCCACAGGCCAACAACCTCCAGC
AGCAGACGCAGCGGGCACAGCCAAGCGCCACGCCTGACGCTGCAGGACAA
GGCGCCCAAAGGTGACCATCCGCAATACGGCTTGCGGTTTTTCCTGTCGT
CCCCTGGAGAAGCGTGTACAGCGTTTTTTTCTGCTGGCGTGTGTCGGATG
GGGAGAAGGTGGATACTGCATGGCTTGCGTGGCTTCGAATGACGAGTGCT
CTTGCTAACAGGCGCCTCGTTGTTTCTCCACCTCCTTCCGCGTATGATAC
CTGTCGCAAAATATTTAAAAACAAAAAAACGCGGTTGGCTTTGGTTGTAT
GTATGACAATCCCTATTCGGCAGCTGATCCCGGCCGGCCTCGCTTATCAA
CGGTGTTTTGTGTTTTGCATACATGTCGCTCCTTTCTCCAGGGCTACGAA
TGGGGCTTCTGCTCGCCAGCAGCCTTCTCAGGCTGGCGCGCGGTTGCCCC
CTGCTTCGGGTACAACTGCGCCTCCAGCGGCGCAACAGCGTGGTGCCTCG
TCTACCTCGCCATCACCCCACGTGGCACAGGCAGCTGGGCAGGCTGCTCA
ACAGAACCAGCGCAAAGTACCTGCGCCGCAGAGGCCGCCCGTGCGTTCGC
AACAGCACCAGCACCCCTCGCAGGTGTGTTGAATATGCTTTTTTGTTATG
TTTCCGACCGAAAACACGTGTATTATGTGCCACGCGAAGAACAAGCCGCG
AGTCACGTTGCCGGAAGGGAATTGTATTTCGTGGCAGGGCGGTCAGTGAG
AGATATGTAGCAGTGGGATGCCCTCGTCCGTGTGCAGCTTGTCTGTATCT
CGGAGCCCCGCAGCTCGTGTGGCACTCTATGCTCTGCTTTCCCTCAAAGA
GTTTTTGATGGCAGCCAGATATGAAAGGCGCGTTTGTAGCCGAACTTTTC
CCCACACACCTCGCAAGCCGTCGTCTTTGCAGTGCGTGTCCTCACACCCT
TCCACGTATTCGTCAAGCAGTTGGTTTCCGATGGAAACATGGATACTCAC
CGTCGTTTCGCGACAGTCTTTCCCACTCACTCGTACGGCGCTTAAGTTTA
TTTCCACTACAATACTGTGTTTGCCTATCCTGCAGCCGACGGGAGCACCG
CGTGGGCGGAGAAATGCCCCCGCCAGGTCACGCCAGCCGCACAACGGTGG
TGGTGCGGGGAGAGGAGCAGCCAATGGTGCAACCACAGCCGCTGCGCGGA
CATCAGGGGTAAGTTTATGATGATTTTTGTTGAAGTGTCAAGCTTTTATC
TTCCCGGACGAGTATTGTTCCCGAGATGGAGGTCATATGTACCAGAAGCT
ACTCTGTAACACAAGTTTTGCTGCTGTTGCTCCTCAGCAGCAGTCGCAAG
TACCTAGGTTTTTGGCCTGGCCTTCAGTCTTCCAGAACATCCCCCACTGC
TGTCCCGTACATGAATGCTTATCTGTGGTCGCATTCATGAAATAAATCCT
CCTCGCTGATGTTGAAACCCGTTTATTCGCGGAACGAAGGCTATGGTTGG
CACCGGGGAAGCGCTGCTTAATGTCCGCGCTAAGGGCGGCCCAGCTGGGC
AAGCAGACGGCAAGGGGGCGACGGCGAGCGTTCCCACCGCGCAAGAGTTC
GACTTCCAGAGCGAGCTCCAGAAGTTCGACAAGGTGACAAGGTTGGAAAA
GACGTGTCCAGATTACAAGCCAAAGTTGTTGACTGAACACTTGTAGGCAA
AGCACAAGGCCCTAAGGTCTTGGATTTGCAGCCTGCGGTGTTCGATGAGG
CTCGAGGCTCGTGGGGCTGTCGGTTTGTACCCAAGATCACAGGTCCATCC
GTGCACTTATCACCGCCCGTCAGGCCTGGTGGTCGGTTTCCCCTTTTTCT
GGCTCCCGTTCTCGTTATTGTATTCAACGAGGTTGCAAGATGGATCACGT
TTTTGCGTTTTTCTGGCCTTGCTATTCATCCAGATGTGTGCAGACGTCCA
GCGTCCCTCATTCCCCGAAGAGATTGCTCATCGATGAATGCTTTAGTGTA
CGATATATCTCATCATCACTGCTGACTACTCGCTATGTCTTTGCAGGAGA
AGGAGCTAGCCAAAGAGATGGGTGGCCTAAGCATGGGTGCACAGGCATCC
AGTTCCGCGGTGGGGGGTGCTGGAGGGGCGACGGATGGCGTGAAGAAGTA
CAACAAGTCTTCCTTCTTCGACGAGATTTCGAATGACGTGTTGGACCGGG
CCGCAGGTGCGGGGGAAGTAGATTCAACGTGTTCCTGCGAGGCCGTGCTT
TTCCACTGAACGAACACACGTTGATTCTGGATTGTACGCTGTGCTGGGTT
AAATGCCCAAGCAAACACTCTGCGTGAAGTTGGCTTACTATATCCGTCTG
TCTCGTGTTTTGTGATCCCCAAAGGCATCGGTGTTCTCGGTCAGTCTTAT
TACGCGCTTTGAAGTTTCGATGGCTCAGAAAGTTGTTTTGTCTCAAGAAC
CTACCAGTTTATGCTCCTCGCAAATACTTGCTGTCGCCTGTTGCTCAAGC
ACTAACATTTTGTCGTTCTCGTGGCGCGTGCCCCGGTGTTGGACAATCGG
TGTGGGGCTGTGGTGCCCGAAAATAAAATCAGGGCGCGATTCGCGCGTCA
CGCGCGCGGCGGAGGCGGACAAAAACGTGGATACGTTTGGCACCGCCGGT
CTGCACCACGTCAACCGTCGCCGCGGCGGACGAGGCCAAAACAGGAACAG
AGGCGGAGGCGGAGGCGGAGGGGGGGGGGCAGGTGGTATTGGGGCAGGAG
GCGGAAACGGTGGACGGGGAGGGGGTGGCCGTGGAGGTGCGGGGAGGGGC
GGCGGCCGCGGAAGGGGTGGGTACGCTGGCGGTGGCAGGGGCGGCGCAGT
GGTGGGGCAAGACCGACGGGGGGGGGCGGGCCAGGCGCGCCCGCGGCCTA
GGGGTGGGAGGGGTAGAGGTGGTAACGTCGGCCAAGGGCAGCGGGCGGCC
GCGGCCCCCCAGGCTCAAGCGGTGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig531:6217..10593-

>mRNA_L-elsbetiae_contig531.13471.1 ID=mRNA_L-elsbetiae_contig531.13471.1|Name=mRNA_L-elsbetiae_contig531.13471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2712bp|location=Sequence derived from alignment at L-elsbetiae_contig531:6217..10593- (Laminarionema elsbetiae ELsaHSoW15)
ATGGATCTGCACGTGCACGATGCAGAAACCGATGAGATGGATCTGCACGT
GCACGATGCAGAAACCGATGAGCCAAGCCAAACGCCGCCCCCGCCGGCAC
CGCAGCCCGCTCCGGTTCAGTTTGTGCAGCCGCCTCCGCCAACTGTCCCT
CCGCCTCCTGGTGTCCCCCCGCCTCTCCTGAGCCCTGCTTTCGTTGCGCC
AAGCCAAACGCCGCCCCCGCCGGCACCGCAGCCCGCTCCGGTTCAGTTTG
TGCAGCCGCCTCCGCCAACTGTCCCTCCGCCTCCTGGTGTCCCCCCGCCT
CTCCTGAGCCCTGCTTTCGTTGCGCAGCAGCAGCAAGTGCAGCCCCCCCC
CCCACAACAGCAAGTGCAAAGGCAAGCGGCGCCACAGGCCAACAACCTCC
AGCAGCAGACGCAGCGGGCACAGCCAAGCGCCACGCCTGACGCTGCAGGA
CAAGGCGCCCAAAGCAGCAGCAGCAAGTGCAGCCCCCCCCCCCACAACAG
CAAGTGCAAAGGCAAGCGGCGCCACAGGCCAACAACCTCCAGCAGCAGAC
GCAGCGGGCACAGCCAAGCGCCACGCCTGACGCTGCAGGACAAGGCGCCC
AAAGGGCTACGAATGGGGCTTCTGCTCGCCAGCAGCCTTCTCAGGCTGGC
GCGCGGTTGCCCCCTGCTTCGGGTACAACTGCGCCTCCAGCGGCGCAACA
GCGTGGTGCCTCGTCTACCTCGCCATCACCCCACGTGGCACAGGCAGCTG
