prot_L-elsbetiae_contig5303.13463.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5303.13463.1
Unique Name	prot_L-elsbetiae_contig5303.13463.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	138

Homology

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BLAST of mRNA_L-elsbetiae_contig5303.13463.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.710e-10
Identity = 39/121 (32.23%), Postives = 54/121 (44.63%), Query Frame = 0

Query:   34 DCIPCDVLFSELISTESGGHVQEVQMQLRGEPKSGTGMVHQWASGLLHHACDFLRRSFGENTCSMSWES------EDPDYMHRA-----------PTNRSLSFDPRLAAADAPCPCHNVDR 137
            +C PC+ +F +L      G  Q V++QLRGEPKSGT  + +WA   L   C+ L R +GE TC+  W        + P     A             NR          + +PCPC  VD+
Sbjct:   82 ECPPCETMFGKL-----NGAQQHVELQLRGEPKSGTSFMFEWAVNALMVTCEELGRLYGEGTCTFRWRGFFSRRKQKPVSPETALVDMKEVFFVFKPNRQHGRSSAGGPSASPCPCSTVDK 197

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5303.13463.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5303.13463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LJE4_ECTSI	2.710e-10	32.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 10..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..9
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 14..137

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5303	contig	L-elsbetiae_contig5303:5419..6615 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5303.13463.1	mRNA_L-elsbetiae_contig5303.13463.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5303 5419..6615 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5303.13463.1 ID=prot_L-elsbetiae_contig5303.13463.1|Name=mRNA_L-elsbetiae_contig5303.13463.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
MLLALPLAATVDGAPFPPQRRKNKDLPAAVLPADCIPCDVLFSELISTES
GGHVQEVQMQLRGEPKSGTGMVHQWASGLLHHACDFLRRSFGENTCSMSW
ESEDPDYMHRAPTNRSLSFDPRLAAADAPCPCHNVDR*