prot_L-elsbetiae_contig53.13450.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig53.13450.1
Unique Nameprot_L-elsbetiae_contig53.13450.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length255
Homology
BLAST of mRNA_L-elsbetiae_contig53.13450.1 vs. uniprot
Match: D7FXV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV0_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.980e-49
Identity = 119/256 (46.48%), Postives = 134/256 (52.34%), Query Frame = 0
Query:    1 QRLRLGRTTNSRIGAGVARGLPESQGGVHGRVAGGVSCMEFDSQGWQLAVAGEKSVTVYDFDTYVFENVQLKHTLVSGVQAYLQPTDGIKTAYTVSCVRWNPANEEQLAVSYHYHDEVEVYDLMTIEAGGSAKPVLTLKPSTTGPASDLGKGHFCLEFVRRGAPGKAVTHLVAGSRGGVFRVWRFFPKRATELAPFMQGQVSVSPRGA-ASRANVTAVCCLDPDVVLVGTDLGHLASYSLDPPKLKNFRSSKEADQ 255
            QRLR+G  +NS  G+GV RG P SQG + GR+AGGVSCMEFDS GWQLAV GE +VTVYDFD Y+ EN Q+K TL SGV+AYLQPTDGI+T  TVSCVRWNPAN +Q                                                                                           GQV+ S RG  ASRA VTAVCCL PDVVLVGTD G LA+YSL+ P +KNFRSSK ADQ
Sbjct:  311 QRLRMGCVSNSGTGSGVVRGHPASQG-LQGRIAGGVSCMEFDSVGWQLAVGGE-NVTVYDFDRYLPENQQVKRTLESGVRAYLQPTDGIQTKRTVSCVRWNPANGDQ-------------------------------------------------------------------------------------------GQVTASHRGGGASRAAVTAVCCLTPDVVLVGTDSGQLATYSLNLPVVKNFRSSKSADQ 473          
BLAST of mRNA_L-elsbetiae_contig53.13450.1 vs. uniprot
Match: A0A6H5JZC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC0_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.350e-15
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 QRLRLGRTTNSRIGAGVARGLPESQGGVHGRVAGGVSCMEFDSQGWQLAVAGEKSVTVYDFDTYVFE 67
            QRLR+G  +NS  G+GV RG P SQG + GR+AGGVSCMEFDS GWQLAV GE +VTVYDFD Y+ E
Sbjct:  143 QRLRMGCVSNSGTGSGVVRGHPASQG-LQGRIAGGVSCMEFDSVGWQLAVGGE-NVTVYDFDRYLPE 207          
BLAST of mRNA_L-elsbetiae_contig53.13450.1 vs. uniprot
Match: A0A830B0C2_9LAMI (Uncharacterized protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830B0C2_9LAMI)

HSP 1 Score: 55.8 bits (133), Expect = 2.030e-5
Identity = 49/158 (31.01%), Postives = 74/158 (46.84%), Query Frame = 0
Query:   29 HGRVAGGVSCMEFDSQGWQLA-VAGEKSVTVYDFDTYVFENVQLKHTLVSGVQAYLQPTDGIKTAYTVSCVRWNPANEEQLAVSYHYHDEVEVYDLMTIEAGGSAKPVLTLK--PSTTGPASDLGKGHFCLEFVRRGAPGKAVTHLVAGSRGGVFRVW 183
            H R   GVS +EFDS+G  LA V     +TV+DFDT     +Q   +     +  L     I T   +  VRWN AN++++A +     EV ++D+  I    S++PV  L+  P+ T    ++ KG   + F          + L+A    GV  VW
Sbjct:   36 HARPMQGVSSLEFDSKGVYLASVTKSGCLTVHDFDT-----IQGSDSKEDEAKQLLH----ISTCQQLDVVRWNLANQDEIACTSMKSSEVHIFDIGYI----SSEPVEVLRKRPNITVHGFNVHKGFSDIAF-----SSDDNSRLLASDSNGVINVW 175          
BLAST of mRNA_L-elsbetiae_contig53.13450.1 vs. uniprot
Match: A0A164STU0_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164STU0_DAUCS)

