mRNA_L-elsbetiae_contig5295.13438.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: D7FH71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH71_ECTSI) HSP 1 Score: 219 bits (558), Expect = 4.830e-69 Identity = 122/182 (67.03%), Postives = 139/182 (76.37%), Query Frame = 2 Query: 74 DHGSSLSSATDLSSSASAAALDMDMGDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKDGSKALTEEMGSSGTPCCNNNTCA 619 DHGS S A+ ++SS + DMGD+FC+G G VML GFQ A S S RC+LFLFEGA VDT+TKYAFA +GAF MGF NEMIRYGRDRM K SDVK T AFAVQ+FLAYMLMLLVMLYEYVILI +I GL+AGHLVTLRL+A +RRAA KDG+K + GSSGTPCCN+ T A Sbjct: 31 DHGSHSSDASSMASSMT------DMGDQFCEGDGTVMLMGFQAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEMIRYGRDRMAKASGVCVGSDVKATFAFAVQMFLAYMLMLLVMLYEYVILIMIISGLAAGHLVTLRLSAGRRRAALKDGAKEASGVAGSSGTPCCNSATQA 206
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: D7FWU3_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWU3_ECTSI) HSP 1 Score: 210 bits (535), Expect = 6.380e-66 Identity = 113/158 (71.52%), Postives = 127/158 (80.38%), Query Frame = 2 Query: 149 GDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKD-GSKALTEEMGSSGTPCCNNNTCA 619 GD+FC G G VML GFQ A S S C+LFLFEGA VDT+TKYAFA +GAF MGF NEMIRYGRDRM KT D S ASD+K TAAFAVQI+LAYMLMLLVMLYEYVILI +I GL+ GHL+TLR +A +RRAA +D G+K E MGSSGTPCCN +T A Sbjct: 23 GDQFCNGDGTVMLMGFQSATSASVNCILFLFEGAGVDTKTKYAFAALGAFFMGFANEMIRYGRDRMAKTSDVSLASDLKMTAAFAVQIYLAYMLMLLVMLYEYVILIMIISGLATGHLLTLRWSAGRRRAALRDAGAKTPPEVMGSSGTPCCNTDTVA 180
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A835YQY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQY3_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 5.130e-21 Identity = 81/201 (40.30%), Postives = 97/201 (48.26%), Query Frame = 2 Query: 77 HGSSLSSATDLSSSASAAALDMDMGDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLV----TLRLTAPQRRAAAK-----------------DG--SKAL-TEEMGSSGTPCCNN 607 HG SS D AAA FC GSG VM NGFQ + + + CV++LF GA +DT+ KYA AVIG FL+ F NE +R+ R RM P A Q+ AY LMLL MLYE V+ ++LGL AG+ R QR AA K DG +KAL T SS TPCC N Sbjct: 8 HGGGGSSGVDQMGXXXAAA------STFCTGSGTVMQNGFQTSFTNGS-CVIWLFPGAILDTEGKYAAAVIGTFLLAFGNEGLRWLRTRMAAEQAPPXXXXXPSLALSVAQMVNAYWLMLLTMLYESVMFSMIVLGLMAGYFAFNYGDARAARKQRSAATKGLGADDSSAEVSPEGSDDGMNAKALPTATFVSSSTPCCTN 201
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A835YUT5_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.310e-17 Identity = 65/176 (36.93%), Postives = 98/176 (55.68%), Query Frame = 2 Query: 107 LSSSASAAALDMDMG-DEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPST----------ASDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKDGSKALT--EEMGSSGTP 595 + S A++ M MG +FC+G+G VM GF+ + + + C+++LFEGA +DT KY AVIG FL+ F NE IR+ R R P T A DV + Q+ +AY LML+VM YE + ++LGL+AG+L T + + AA D + A++ + +GS+ P Sbjct: 5 MPSMATSMPTTMPMGTSDFCEGTGMVMQKGFRVSFT-NGMCIIWLFEGAVLDTAGKYTGAVIGTFLLAFANEGIRWLRSRAMSGKAPFTRCHLSDMPAFARDVVLALMYGFQMLIAYWLMLIVMTYEVFLFTAILLGLTAGYL-TFNYVDRRAKEAATDCNCAVSAAKTVGSNTPP 178
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A819B819_9BILA (Copper transport protein n=7 Tax=Adineta steineri TaxID=433720 RepID=A0A819B819_9BILA) HSP 1 Score: 80.1 bits (196), Expect = 2.690e-15 Identity = 60/163 (36.81%), Postives = 83/163 (50.92%), Query Frame = 2 Query: 134 LDMDMGDEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTA---SDVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAA-KDGSKALTEEMGSSGTPCCNNN 610 + MDM C VM NGFQ A + C+LFLF+G VDT KYAF +IG MG N + Y R + +++ + + +A+QI LAY +MLLVM YE I I LI GL GH + + A R + + + + T + + TPCC N Sbjct: 1 MKMDMDMSMCM----VMQNGFQVANGKDG-CILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYIRHCLVNNSKHTSSLLIHQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLIGGLVLGHFIFGYIEAKNRSSTSIQPETTNTTFQNQFNSTPCCQTN 158
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: W7U9L9_9STRA (Copper transport protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9L9_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 5.370e-15 Identity = 67/173 (38.73%), Postives = 90/173 (52.02%), Query Frame = 2 Query: 146 MGDE--FCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGR-----DRMTKTL-----------DPSTASDVK----KTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKDGSKALTEEMGSSGTPC 598 MGD FCQG G VM NGF F + C+L+LF+GA V+T KYA A+IG F + F+ E +R+ R R T L P + V + F V +F+AY++MLLVMLYE+ I I L+LGL+AG+ T + R A K L +G+ G C Sbjct: 64 MGDSGGFCQGEGSVMNNGFVFMPQDGY-CILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYF-TFEMWEAYRVA----NKKQLPSAIGAIGGGC 230
