prot_L-elsbetiae_contig530.13458.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig530.13458.1
Unique Name	prot_L-elsbetiae_contig530.13458.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	345

Homology

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BLAST of mRNA_L-elsbetiae_contig530.13458.1 vs. uniprot
Match: D7G298_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G298_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.320e-104
Identity = 178/244 (72.95%), Postives = 197/244 (80.74%), Query Frame = 0

Query:  103 MAVKSANN-KWCTSLSPVSRFSKSASSSNSGNSSRNRGR-EKSSALESGLAKLTLCASSFAWMHGKRCIRGFQRWRMLPAEFREQLQMALHIYLRPAEGAAVADFFDVEKTGSVNGECFVRWFLQAGLDSREKRLRAQAAKDHEEQRLREERXXXXXXXXXXXNASAVETEFSAEDRAAALLLLGKIALSYHDQRSGHEAAQRDFACALGPVSFRLQLFRSFGIRLTDRQFAALFDIMDINRDR 344
            MAV+S    +  +S +  SR SKSAS+S        RGR +K SALESGLAKLTLCASSFAWMHGK+CIRGFQR +MLPAEFREQLQM+LHIYLRP+EGAAVA FFDV++ GSVNGE FVRWFLQAGLDSRE+RLRAQAA        R E            N +AVE EFSAEDRA+ALLLLGKIALSYHDQR+GHEAAQRDFACALGP++FRLQLFRSFGIRLTDRQFAALFD+MDINRDR
Sbjct:    1 MAVRSTRELQRISSSASSSRVSKSASTSTDSW----RGRWKKQSALESGLAKLTLCASSFAWMHGKQCIRGFQRVQMLPAEFREQLQMSLHIYLRPSEGAAVARFFDVQQVGSVNGEVFVRWFLQAGLDSREERLRAQAAVXXXXXXXRREGERAEVARKRDANTAAVEVEFSAEDRASALLLLGKIALSYHDQRTGHEAAQRDFACALGPMAFRLQLFRSFGIRLTDRQFAALFDVMDINRDR 240

[Close]

BLAST of mRNA_L-elsbetiae_contig530.13458.1 vs. uniprot
Match: A0A7S2GUE3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUE3_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.920e-7
Identity = 58/196 (29.59%), Postives = 88/196 (44.90%), Query Frame = 0

Query:  150 LAKLTLCASSFAWM-HGKRC-IRGFQRWRMLPAEFREQLQMALHIYLRPAEGAAVADFFDVEKTGSVNGECFVRWFLQAGLDSREKRLRAQAAKDHEEQRLREERXXXXXXXXXXXNASAVETEFSAEDRAAALLLLGKIALSYHDQRSGHEAAQRD-FACALGPVSFRLQLFRSFGIRLTDRQFAALFDIMDINR 342
            +AKL   A  F    HG R  + GF   R+ P + ++ L+ A  + L   E  A+   FD    G ++ + F R+FLQ  L +  +   AQA +D E + +                 S ++  F  EDRAA    L K +  +H ++  H+  Q D FA    P   ++ L    G+RL DR+ AAL   M  +R
Sbjct:   88 MAKLRRAAKIFDLKRHGARQQLDGFSGRRLSPNQLKDGLRRAFLLRLDDDEIQAIMFKFDSNGDGYMDTDEFARFFLQISLSAAAQPREAQANEDSEREIMSRREASAKNLEERNREKSLLDLAFRDEDRAAYQDKLEKASKWWH-RKHYHDQIQLDTFARKFSPTELQVALQNVLGVRLKDRELAALCSDMSRHR 282

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig530.13458.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig530.13458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G298_ECTSI	1.320e-104	72.95	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2GUE3_9STRA	3.920e-7	29.59	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 234..265

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig530	contig	L-elsbetiae_contig530:15786..19007 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig530.13458.1	mRNA_L-elsbetiae_contig530.13458.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig530 15786..19007 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig530.13458.1 ID=prot_L-elsbetiae_contig530.13458.1|Name=mRNA_L-elsbetiae_contig530.13458.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=345bp
MFARTSTGWELHSSRTRKRRLPWHLPFHDQPQPTPAMLASSQGDSSITGS
VSSCGLYSSGSRGGGCASLSTTSKKTMESLSASVYEELKPFRRAHRTLIK
NRMAVKSANNKWCTSLSPVSRFSKSASSSNSGNSSRNRGREKSSALESGL
AKLTLCASSFAWMHGKRCIRGFQRWRMLPAEFREQLQMALHIYLRPAEGA
AVADFFDVEKTGSVNGECFVRWFLQAGLDSREKRLRAQAAKDHEEQRLRE
ERQREEEARQREANASAVETEFSAEDRAAALLLLGKIALSYHDQRSGHEA
AQRDFACALGPVSFRLQLFRSFGIRLTDRQFAALFDIMDINRDR*