mRNA_L-elsbetiae_contig528.13414.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig528.13414.1
Unique NamemRNA_L-elsbetiae_contig528.13414.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig528.13414.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 4.980e-96
Identity = 244/542 (45.02%), Postives = 307/542 (56.64%), Query Frame = 1 
Query:    1 RVGIGDLASSLRQPTPEMPAS--------DNKPRTRAQVLADLAAVARLRLRVFFTPGVFRQLAETALLAEGRAFERHELARTLALEDGEPWRLAEAAAARRGVESAGGVVPADVDRLRATAAGAARLSRALAQGEDLAAAECRSFLKTSAGRAELRATTAAAREQHRRHLQLKPATAVDSSRSGAIPGLGTIKRALSAINSLARDELRRAFLLCEADGVPGEISRAEAIHILAYAGIPQATAATAGRVRVPRQGKEDKAKHAEEQRYRQESGRGWRQRP---RWPQGRW-SRRSKLXXXGERLRSRLL--------QAFSTLRRTGGSTXXXXXXXXXXXXXXXXXXSRARICPTSHEDADGG----GAVGLMAERPLTGMLVVRKPGD-LDGGGADRLSTGEDSQLQEDGKSLGKNTSSEGGEEEGLDSDQI-SDGGFSLDMDVLDDVTNDEGFELGEMEIILEVARARQTRLARAASLARLLTRRALPTYFTDARDARMLLMSRARSTGRDRAMHKFENLLIIGKHDDSGSVIAARPTH 1548
            RV + D+ +SL +P+    A+        + +PRT+AQ+ ADLA +A+L+L++FFTPG FR+LA+ ALLAEGRAFERHELAR +ALEDGEPWRLAEAA  +RG+ESAGG  PADVDRLRA   GAA+L RALA GE                                            ++RS  +P     +R  SA+N+LARDELRRAF LCEADGVPGEISRAEA H+L++AGIPQ T A  GRVRVP     +++KH+  Q    ++ +  R+R    RWP   W  RR+K     +    R +         A S   + GG                      AR+CPT+ +D D      G + +  E P +        GD LDG G D    GE                    E++G +SD   SDG FS+DMD++DDVTNDEGFELGEMEI+L   +ARQT  A+AASL RLL RRALP   TD RDARMLLMSRARS GRD+AMH+FENLL +    ++G + AA   H
Sbjct: 2466 RVDLADVLASLHRPSSSALANSAGSAAEGERRPRTKAQIRADLATIAKLKLKMFFTPGAFRKLAKQALLAEGRAFERHELARAIALEDGEPWRLAEAAETKRGIESAGGATPADVDRLRAMTMGAAKLGRALALGE--------------------------------------------AARSSGLP---LQRRIASAMNNLARDELRRAFALCEADGVPGEISRAEAAHVLSFAGIPQTTLAATGRVRVPLL---EESKHSGGQP--SQTPKSQRRRXXXRRWP---WRGRRAKGPSRSQPPPGRQVTPPPRHPRNAVSRFLKIGGGAGPGGAKKQGNTGTG----GTARVCPTNEDDGDDNAVVVGPIVVGPESPPSQAGEKEDRGDDLDGEGGDACIGGE--------------------EDDGRESDDHGSDGQFSVDMDMVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPISLTDTRDARMLLMSRARSAGRDKAMHQFENLLTV----ETGDLFAAAAHH 2924
[Close]
BLAST of mRNA_L-elsbetiae_contig528.13414.1 vs. uniprot
Match: A0A6H5L3X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X6_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 5.020e-34
Identity = 93/191 (48.69%), Postives = 115/191 (60.21%), Query Frame = 1 
Query:  991 ARICPTSHEDADGGGA----VGLMAERPLTGMLVVRKPGDLDGGGADRLSTGEDSQLQEDGKSLGKNTSSEGGEEEGLDSDQI-SDGGFSLDMDVLDDVTNDEGFELGEMEIILEVARARQTRLARAASLARLLTRRALPTYFTDARDARMLLMSRARSTGRDRAMHKFENLLIIGKHDDSGSVIAARPTH 1548
            AR+CPT+ +D D        + +  E P +      +  DLDG G D    GE                    E++G +SD   SDG FS+DMD++DDVTNDEGFELGEMEI+L   +ARQT  A+AASL RLL RRALPT FTD RDA MLLMSRARS GR++AM KFENLL +    ++G + AA   H
Sbjct:   79 ARVCPTNEDDDDDNAIAVSPIVVGPESPPSQAGEKDRGDDLDGEGGDACIGGE--------------------EDDGRESDDHGSDGQFSVDMDIVDDVTNDEGFELGEMEILLAAVKARQTLAAKAASLGRLLARRALPTSFTDTRDAHMLLMSRARSAGREKAMRKFENLLTV----ETGDLFAAATHH 245
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig528.13414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G286_ECTSI4.980e-9645.02Centrin-1, putative n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5L3X6_9PHAE5.020e-3448.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig528contigL-elsbetiae_contig528:482..5972 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size1935
Cds size1530
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig528.13414.1prot_L-elsbetiae_contig528.13414.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig528 533..5618 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816545.2476206-UTR-L-elsbetiae_contig528:481..5321622816545.2476206-UTR-L-elsbetiae_contig528:481..532Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig528 482..532 +
1691683636.9408681-UTR-L-elsbetiae_contig528:481..5321691683636.9408681-UTR-L-elsbetiae_contig528:481..532Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig528 482..532 +
1622816545.359309-UTR-L-elsbetiae_contig528:5618..59721622816545.359309-UTR-L-elsbetiae_contig528:5618..5972Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig528 5619..5972 +
1691683637.0724926-UTR-L-elsbetiae_contig528:5618..59721691683637.0724926-UTR-L-elsbetiae_contig528:5618..5972Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig528 5619..5972 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816545.2603533-CDS-L-elsbetiae_contig528:532..6871622816545.2603533-CDS-L-elsbetiae_contig528:532..687Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 533..687 +
1691683636.9555073-CDS-L-elsbetiae_contig528:532..6871691683636.9555073-CDS-L-elsbetiae_contig528:532..687Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 533..687 +
1622816545.2710154-CDS-L-elsbetiae_contig528:1283..14611622816545.2710154-CDS-L-elsbetiae_contig528:1283..1461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 1284..1461 +
1691683636.9751554-CDS-L-elsbetiae_contig528:1283..14611691683636.9751554-CDS-L-elsbetiae_contig528:1283..1461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 1284..1461 +
1622816545.2836428-CDS-L-elsbetiae_contig528:1967..21401622816545.2836428-CDS-L-elsbetiae_contig528:1967..2140Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 1968..2140 +
1691683636.993771-CDS-L-elsbetiae_contig528:1967..21401691683636.993771-CDS-L-elsbetiae_contig528:1967..2140Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 1968..2140 +
1622816545.294348-CDS-L-elsbetiae_contig528:2554..26211622816545.294348-CDS-L-elsbetiae_contig528:2554..2621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 2555..2621 +
1691683637.005916-CDS-L-elsbetiae_contig528:2554..26211691683637.005916-CDS-L-elsbetiae_contig528:2554..2621Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 2555..2621 +
1622816545.3094087-CDS-L-elsbetiae_contig528:2959..30311622816545.3094087-CDS-L-elsbetiae_contig528:2959..3031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 2960..3031 +
1691683637.0193734-CDS-L-elsbetiae_contig528:2959..30311691683637.0193734-CDS-L-elsbetiae_contig528:2959..3031Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 2960..3031 +
1622816545.3232372-CDS-L-elsbetiae_contig528:3496..41021622816545.3232372-CDS-L-elsbetiae_contig528:3496..4102Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 3497..4102 +
1691683637.0319357-CDS-L-elsbetiae_contig528:3496..41021691683637.0319357-CDS-L-elsbetiae_contig528:3496..4102Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 3497..4102 +
1622816545.334299-CDS-L-elsbetiae_contig528:4716..48291622816545.334299-CDS-L-elsbetiae_contig528:4716..4829Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 4717..4829 +
1691683637.0439215-CDS-L-elsbetiae_contig528:4716..48291691683637.0439215-CDS-L-elsbetiae_contig528:4716..4829Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 4717..4829 +
1622816545.3467753-CDS-L-elsbetiae_contig528:5452..56181622816545.3467753-CDS-L-elsbetiae_contig528:5452..5618Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 5453..5618 +
1691683637.0612733-CDS-L-elsbetiae_contig528:5452..56181691683637.0612733-CDS-L-elsbetiae_contig528:5452..5618Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig528 5453..5618 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig528.13414.1

>prot_L-elsbetiae_contig528.13414.1 ID=prot_L-elsbetiae_contig528.13414.1|Name=mRNA_L-elsbetiae_contig528.13414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=510bp
MPASDNKPRTRAQVLADLAAVARLRLRVFFTPGVFRQLAETALLAEGRAF
ERHELARTLALEDGEPWRLAEAAAARRGVESAGGVVPADVDRLRATAAGA
ARLSRALAQGEDLAAAECRSFLKTSAGRAELRATTAAAREQHRRHLQLKP
ATAVDSSRSGAIPGLGTIKRALSAINSLARDELRRAFLLCEADGVPGEIS
RAEAIHILAYAGIPQATAATAGRVRVPRQGKEDKAKHAEEQRYRQESGRG
WRQRPRWPQGRWSRRSKLPEGGERLRSRLLQAFSTLRRTGGSTGGGRGAN
KGDAGSRSSSRSRARICPTSHEDADGGGAVGLMAERPLTGMLVVRKPGDL
DGGGADRLSTGEDSQLQEDGKSLGKNTSSEGGEEEGLDSDQISDGGFSLD
MDVLDDVTNDEGFELGEMEIILEVARARQTRLARAASLARLLTRRALPTY
FTDARDARMLLMSRARSTGRDRAMHKFENLLIIGKHDDSGSVIAARPTHI
SVNPSPIGT*
back to top

mRNA from alignment at L-elsbetiae_contig528:482..5972+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig528.13414.1 ID=mRNA_L-elsbetiae_contig528.13414.1|Name=mRNA_L-elsbetiae_contig528.13414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5491bp|location=Sequence derived from alignment at L-elsbetiae_contig528:482..5972+ (Laminarionema elsbetiae ELsaHSoW15)
AGGGTCGGCATTGGAGATTTGGCGTCGTCCCTACGTCAGCCCACGCCTGA
AATGCCGGCCAGCGACAACAAGCCACGGACAAGGGCTCAGGTACTGGCCG
ACCTTGCTGCAGTTGCCAGGCTCAGGCTCAGGGTGTTTTTCACGCCCGGT
GTCTTCCGGCAGCTCGCTGAGACGGCTCTTCTGGCGGAGGGGAGGGCTTT
CGAAAGGTGCGGTATTTTAACAAAACGTCTGCAAATGTCAACATTCTACA
TGTTTATATATTAAATCTGCGAAAAAGTCGTTCCAGGAGGACTGTTGTAA
GCACACTAACCCTCCCTCGCGATCCCAACCTACTCGCACAGAATCCGTGA
TCCGTTTATACTTACAATTCGTTGGTCGTTGGAATTTTATGGAGTTGTAC
TGAGTCTTCAAAAACCATAACAATAATACGCGTCGGAGGCGCTGATGAGA
GATGACGCACGATCCATGTCGTGATCATCAGCATTTCGATGACACGGCAA
AGCTCCCATCCGCCACGTCCCCGCCCCCTCGCTCGATGCACCAATGTGCG
CGCATCCGTACCCCGCTCAAAACACACCATTCACACCTATCATATCACGC
TCGCCCGCACAGCCCACCACACACGCACCCACACACACTCGCGCGCGCAC
TCGCGACCATCGCTCGACCGTTCAAACGACGGTTTCAACCTCGTGTCTGC
TTTTTCAGCGAGAAACACAGCAGAGCCTCAAATGTCTAAGCCTCGGAGCC
ACCCGCTCCTCCTTTCCTCAACAATACCCAACCCGCACCCACCACCAACA
AGGCACGAGCTCGCGCGAACCCTGGCCTTGGAGGACGGCGAGCCCTGGCG
CCTCGCCGAGGCGGCGGCGGCGAGAAGGGGCGTGGAATCGGCCGGGGGGG
TCGTCCCGGCCGACGTCGATCGCCTAAGGGCGACCGCTGCGGGTGCCGCG
AGGCTGTCCCGCGCGCTCGCTCAGGGAGAGGTGTGTTGCATGCGTGCCGC
TGCGCGAGTCGGATCATGTAGATTGTGCCACATATAAGTATCAGGCTGGC
CCACCTACACGCTTATGAGACATAATGCTTTCCCTCAGATATGTGCGGAT
CGTTCGGCGCGTGACGACCGGGACGGCTCACTCTCACGTCTGGCCCGTGT
GCGCTACGGGAGTGTCGTGTAAAAACAAAACGAGGAACAGCAGTAAGTGG
TGCACGCACACATCTATCCATCTCTCTCTCTCTCTCTCTCTCTCGCCCGC
GTGAGATGAAAGGGTTTCAAGATGCGCGGGTTGTGTTGTGCACAGGCGAA
ATCCCTCCTATGTAGCAGATGCATATAAACGACATCAAACCAAGCCACGC
AACAGCAGTAAGGGCGTCAATACGTAAAATGAACAACCGCATCGTATGTC
ACCTGCCCACCACGACCTAACCCGAGCCCCTCCGTTTGTCCCGCACCACG
ACCTAAATCCCTAAACAACCGTCGGTATCTTGGCAGGACCTAGCGGCCGC
GGAATGCCGCTCGTTCCTGAAGACGTCCGCCGGTCGCGCAGAGCTTAGGG
CAACGACGGCAGCCGCGAGAGAGCAGCACCGCCGTCATCTGCAGCTGAAG
CCGGCCACCGCGGTCGATTCTTCGCGGAGCGGCGCCATACCCGGTTTGGG
GACAATCAAGTAAGGGCCTGAATGCATCCATCCTAGCGGGGATGACGATG
CACGTACACATGTCTGGAGACGGGCCTGACTTCTTCTGCGACCACACACA
TAAAGCCTGCGTTGCAGACGATAGTGCCGCAGGCTACTGCGCTTTTACGC
GTCCGTTCGTCGGTAGCTGCTGTAGATATTTCTGGCCGGCGCTTTCTTCG
GTGAGGCTTTGGTCCTCTGACTCCTGTTGACACAGGACCGGCCATTCGAA
GCGCTATATATACGCTGATATGTTATGCATGGAAACCCGCCTTAACCAAC
GAACGACGGATTTGTTTCCCCCAGGCTTCACTCCCTGCAACTCATTCGCT
CCGCCGCCACCAACAGCCGCCTCGAAGGCTCGATTATTTCCCAAGCCTCT
TCCGTGCGTGTTCTCACCCGCAGGCGCGCGTTGTCGGCCATCAACAGTCT
AGCCAGGGATGAACTCCGGCGAGCTTTTCTTCTCTGCGAGGTGAACGCCA
AAACACGACTTTCGTAGCAAAAACTTCTTATTTAGCTCTTCGTCCGCGAA
TAAATATACTACCGTAGCCCGGGTTTGCCTCAGACCGGGTGCTCTTGCAA
CAGTAAAATAGAATGCACAAGGCTGCAAAATGACAGGTGGCCCGATAACC
GGAAGCTGCAGTGGCGCAAGTGTTTTTGTCGAACTACTGCTGCTGCCGAA
ACATCGTTTCTTCGTGTATGCACCCGGCGGAGGCAAGATCAGGAAGTTGG
GGGTGGGTGCCTACACAACAACCCGATCCTCCACAACGTATGGCACGTAT
TCTTCCCTTTGCCGCTTGTACGTTCAAGGCGGACGGAGTGCCCGGCGAGA
TAAGCAGGGCGGAAGCCATCCACATCCTGGCCTATGCGGGAATCCCTCAG
GTGTTGGCATTTGTACTGGAGCGTGAGAATAGACGGCGGGGACGGGCGGG
GAGGAGATCCTCGATTTCAAGGATTGGGCGTGCGCCGGATTCAGGCTAGG
TTTCGCGCAGCCTGAAAAGAAAGGGAGCGTGGGTGGGGTCGAGAAAACTG
CACTGGAAATCGCCGCTTGATGCAGAACCCCTCTCTACCCGTAAGACGAA
GAACCTACAGTATCGGTCATAGGTCGGAGCGTTTGAGAACAGAGTGGCCT
ACGGGAAAGTCGTGGCTGGCAGAACGAACGCGACTCGCGCGTCTTCGGTA
GTCCGCAGAGTCAACGGGCGCTGCCGCCACTGCAGTGGCGGGGCTTATCC
TACCACTGGCTTCTTACACCCCCCCCCCGCTCCCTCCGTCCCCTACTCAA
TCGATGATCGCGTCCGGCGCCTCCTCCAACACGGCGATGGACGGGCGGGT
CGGGTTGCACGACAGGCAACGGCAGCCACGGCAGGTCGGGTGCGGGTTCC
ACGGCAGGGCAAGGAGGACAAGGCAAAACACGCCGAAGAACAAAGATATC
GGCAAGAAAGCGGGCGGGGATGGCGCCAGAGGCCCCGGTGGCCGCAAGGG
CGGTGGTCCCGGCGAAGCAAGCTGCCGGAGGGGGGTGAAAGGCTCCGGTC
GAGACTACTGCAGGCGTTCTCCACTCTCCGTAGGACGGGTGGCAGCACCG
GCGGGGGGCGGGGGGCGAACAAGGGTGACGCCGGCAGCAGAAGCAGCAGC
AGGAGCAGAGCCAGGATATGTCCGACAAGCCACGAGGATGCCGATGGTGG
TGGCGCTGTTGGGTTGATGGCCGAGCGGCCACTCACGGGAATGTTGGTTG
TCCGCAAACCGGGCGACCTTGACGGCGGCGGTGCGGACAGGCTGAGCACC
GGGGAAGACAGCCAGCTGCAGGAGGACGGCAAGTCGCTCGGCAAGAACAC
CAGCAGCGAGGGCGGCGAAGAAGAGGGTCTCGACAGCGATCAAATTTCGG
ACGGAGGGTTCTCTCTGGACATGGATGTCCTGGACGACGTCACCAATGAC
GAGGGGTTTGAGCTCGGCGAGGTCTGTTCCCTTCTGGTTGAAAGTTAGAG
GGAAGAGACAGGGACAGAAAGAGACACAGACACACACATACTATAGGGGG
AGCGTACGCGCTCGCCAAAAGTGCAAGTGGTCATCAACCATCTTCTCCTG
CCCTGTAATGCCTAGCATGTTTGGTTTGTCTTGCGGTAGACTGGGAAAAC
AAAAATCCATGTTCCTACGACGATACTGCCCGCAAGCCACATTCGACGGT
GGGGTGTGCCGTACTTGCCTCCCTCCCTGGCCCGTGGTAAACAGGAGCAA
AATCTTGGTCACCGTGTGTGTGGTGGCATCACGCTTATGCGACCGTGTCG
ACCTGGCAAAGAGATCCGACTCTATATTTATGTAGTCTAGTGTGACTTCG
GCTTTCGACATGGAAAACAGTAAGCGGGCAGTTTGACCGACCGAGTACAA
CCATCTCCTTGGTGCTGCCCCAATCCAATCGCAACAGCAGTGGCTGCCCC
GACCCAACCCACCCTTCGAATAAAACACTGCCCGACTCGTGCCCCCCCCG
CCCAAACAAGCACTGGCGCAACCGATCCTATTCGTGGATCGTACTCGAAA
AAATTGCTTTCGGCTGCACCAAACACAAAAATCAGATGGAGATTATCCTG
GAGGTGGCAAGGGCTCGGCAGACACGTCTCGCGAGAGCGGCCAGCCTGGC
ACGGTTGCTGACCCGCAGGGCCCTACCGACCTATTTCACCGACGCAAGGT
AAGAAGCAGACCAAACAAACCTCCTCTCCGCACCCATGTGTCGCGATGGG
TCCACTCACAGAAGACGTGAAAAGCCTAGAAAATTGTACCGCATTCGTTC
CCTGTCCGGGGTGTTTGTTCACTGGAGGAGGAGGAGTGTGTTTCTTGCCA
AACGTTGTGCGCGGCCGAATGCGTGGGTACAAGCCACCTAGCCGTCCCGA
CAAGAAAATCTACACCCAGGAGGCTTCACGCTGCCCCGCACTCTATGTTG
GGTGCGCTGTTCACACCATTTAGTTTGGCCTTTGCAGTCGGAGGGGTTCT
AAAATTGTGCCTTTTGTACATAATTATGTCAACGCAGATACCTAGTCTAT
CTATACATAGGTCACAAGTCCTGCGAACATGCGGTTTCGCCGACAGCGAG
GGACAAAATGTATATGCGTGTACCTTTGAAGCCTCTCCGACTCGGCGTTT
TGGATTCCGAAATCTACGTGTTGTACTGCTGCTTGCCACGGACCCGTGCC
ATGAAGTGAGAATCCAACGTGCTCCTCTAGATCTGCATCAGCTGTTATCC
ATGGCGACAGGTGCCACCCCCTCCCCCGGGTGCTCTGTATGTACCCCCCC
GCTGCCTGCATGACTGCGCAGGGATGCGCGCATGCTTCTGATGAGCCGTG
CTCGCAGCACCGGAAGGGACAGGGCCATGCACAAGTTCGAGAACTTGTTG
ATTATAGGCAAACACGACGATAGTGGCAGCGTTATTGCAGCAAGGCCTAC
CCACATCAGCGTAAATCCTTCGCCAATAGGTACATAGTTGCCACCAGAGA
TGCATCAAGTAGTCTTCGGGGCTAGTGTCGCCATCGTCTCTCGGCGTCTT
CGCACTTCGGACTTCCCGTTCATCGTTAGCTCGAAGTATTGGCCTCCGCG
TTATACAAACAAGCGCAGCAGTATTCGCGAACTAAATCCCGTCAAAAGAA
TTGCTCGAGGTCCTCGGGTGCAGGGAATTGAATAATAGTATGTATCTAGA
GCAGGAGATAGACGAAACGAGTTGACACACGTGTTTAAATAGTTCGGACG
CCTGCCTGCAGGGCATCAGGAATACATACCCACAGAGTCATTATATTTTT
CTGGGGGGAAGCAAAGCAGCTGCGTGAGCGGCATTAGGCGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig528:482..5972+

>mRNA_L-elsbetiae_contig528.13414.1 ID=mRNA_L-elsbetiae_contig528.13414.1|Name=mRNA_L-elsbetiae_contig528.13414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3060bp|location=Sequence derived from alignment at L-elsbetiae_contig528:482..5972+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGGCCAGCGACAACAAGCCACGGACAAGGGCTCAGGTACTGGCCGA
CCTTGCTGCAGTTGCCAGGCTCAGGCTCAGGGTGTTTTTCACGCCCGGTG
TCTTCCGGCAGCTCGCTGAGACGGCTCTTCTGGCGGAGGGGAGGGCTTTC
GAAAGATGCCGGCCAGCGACAACAAGCCACGGACAAGGGCTCAGGTACTG
GCCGACCTTGCTGCAGTTGCCAGGCTCAGGCTCAGGGTGTTTTTCACGCC
CGGTGTCTTCCGGCAGCTCGCTGAGACGGCTCTTCTGGCGGAGGGGAGGG
CTTTCGAAAGGCACGAGCTCGCGCGAACCCTGGCCTTGGAGGACGGCGAG
CCCTGGCGCCTCGCCGAGGCGGCGGCGGCGAGAAGGGGCGTGGAATCGGC
CGGGGGGGTCGTCCCGGCCGACGTCGATCGCCTAAGGGCGACCGCTGCGG
GTGCCGCGAGGCTGTCCCGCGCGCTCGCTCAGGGAGAGGCACGAGCTCGC
GCGAACCCTGGCCTTGGAGGACGGCGAGCCCTGGCGCCTCGCCGAGGCGG
CGGCGGCGAGAAGGGGCGTGGAATCGGCCGGGGGGGTCGTCCCGGCCGAC
GTCGATCGCCTAAGGGCGACCGCTGCGGGTGCCGCGAGGCTGTCCCGCGC
GCTCGCTCAGGGAGAGGACCTAGCGGCCGCGGAATGCCGCTCGTTCCTGA
AGACGTCCGCCGGTCGCGCAGAGCTTAGGGCAACGACGGCAGCCGCGAGA
GAGCAGCACCGCCGTCATCTGCAGCTGAAGCCGGCCACCGCGGTCGATTC
TTCGCGGAGCGGCGCCATACCCGGTTTGGGGACAATCAAGACCTAGCGGC
CGCGGAATGCCGCTCGTTCCTGAAGACGTCCGCCGGTCGCGCAGAGCTTA
GGGCAACGACGGCAGCCGCGAGAGAGCAGCACCGCCGTCATCTGCAGCTG
AAGCCGGCCACCGCGGTCGATTCTTCGCGGAGCGGCGCCATACCCGGTTT
GGGGACAATCAAGCGCGCGTTGTCGGCCATCAACAGTCTAGCCAGGGATG
AACTCCGGCGAGCTTTTCTTCTCTGCGAGGCGCGCGTTGTCGGCCATCAA
CAGTCTAGCCAGGGATGAACTCCGGCGAGCTTTTCTTCTCTGCGAGGCGG
ACGGAGTGCCCGGCGAGATAAGCAGGGCGGAAGCCATCCACATCCTGGCC
TATGCGGGAATCCCTCAGGCGGACGGAGTGCCCGGCGAGATAAGCAGGGC
GGAAGCCATCCACATCCTGGCCTATGCGGGAATCCCTCAGGCAACGGCAG
CCACGGCAGGTCGGGTGCGGGTTCCACGGCAGGGCAAGGAGGACAAGGCA
AAACACGCCGAAGAACAAAGATATCGGCAAGAAAGCGGGCGGGGATGGCG
CCAGAGGCCCCGGTGGCCGCAAGGGCGGTGGTCCCGGCGAAGCAAGCTGC
CGGAGGGGGGTGAAAGGCTCCGGTCGAGACTACTGCAGGCGTTCTCCACT
CTCCGTAGGACGGGTGGCAGCACCGGCGGGGGGCGGGGGGCGAACAAGGG
TGACGCCGGCAGCAGAAGCAGCAGCAGGAGCAGAGCCAGGATATGTCCGA
CAAGCCACGAGGATGCCGATGGTGGTGGCGCTGTTGGGTTGATGGCCGAG
CGGCCACTCACGGGAATGTTGGTTGTCCGCAAACCGGGCGACCTTGACGG
CGGCGGTGCGGACAGGCTGAGCACCGGGGAAGACAGCCAGCTGCAGGAGG
ACGGCAAGTCGCTCGGCAAGAACACCAGCAGCGAGGGCGGCGAAGAAGAG
GGTCTCGACAGCGATCAAATTTCGGACGGAGGGTTCTCTCTGGACATGGA
TGTCCTGGACGACGTCACCAATGACGAGGGGTTTGAGCTCGGCGAGGCAA
CGGCAGCCACGGCAGGTCGGGTGCGGGTTCCACGGCAGGGCAAGGAGGAC
AAGGCAAAACACGCCGAAGAACAAAGATATCGGCAAGAAAGCGGGCGGGG
ATGGCGCCAGAGGCCCCGGTGGCCGCAAGGGCGGTGGTCCCGGCGAAGCA
AGCTGCCGGAGGGGGGTGAAAGGCTCCGGTCGAGACTACTGCAGGCGTTC
TCCACTCTCCGTAGGACGGGTGGCAGCACCGGCGGGGGGCGGGGGGCGAA
CAAGGGTGACGCCGGCAGCAGAAGCAGCAGCAGGAGCAGAGCCAGGATAT
GTCCGACAAGCCACGAGGATGCCGATGGTGGTGGCGCTGTTGGGTTGATG
GCCGAGCGGCCACTCACGGGAATGTTGGTTGTCCGCAAACCGGGCGACCT
TGACGGCGGCGGTGCGGACAGGCTGAGCACCGGGGAAGACAGCCAGCTGC
AGGAGGACGGCAAGTCGCTCGGCAAGAACACCAGCAGCGAGGGCGGCGAA
GAAGAGGGTCTCGACAGCGATCAAATTTCGGACGGAGGGTTCTCTCTGGA
CATGGATGTCCTGGACGACGTCACCAATGACGAGGGGTTTGAGCTCGGCG
AGATGGAGATTATCCTGGAGGTGGCAAGGGCTCGGCAGACACGTCTCGCG
AGAGCGGCCAGCCTGGCACGGTTGCTGACCCGCAGGGCCCTACCGACCTA
TTTCACCGACGCAAGATGGAGATTATCCTGGAGGTGGCAAGGGCTCGGCA
GACACGTCTCGCGAGAGCGGCCAGCCTGGCACGGTTGCTGACCCGCAGGG
CCCTACCGACCTATTTCACCGACGCAAGGGATGCGCGCATGCTTCTGATG
AGCCGTGCTCGCAGCACCGGAAGGGACAGGGCCATGCACAAGTTCGAGAA
CTTGTTGATTATAGGCAAACACGACGATAGTGGCAGCGTTATTGCAGCAA
GGCCTACCCACATCAGCGTAAATCCTTCGCCAATAGGTACATAGGGATGC
GCGCATGCTTCTGATGAGCCGTGCTCGCAGCACCGGAAGGGACAGGGCCA
TGCACAAGTTCGAGAACTTGTTGATTATAGGCAAACACGACGATAGTGGC
AGCGTTATTGCAGCAAGGCCTACCCACATCAGCGTAAATCCTTCGCCAAT
AGGTACATAG
back to top