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A815NM06_9BILA (Copper transport protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815NM06_9BILA) HSP 1 Score: 79.0 bits (193), Expect = 1.890e-13 Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 179 VMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKK---TAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAA-KDGSKALTEEMGSSGTPCCNNN 610 VM NGFQ A + C+LFLF+G VDT KYAF +IG MG N + Y R + +++ + + + +A+QI LAY +MLLVM YE I I LI GL GH + + A R + + + + T + + TPCC N Sbjct: 288 VMQNGFQVANGKDG-CILFLFQGWNVDTHVKYAFMLIGVICMGLLNGALAYVRHCLVNNSKHTSSLFIHQIYLSLLYAIQIVLAYWMMLLVMTYETGIFISLICGLVLGHFIFGYIEAKNRSSTSIQPETTNTTFQNQFNSTPCCQTN 434
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A0L0D9P1_THETB (Copper transport protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9P1_THETB) HSP 1 Score: 74.7 bits (182), Expect = 6.390e-13 Identity = 62/190 (32.63%), Postives = 89/190 (46.84%), Query Frame = 2 Query: 158 FCQGSGQVMLNGFQFAAS-----ESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMT---------------KTLDPSTAS--------DVKKTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQR-----------RAAAKDGSKALTEEMGSSGTPCCNNN 610 FC+G G+VM+ GFQ + E C+L+LF+GA VDT KYA A IG+F + ++ R+R++ PS S D+ A FA+Q+ LAY +MLLVMLYE I +I+G L+ +RL R +A GSK T ++ +PCC + Sbjct: 2 FCKGMGRVMMPGFQTTYNPSKMIEGNSCILWLFQGAVVDTPGKYALACIGSFSLVLAMVFLQLVRERVSLWASRRSSSXXXXXXXXXXPSLCSGGLPMLGLDLAVAALFALQMVLAYWIMLLVMLYEAWIFTSIIIGFFVSQLLAIRLRRRWRERTCGCPSSSEQAPLVAGSKMDTVHAAAASSPCCGGD 191
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: W7TTP6_9STRA (Copper transport protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTP6_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.660e-9 Identity = 54/150 (36.00%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 209 SESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGR-----DRMTKTL-----------DPSTASDVK----KTAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGHLVTLRLTAPQRRAAAKDGSKALTEEMGSSGTPC 598 S+ C+L+LF+GA V+T KYA A+IG F + F+ E +R+ R R T L P + V + F V +F+AY++MLLVMLYE+ I I L+LGL+AG+ T + R A K L +G+ G C Sbjct: 28 SQDGYCILYLFQGAVVNTAGKYAGALIGTFFLAFSVEALRHFRLWMRLRRATVVLAHGEKEGEVVTGPPLRAQVLPIFLEALLFGVHMFVAYLIMLLVMLYEWAIFISLLLGLAAGYF-TFEMWEAYRVA----NKKQLPSAIGAIGGGC 172
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Match: A0A6G0X8Y7_9STRA (Copper transport protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8Y7_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.670e-7 Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 2 Query: 152 DEFCQGSGQVMLNGFQFAASESARCVLFLFEGAAVDTQTKYAFAVIGAFLMGFTNEMIRYGRDRMTKTLDPSTASDVKK------TAAFAVQIFLAYMLMLLVMLYEYVILIFLILGLSAGH 499 + FC GS M +GFQ ++ CV LF+ +++QTKYAF +IG FL+ NE + + R+R+ + S+ K T + Q+ LAY ML+VM+Y+ + I LI G G+ Sbjct: 218 EPFCSGSS-AMFSGFQ--STVHGTCVKLLFQPWVLNSQTKYAFGMIGVFLLPLMNEFLVFSRERLRQKFRVSSRGGAKYKNKLILTTLYMAQMTLAYFAMLVVMIYDTGLFIALIGGFGFGY 336 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5295.13438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5295.13438.1 >prot_L-elsbetiae_contig5295.13438.1 ID=prot_L-elsbetiae_contig5295.13438.1|Name=mRNA_L-elsbetiae_contig5295.13438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp MSGHTSHTSHDHGSSLSSATDLSSSASAAALDMDMGDEFCQGSGQVMLNGback to top mRNA from alignment at L-elsbetiae_contig5295:1810..6702- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5295.13438.1 ID=mRNA_L-elsbetiae_contig5295.13438.1|Name=mRNA_L-elsbetiae_contig5295.13438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4893bp|location=Sequence derived from alignment at L-elsbetiae_contig5295:1810..6702- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5295:1810..6702- >mRNA_L-elsbetiae_contig5295.13438.1 ID=mRNA_L-elsbetiae_contig5295.13438.1|Name=mRNA_L-elsbetiae_contig5295.13438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1164bp|location=Sequence derived from alignment at L-elsbetiae_contig5295:1810..6702- (Laminarionema elsbetiae ELsaHSoW15)back to top |