GGCAGGCTGCTCAACAGAACCAGCGCAAAGTACCTGCGCCGCAGAGGCCG
CCCGTGCGTTCGCAACAGCACCAGCACCCCTCGCAGGGCTACGAATGGGG
CTTCTGCTCGCCAGCAGCCTTCTCAGGCTGGCGCGCGGTTGCCCCCTGCT
TCGGGTACAACTGCGCCTCCAGCGGCGCAACAGCGTGGTGCCTCGTCTAC
CTCGCCATCACCCCACGTGGCACAGGCAGCTGGGCAGGCTGCTCAACAGA
ACCAGCGCAAAGTACCTGCGCCGCAGAGGCCGCCCGTGCGTTCGCAACAG
CACCAGCACCCCTCGCAGCCGACGGGAGCACCGCGTGGGCGGAGAAATGC
CCCCGCCAGGTCACGCCAGCCGCACAACGGTGGTGGTGCGGGGAGAGGAG
CAGCCAATGGTGCAACCACAGCCGCTGCGCGGACATCAGGGCCGACGGGA
GCACCGCGTGGGCGGAGAAATGCCCCCGCCAGGTCACGCCAGCCGCACAA
CGGTGGTGGTGCGGGGAGAGGAGCAGCCAATGGTGCAACCACAGCCGCTG
CGCGGACATCAGGGGCTATGGTTGGCACCGGGGAAGCGCTGCTTAATGTC
CGCGCTAAGGGCGGCCCAGCTGGGCAAGCAGACGGCAAGGGGGCGACGGC
GAGCGTTCCCACCGCGCAAGAGTTCGACTTCCAGAGCGAGCTCCAGAAGT
TCGACAAGGCTATGGTTGGCACCGGGGAAGCGCTGCTTAATGTCCGCGCT
AAGGGCGGCCCAGCTGGGCAAGCAGACGGCAAGGGGGCGACGGCGAGCGT
TCCCACCGCGCAAGAGTTCGACTTCCAGAGCGAGCTCCAGAAGTTCGACA
AGGAGAAGGAGCTAGCCAAAGAGATGGGTGGCCTAAGCATGGGTGCACAG
GCATCCAGTTCCGCGGTGGGGGGTGCTGGAGGGGCGACGGATGGCGTGAA
GAAGTACAACAAGTCTTCCTTCTTCGACGAGATTTCGAATGACGTGTTGG
ACCGGGCCGCAGGAGAAGGAGCTAGCCAAAGAGATGGGTGGCCTAAGCAT
GGGTGCACAGGCATCCAGTTCCGCGGTGGGGGGTGCTGGAGGGGCGACGG
ATGGCGTGAAGAAGTACAACAAGTCTTCCTTCTTCGACGAGATTTCGAAT
GACGTGTTGGACCGGGCCGCAGGGCGCGATTCGCGCGTCACGCGCGCGGC
GGAGGCGGACAAAAACGTGGATACGTTTGGCACCGCCGGTCTGCACCACG
TCAACCGTCGCCGCGGCGGACGAGGCCAAAACAGGAACAGAGGCGGAGGC
GGAGGCGGAGGGGGGGGGGCAGGTGGTATTGGGGCAGGAGGCGGAAACGG
TGGACGGGGAGGGGGTGGCCGTGGAGGTGCGGGGAGGGGCGGCGGCCGCG
GAAGGGGTGGGTACGCTGGCGGTGGCAGGGGCGGCGCAGTGGTGGGGCAA
GACCGACGGGGGGGGGCGGGCCAGGCGCGCCCGCGGCCTAGGGGTGGGAG
GGGTAGAGGTGGTAACGTCGGCCAAGGGCAGCGGGCGGCCGCGGCCCCCC
AGGCTCAAGCGGTGTGAGGCGCGATTCGCGCGTCACGCGCGCGGCGGAGG
CGGACAAAAACGTGGATACGTTTGGCACCGCCGGTCTGCACCACGTCAAC
CGTCGCCGCGGCGGACGAGGCCAAAACAGGAACAGAGGCGGAGGCGGAGG
CGGAGGGGGGGGGGCAGGTGGTATTGGGGCAGGAGGCGGAAACGGTGGAC
GGGGAGGGGGTGGCCGTGGAGGTGCGGGGAGGGGCGGCGGCCGCGGAAGG
GGTGGGTACGCTGGCGGTGGCAGGGGCGGCGCAGTGGTGGGGCAAGACCG
ACGGGGGGGGGCGGGCCAGGCGCGCCCGCGGCCTAGGGGTGGGAGGGGTA
GAGGTGGTAACGTCGGCCAAGGGCAGCGGGCGGCCGCGGCCCCCCAGGCT
CAAGCGGTGTGA
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