prot_L-elsbetiae_contig5295.13438.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5295.13438.1
Unique Nameprot_L-elsbetiae_contig5295.13438.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length194
Homology
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: D7FH71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH71_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.070e-69
Identity = 123/182 (67.58%), Postives = 140/182 (76.92%), Query Frame = 0
Query:    9 SHDHGSSLSSATDLSSSASAAALDMDMGDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKDGSKALTEEMGSSGTPCCNNNT 190
            SHDHGS  S A+ ++SS +      DMGD+FC+G G VML GFQ A S S RC+LFLFEGA VDT+TKYAFA +GAF MGF NEMIRYGRDRM K       SDVK T AFAVQ+FLAYMLMLLVMLYEYVILI +I GL+AGHLVTLRL+A +RRAA KDG+K  +   GSSGTPCCN+ T
Sbjct:   29 SHDHGSHSSDASSMASSMT------DMGDQFCEGDGTVMLMGFQAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEMIRYGRDRMAKASGVCVGSDVKATFAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGAKEASGVAGSSGTPCCNSAT 204          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: D7FWU3_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWU3_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 1.170e-65
Identity = 113/158 (71.52%), Postives = 127/158 (80.38%), Query Frame = 0
Query:   36 GDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKD-GSKALTEEMGSSGTPCCNNNTCA 192
            GD+FC G G VML GFQ A S S  C+LFLFEGA VDT+TKYAFA +GAF MGF NEMIRYGRDRM KT D S ASD+K TAAFAVQI+LAYMLMLLVMLYEYVILI +I GL+ GHL+TLR +A +RRAA +D G+K   E MGSSGTPCCN +T A
Sbjct:   23 GDQFCNGDGTVMLMGFQSATSASVNCILFLFEGAGVDTKTKYAFAALGAFFMGFANEMIRYGRDRMAKTSDVSLASDLKMTAAFAVQIYLAYMLMLLVMLYEYVILIMIISGLATGHLLTLRWSAGRRRAALRDAGAKTPPEVMGSSGTPCCNTDTVA 180          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A835YQY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQY3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.350e-21
Identity = 83/204 (40.69%), Postives = 99/204 (48.53%), Query Frame = 0
Query:    9 SHDHGSSLSSATDLSSSASAAALDMDMGDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLV----TLRLTAPQRRAAAK-----------------DG--SKAL-TEEMGSSGTPCCNN 188
            SH HG   SS  D      AAA        FC GSG VM NGFQ + +  + CV++LF GA +DT+ KYA AVIG FL+ F NE +R+ R RM     P         A    Q+  AY LMLL MLYE V+   ++LGL AG+        R    QR AA K                 DG  +KAL T    SS TPCC N
Sbjct:    5 SHMHGGGGSSGVDQMGXXXAAA------STFCTGSGTVMQNGFQTSFTNGS-CVIWLFPGAILDTEGKYAAAVIGTFLLAFGNEGLRWLRTRMAAEQAPPXXXXXPSLALSVAQMVNAYWLMLLTMLYESVMFSMIVLGLMAGYFAFNYGDARAARKQRSAATKGLGADDSSAEVSPEGSDDGMNAKALPTATFVSSSTPCCTN 201          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A9UVZ5_MONBE (Copper transport protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVZ5_MONBE)

HSP 1 Score: 87.8 bits (216), Expect = 1.820e-18
Identity = 67/170 (39.41%), Postives = 91/170 (53.53%), Query Frame = 0
Query:   31 LDMDMG---DEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRM-TKTLDPSTASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAK---DGSK--ALTE--EMGSSGTPCCNNN 189
            +D DMG   + FC GSG VM +GF  A S    C +FLF    +DT  KYA A+IG F MG  NE+ R+ R+R+  +        D+    ++ + +  AY LMLLVMLYE +  + +ILGL+ G  V  +L    R+  A    DG K  ALT   +  S  +PCC  N
Sbjct:    3 MDDDMGMPSNGFCSGSGMVMNDGFGRAPSF---CPIFLFHNVVIDTAGKYAIALIGTFCMGLFNELFRWYRNRLEAQESTRPILQDLCVALSYGIHMLNAYFLMLLVMLYESLFFVMIILGLATGSFVVRQLQRHVRKVGAYQDLDGRKPSALTPIVQTPSGTSPCCGGN 169          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A835YUT5_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT5_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.130e-17
Identity = 65/176 (36.93%), Postives = 98/176 (55.68%), Query Frame = 0
Query:   22 LSSSASAAALDMDMG-DEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPST----------ASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKDGSKALT--EEMGSSGTP 184
            + S A++    M MG  +FC+G+G VM  GF+ + + +  C+++LFEGA +DT  KY  AVIG FL+ F NE IR+ R R      P T          A DV     +  Q+ +AY LML+VM YE  +   ++LGL+AG+L T      + + AA D + A++  + +GS+  P
Sbjct:    5 MPSMATSMPTTMPMGTSDFCEGTGMVMQKGFRVSFT-NGMCIIWLFEGAVLDTAGKYTGAVIGTFLLAFANEGIRWLRSRAMSGKAPFTRCHLSDMPAFARDVVLALMYGFQMLIAYWLMLIVMTYEVFLFTAILLGLTAGYL-TFNYVDRRAKEAATDCNCAVSAAKTVGSNTPP 178          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: W7U9L9_9STRA (Copper transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9L9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.880e-15
Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 0
Query:   35 MGDE--FCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGR-----DRMTKTL-----------DPSTASDVK----KTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGH 152
            MGD   FCQG G VM NGF F   +   C+L+LF+GA V+T  KYA A+IG F + F+ E +R+ R      R T  L            P   + V     +   F V +F+AY++MLLVMLYE+ I I L+LGL+AG+
Sbjct:   64 MGDSGGFCQGEGSVMNNGFVFMPQDGY-CILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGY 202          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A819B819_9BILA (Copper transport protein n=7 Tax=Adineta steineri TaxID=433720 RepID=A0A819B819_9BILA)

HSP 1 Score: 78.6 bits (192), Expect = 4.990e-15
Identity = 60/163 (36.81%), Postives = 83/163 (50.92%), Query Frame = 0
Query:   31 LDMDMGDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTA---SDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAA-KDGSKALTEEMGSSGTPCCNNN 189
            + MDM    C     VM NGFQ A  +   C+LFLF+G  VDT  KYAF +IG   MG  N  + Y R  +      +++     +  +  +A+QI LAY +MLLVM YE  I I LI GL  GH +   + A  R + + +  +   T +   + TPCC  N
Sbjct:    1 MKMDMDMSMCM----VMQNGFQVANGKDG-CILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYIRHCLVNNSKHTSSLLIHQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLIGGLVLGHFIFGYIEAKNRSSTSIQPETTNTTFQNQFNSTPCCQTN 158          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A815NM06_9BILA (Copper transport protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815NM06_9BILA)

HSP 1 Score: 77.4 bits (189), Expect = 3.060e-13
Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 0
Query:   46 VMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKK---TAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAA-KDGSKALTEEMGSSGTPCCNNN 189
            VM NGFQ A  +   C+LFLF+G  VDT  KYAF +IG   MG  N  + Y R  +      +++  + +   +  +A+QI LAY +MLLVM YE  I I LI GL  GH +   + A  R + + +  +   T +   + TPCC  N
Sbjct:  288 VMQNGFQVANGKDG-CILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYVRHCLVNNSKHTSSLFIHQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLICGLVLGHFIFGYIEAKNRSSTSIQPETTNTTFQNQFNSTPCCQTN 434          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A7S4MPK0_9EUKA (Copper transport protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MPK0_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 3.220e-13
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 0
Query:   35 MGDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTAS-DVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKDGSKALTEEMGSSGTPCCNNN 189
            M   FC G G+VM  GFQ    +S  C++FLF G  +D   KY   ++ AF+MG +NE+  Y R  +   ++       +   A +   + LAY LMLLVM YE +I I ++LGL+AGHL+      P+       GS           TPCC  +
Sbjct:    1 MSSTFCSG-GKVMQPGFQ-TTMQSGNCIIFLFSGFVLDEPWKYGVGILLAFMMGLSNELFLYLRRWVAAQIENKHKLWRIAICAIYGAHMTLAYWLMLLVMTYETLIFIAIVLGLAAGHLLFQFAPLPKTDTHNIQGS-----------TPCCGGS 143          
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A0L0D9P1_THETB (Copper transport protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9P1_THETB)

HSP 1 Score: 73.2 bits (178), Expect = 1.210e-12
Identity = 62/190 (32.63%), Postives = 89/190 (46.84%), Query Frame = 0
Query:   39 FCQGSGQVMLNGFQFAAS-----ESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMT---------------KTLDPSTAS--------DVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQR-----------RAAAKDGSKALTEEMGSSGTPCCNNN 189
            FC+G G+VM+ GFQ   +     E   C+L+LF+GA VDT  KYA A IG+F +      ++  R+R++                   PS  S        D+   A FA+Q+ LAY +MLLVMLYE  I   +I+G     L+ +RL    R           +A    GSK  T    ++ +PCC  +
Sbjct:    2 FCKGMGRVMMPGFQTTYNPSKMIEGNSCILWLFQGAVVDTPGKYALACIGSFSLVLAMVFLQLVRERVSLWASRRSSSXXXXXXXXXXPSLCSGGLPMLGLDLAVAALFALQMVLAYWIMLLVMLYEAWIFTSIIIGFFVSQLLAIRLRRRWRERTCGCPSSSEQAPLVAGSKMDTVHAAAASSPCCGGD 191          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FH71_ECTSI1.070e-6967.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWU3_ECTSI1.170e-6571.52Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YQY3_9STRA4.350e-2140.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A9UVZ5_MONBE1.820e-1839.41Copper transport protein n=1 Tax=Monosiga brevicol... [more]
A0A835YUT5_9STRA4.130e-1736.93Copper transport protein n=1 Tax=Tribonema minus T... [more]
W7U9L9_9STRA4.880e-1542.14Copper transport protein n=3 Tax=Monodopsidaceae T... [more]
A0A819B819_9BILA4.990e-1536.81Copper transport protein n=7 Tax=Adineta steineri ... [more]
A0A815NM06_9BILA3.060e-1337.84Copper transport protein n=1 Tax=Adineta steineri ... [more]
A0A7S4MPK0_9EUKA3.220e-1335.26Copper transport protein n=1 Tax=Vannella sp. CB-2... [more]
A0A0L0D9P1_THETB1.210e-1232.63Copper transport protein n=1 Tax=Thecamonas trahen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 111..154
e-value: 1.0E-6
score: 29.4
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 6..187
NoneNo IPR availablePANTHERPTHR12483:SF27COPPER TRANSPORTER 1A, ISOFORM C-RELATEDcoord: 6..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 161..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..116
NoneNo IPR availableTMHMMTMhelixcoord: 77..94
NoneNo IPR availableTMHMMTMhelixcoord: 123..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5295contigL-elsbetiae_contig5295:1861..6659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5295.13438.1mRNA_L-elsbetiae_contig5295.13438.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5295 1810..6702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5295.13438.1 ID=prot_L-elsbetiae_contig5295.13438.1|Name=mRNA_L-elsbetiae_contig5295.13438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MSGHTSHTSHDHGSSLSSATDLSSSASAAALDMDMGDEFCQGSGQVMLNG
FQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDR
MTKTLDPSTASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSA
GHLVTLRLTAPQRRAAAKDGSKALTEEMGSSGTPCCNNNTCAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter