prot_L-elsbetiae_contig528.13414.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig528.13414.1
Unique Nameprot_L-elsbetiae_contig528.13414.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length510
Homology
BLAST of mRNA_L-elsbetiae_contig528.13414.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 3.370e-96
Identity = 237/513 (46.20%), Postives = 294/513 (57.31%), Query Frame = 0
Query:    5 DNKPRTRAQVLADLAAVARLRLRVFFTPGVFRQLAETALLAEGRAFERHELARTLALEDGEPWRLAEAAAARRGVESAGGVVPADVDRLRATAAGAARLSRALAQGEDLAAAECRSFLKTSAGRAELRATTAAAREQHRRHLQLKPATAVDSSRSGAIPGLGTIKRALSAINSLARDELRRAFLLCEADGVPGEISRAEAIHILAYAGIPQATAATAGRVRVPRQGKEDKAKHAEEQRYRQESGRGWRQRP---RWPQGRW-SRRSKLXXXGERLRSRLL--------QAFSTLRRTGGSTXXXXXXXXXXXXXXXXXXSRARICPTSHEDADGG----GAVGLMAERPLTGMLVVRKPGD-LDGGGADRLSTGEDSQLQEDGKSLGKNTSSEGGEEEGLDSDQI-SDGGFSLDMDVLDDVTNDEGFELGEMEIILEVARARQTRLARAASLARLLTRRALPTYFTDARDARMLLMSRARSTGRDRAMHKFENLLIIGKHDDSGSVIAARPTH 499
            + +PRT+AQ+ ADLA +A+L+L++FFTPG FR+LA+ ALLAEGRAFERHELAR +ALEDGEPWRLAEAA  +RG+ESAGG  PADVDRLRA   GAA+L RALA GE                                            ++RS  +P     +R  SA+N+LARDELRRAF LCEADGVPGEISRAEA H+L++AGIPQ T A  GRVRVP     +++KH+  Q    ++ +  R+R    RWP   W  RR+K     +    R +         A S   + GG                      AR+CPT+ +D D      G + +  E P +        GD LDG G D    GE                    E++G +SD   SDG FS+DMD++DDVTNDEGFELGEMEI+L   +ARQT  A+AASL RLL RRALP   TD RDARMLLMSRARS GRD+AMH+FENLL +    ++G + AA   H
Sbjct: 2495 ERRPRTKAQIRADLATIAKLKLKMFFTPGAFRKLAKQALLAEGRAFERHELARAIALEDGEPWRLAEAAETKRGIESAGGATPADVDRLRAMTMGAAKLGRALALGE--------------------------------------------AARSSGLP---LQRRIASAMNNLARDELRRAFALCEADGVPGEISRAEAAHVLSFAGIPQTTLAATGRVRVPLL---EESKHSGGQP--SQTPKSQRRRXXXRRWP---WRGRRAKGPSRSQPPPGRQVTPPPRHPRNAVSRFLKIGGGAGPGGAKKQGNTGTG----GTARVCPTNEDDGDDNAVVVGPIVVGPESPPSQAGEKEDRGDDLDGEGGDACIGGE--------------------EDDGRESDDHGSDGQFSVDMDMVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPISLTDTRDARMLLMSRARSAGRDKAMHQFENLLTV----ETGDLFAAAAHH 2924          
BLAST of mRNA_L-elsbetiae_contig528.13414.1 vs. uniprot
Match: A0A6H5L3X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X6_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 8.820e-35
Identity = 93/191 (48.69%), Postives = 115/191 (60.21%), Query Frame = 0
Query:  314 ARICPTSHEDADGGGA----VGLMAERPLTGMLVVRKPGDLDGGGADRLSTGEDSQLQEDGKSLGKNTSSEGGEEEGLDSDQI-SDGGFSLDMDVLDDVTNDEGFELGEMEIILEVARARQTRLARAASLARLLTRRALPTYFTDARDARMLLMSRARSTGRDRAMHKFENLLIIGKHDDSGSVIAARPTH 499
            AR+CPT+ +D D        + +  E P +      +  DLDG G D    GE                    E++G +SD   SDG FS+DMD++DDVTNDEGFELGEMEI+L   +ARQT  A+AASL RLL RRALPT FTD RDA MLLMSRARS GR++AM KFENLL +    ++G + AA   H
Sbjct:   79 ARVCPTNEDDDDDNAIAVSPIVVGPESPPSQAGEKDRGDDLDGEGGDACIGGE--------------------EDDGRESDDHGSDGQFSVDMDIVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPTSFTDTRDAHMLLMSRARSAGREKAMRKFENLLTV----ETGDLFAAATHH 245          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig528.13414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G286_ECTSI3.370e-9646.20Centrin-1, putative n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5L3X6_9PHAE8.820e-3548.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig528contigL-elsbetiae_contig528:533..5618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig528.13414.1mRNA_L-elsbetiae_contig528.13414.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig528 482..5972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig528.13414.1 ID=prot_L-elsbetiae_contig528.13414.1|Name=mRNA_L-elsbetiae_contig528.13414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=510bp
MPASDNKPRTRAQVLADLAAVARLRLRVFFTPGVFRQLAETALLAEGRAF
ERHELARTLALEDGEPWRLAEAAAARRGVESAGGVVPADVDRLRATAAGA
ARLSRALAQGEDLAAAECRSFLKTSAGRAELRATTAAAREQHRRHLQLKP
ATAVDSSRSGAIPGLGTIKRALSAINSLARDELRRAFLLCEADGVPGEIS
RAEAIHILAYAGIPQATAATAGRVRVPRQGKEDKAKHAEEQRYRQESGRG
WRQRPRWPQGRWSRRSKLPEGGERLRSRLLQAFSTLRRTGGSTGGGRGAN
KGDAGSRSSSRSRARICPTSHEDADGGGAVGLMAERPLTGMLVVRKPGDL
DGGGADRLSTGEDSQLQEDGKSLGKNTSSEGGEEEGLDSDQISDGGFSLD
MDVLDDVTNDEGFELGEMEIILEVARARQTRLARAASLARLLTRRALPTY
FTDARDARMLLMSRARSTGRDRAMHKFENLLIIGKHDDSGSVIAARPTHI
SVNPSPIGT*
back to top