prot_L-elsbetiae_contig5284.13422.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5284.13422.1
Unique Nameprot_L-elsbetiae_contig5284.13422.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length897
Homology
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BLAST of mRNA_L-elsbetiae_contig5284.13422.1 vs. uniprot
Match: D7FU81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU81_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 2.180e-65
Identity = 114/154 (74.03%), Postives = 128/154 (83.12%), Query Frame = 0 
Query:  672 PLVKVWVCKHVRKGLAEPVNRAGECQICRNASRKTKAGITMCRHVREGEARAYGRGRTNSKCPPDYGRGHCRECTLRRYPILKAKLPRPRLWPSCAMPKCRRRHHAWGMCAPCLTAFKEKHPKSKPQQQGRRKSGKPSFRYTGADAEFTDSSDD 825
            P VK+WVCKHVRKGLAEPVN++GEC  CRNAS KT+AGI MC+HVREGEARAYGRG      P DYG+GHCREC ++RYP+ K K+PRPRLWPSC MP CRRRHHAWGMCAPCL  FK KHPK  PQ Q +RKSG+P+ +YTGADAE TDSSDD
Sbjct:   54 PPVKIWVCKHVRKGLAEPVNKSGECAACRNASIKTRAGIRMCKHVREGEARAYGRG------PGDYGKGHCRECFMKRYPVKKVKVPRPRLWPSCTMPACRRRHHAWGMCAPCLAEFKAKHPKCNPQAQ-KRKSGRPAHKYTGADAELTDSSDD 200
[Close]
BLAST of mRNA_L-elsbetiae_contig5284.13422.1 vs. uniprot
Match: D7FU82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU82_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.220e-50
Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 0 
Query:  514 VGASAAVGSGVENPELKLAGVVTFQNKSGITYQGRVVAIDPRPRPDAPRGIVRVKYDDWPYDKYDEDAKMEVVTPFGWVPTPIGRAGRRASKRPVTFTPSTE 615
            VGASA+VGSGVENP+LKLAG+VTFQNKSGITY+GRVVAIDPRP P +PRG+VRVKYDDWPYDKYDED   E+VTPFGWVPTP+GRAGRRASK P TFTPST+
Sbjct:   50 VGASASVGSGVENPQLKLAGLVTFQNKSGITYKGRVVAIDPRPFPGSPRGVVRVKYDDWPYDKYDEDVSTEMVTPFGWVPTPVGRAGRRASKPPPTFTPSTD 151
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5284.13422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU81_ECTSI2.180e-6574.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU82_ECTSI3.220e-5084.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5284contigL-elsbetiae_contig5284:1219..12583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5284.13422.1mRNA_L-elsbetiae_contig5284.13422.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5284 1219..12583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5284.13422.1 ID=prot_L-elsbetiae_contig5284.13422.1|Name=mRNA_L-elsbetiae_contig5284.13422.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=897bp
RTSGRPTRALDPPPPPPPGASNRRCGSMDADSSNGSAAAREEDMDIIEID
SGVDSSGDDGDEDADSDVRVDSDANDNSSAEGERGFPCACLLSTCYLKKP
KLFHNNDELNRHLQRCMQRADRTQVEAEAASGGSAAGSSSGSSSNSGATP
PASSLRQSQRNTTVPLRVSLDYETCPSISSRGSGGGGGGSGSGGGGGSSS
GRSNTASRSSSSASSATDDVDGGSSGGGGRGNGRGSGKGSGSGGGSGSGS
GSGSGSGSGSGKANGDSGKANGDSGKANGDSGKANGDSGKANSGRANGGR
ANGGNLSWRDVAAAAEDDDSAGAAADSGRLQWIASMSAENGEGSGMVRRR
SRGAGGGAGKSRPLSSARGSGRKNDRRASTPTPAPTPASRGRRGGGGSGA
GGDTAVAVSAEAAVDGAAASQGSRGGSAAGAAGAAGAGGSATTVATAPAA
VAAAGAGLAASWRGTLGSWGASGGFTCPVNPVAGWGIPGCGKENRARDNK
CSSCQRILRADWLVGASAAVGSGVENPELKLAGVVTFQNKSGITYQGRVV
AIDPRPRPDAPRGIVRVKYDDWPYDKYDEDAKMEVVTPFGWVPTPIGRAG
RRASKRPVTFTPSTENQYLRKPPAPVEIIAVDEGAAGGGEGKEGGGPPGS
SGEEEDESSEEEESSEEEEVLPLVKVWVCKHVRKGLAEPVNRAGECQICR
NASRKTKAGITMCRHVREGEARAYGRGRTNSKCPPDYGRGHCRECTLRRY
PILKAKLPRPRLWPSCAMPKCRRRHHAWGMCAPCLTAFKEKHPKSKPQQQ
GRRKSGKPSFRYTGADAEFTDSSDDDGGGGGGSDTSAEARSSGTSRSAAG
GAGGRGEGRGRGCKGQGQGQSLGKGKRAGGDTSRKGKRARVVDVAEG
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