HSP 1 Score: 55.5 bits (132), Expect = 3.240e-5
Identity = 49/163 (30.06%), Postives = 80/163 (49.08%), Query Frame = 0
Query:   35 GVSCMEFDSQGWQLAVAGEKS-VTVYDFDT-YVFENVQLKHTLVSGVQAYLQPTDGIKTAYTVSCVRWNPANEEQLAVSYHYHDEVEVYDLMTIEAGGSAKPVLTLK--PSTTGPASDLGKGHFCLEFVRRGAPGKAVTHLVAGSRGGVFRVWRFFPKRATEL 193
            GVSC+E DS+G  LA A +   ++V+DFDT Y      +        +  L     I T + +  VRWN AN++++A +     EV ++D+  +    S++PV  L+  PS +   S + KG   + F  R       + ++A    GV  VW    +R++EL
Sbjct:   91 GVSCLELDSKGIYLASATKLGCLSVHDFDTLYCQATTPIPDLKEDETKHVLH----INTGHQIDVVRWNIANQDEVACTSMRSSEVYIFDIGYM----SSEPVKVLRKRPSVSIHGSGVHKGLSDVAFTSRDD-----SRVLASDTHGVVNVW---DRRSSEL 237          
BLAST of mRNA_L-elsbetiae_contig53.13450.1 vs. uniprot
Match: A0A5B7C8D2_DAVIN (Uncharacterized protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7C8D2_DAVIN)

HSP 1 Score: 55.1 bits (131), Expect = 4.430e-5
Identity = 44/152 (28.95%), Postives = 74/152 (48.68%), Query Frame = 0
Query:   35 GVSCMEFDSQG-WQLAVAGEKSVTVYDFDTYVFENVQLKHTLVSGVQAYLQPTDGIKTAYTVSCVRWNPANEEQLAVSYHYHDEVEVYDLMTIEAGGSAKPVLTL--KPSTTGPASDLGKGHFCLEFVRRGAPGKAVTHLVAGSRGGVFRVW 183
            G+S +EFD++G + ++V     +TV+DF+T   +  ++   L      ++     I T   +  VRWN AN++++A +     EV ++D+  I    S++PV  L  KP+ T    D  KG   + F     P    + L+A    GV  VW
Sbjct:  114 GISALEFDTKGIYLVSVTKLGCLTVHDFETLFCQGNEISPCLKEDETKHVLH---ISTCQQLDVVRWNLANQDEVACTSMKSSEVRIFDIGYI----SSEPVEVLRKKPTVTVHGHDDHKGLSDIAF-----PSNDDSRLLASDTCGVINVW 253          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig53.13450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXV0_ECTSI1.980e-4946.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZC0_9PHAE2.350e-1568.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A830B0C2_9LAMI2.030e-531.01Uncharacterized protein n=1 Tax=Phtheirospermum ja... [more]
A0A164STU0_DAUCS3.240e-530.06Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A5B7C8D2_DAVIN4.430e-528.95Uncharacterized protein (Fragment) n=1 Tax=Davidia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 29..254
e-value: 5.8E-10
score: 40.3
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 34..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig53contigL-elsbetiae_contig53:19409..21690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig53.13450.1mRNA_L-elsbetiae_contig53.13450.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig53 19408..21690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig53.13450.1 ID=prot_L-elsbetiae_contig53.13450.1|Name=mRNA_L-elsbetiae_contig53.13450.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
QRLRLGRTTNSRIGAGVARGLPESQGGVHGRVAGGVSCMEFDSQGWQLAV
AGEKSVTVYDFDTYVFENVQLKHTLVSGVQAYLQPTDGIKTAYTVSCVRW
NPANEEQLAVSYHYHDEVEVYDLMTIEAGGSAKPVLTLKPSTTGPASDLG
KGHFCLEFVRRGAPGKAVTHLVAGSRGGVFRVWRFFPKRATELAPFMQGQ
VSVSPRGAASRANVTAVCCLDPDVVLVGTDLGHLASYSLDPPKLKNFRSS
KEADQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf