prot_L-elsbetiae_contig5268.13395.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5268.13395.1
Unique Nameprot_L-elsbetiae_contig5268.13395.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length86
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5268.13395.1 vs. uniprot
Match: A0A6H5JH17_9PHAE (Clu domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH17_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 2.000e-6
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:   49 MQVRQLLAEIPQTCLYSAFRLVAVTPKGGGDDE 81
            MQVRQLL EIPQTCLYSAFRLVA+TP+  G +E
Sbjct:    1 MQVRQLLGEIPQTCLYSAFRLVALTPEPEGTEE 33
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5268.13395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH17_9PHAE2.000e-678.79Clu domain-containing protein n=2 Tax=Ectocarpus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5268contigL-elsbetiae_contig5268:11270..11527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5268.13395.1mRNA_L-elsbetiae_contig5268.13395.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5268 11270..11527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5268.13395.1 ID=prot_L-elsbetiae_contig5268.13395.1|Name=mRNA_L-elsbetiae_contig5268.13395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp
GGGQGGEEEEEEEMAVFITVHPPLIPTTTGAAAAPPLVLEPLAGMELVMQ
VRQLLAEIPQTCLYSAFRLVAVTPKGGGDDEKKGDG
back to top