prot_L-elsbetiae_contig5266.13392.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5266.13392.1
Unique Nameprot_L-elsbetiae_contig5266.13392.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length136
Homology
BLAST of mRNA_L-elsbetiae_contig5266.13392.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 4.380e-27
Identity = 71/144 (49.31%), Postives = 76/144 (52.78%), Query Frame = 0
Query:    1 MEGTHPPYIAIAGDCSQSAYVLRPPXXXXXXXXXEEA---EVVGSWEREAAPLSYEIACAIEVPGTVGSLAVGYGPLLG-GGTVGGV-----PEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDGWAKQFVPNHDGN 135
            MEG  PPYIAIAGDCSQSAY+LRP                E  G+WE+EAAPL YEIACAIEVPGTVGSLAV YG LLG  GT+ G      P P                                 G DGWAK FVPN+DGN
Sbjct: 1061 MEGKQPPYIAIAGDCSQSAYILRPAPAASGSAGTAAGGGPETKGAWEQEAAPLGYEIACAIEVPGTVGSLAVSYGQLLGEDGTMEGFDTAEPPSPPHPPVASPEVFLEGAGRRRREEGVRPSPQPQRRGADGWAKLFVPNYDGN 1204          
BLAST of mRNA_L-elsbetiae_contig5266.13392.1 vs. uniprot
Match: A0A836CJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ47_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.720e-8
Identity = 38/75 (50.67%), Postives = 43/75 (57.33%), Query Frame = 0
Query:    7 PYIAIAGDCSQSAYVLRPPXXXXXXXXXEEAEVVGSWEREAAPLSYEIACAIEVPGTVGSLAVGYGPLLGGGTVG 81
            PYIA+AGDCSQ+AYVLRP               VG        L YE+ C I+  GTVGSLAV +GPL GGG  G
Sbjct:  307 PYIALAGDCSQAAYVLRPCG-------------VG--------LDYELVCRIDCEGTVGSLAVSHGPLCGGGDDG 360          
BLAST of mRNA_L-elsbetiae_contig5266.13392.1 vs. uniprot
Match: A0A7S4DAE7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAE7_HETAK)

HSP 1 Score: 55.1 bits (131), Expect = 4.060e-6
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    2 EGTHPPYIAIAGDCSQSAYVLRPPXXXXXXXXXEEAEVVGSWEREAAPLSYEIACAIEVPGTVGSLAVGY 71
            EG  PPYIA+AGDC+Q+AY+L P          ++++  G +  + A   YE+ C I   GTVGSLA G+
Sbjct:  451 EGKDPPYIAVAGDCAQAAYILAP------AARHDKSDSGGGYSIQKAA-DYEMLCMISCGGTVGSLAFGF 513          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5266.13392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJ55_9PHAE4.380e-2749.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJ47_9STRA2.720e-850.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DAE7_HETAK4.060e-642.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5266contigL-elsbetiae_contig5266:636..1590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5266.13392.1mRNA_L-elsbetiae_contig5266.13392.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5266 299..1590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5266.13392.1 ID=prot_L-elsbetiae_contig5266.13392.1|Name=mRNA_L-elsbetiae_contig5266.13392.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
MEGTHPPYIAIAGDCSQSAYVLRPPAAAAAAAKQEEAEVVGSWEREAAPL
SYEIACAIEVPGTVGSLAVGYGPLLGGGTVGGVPEPPVLQPPTVAAAAAA
ASRSVCFVPEEEGRRRRRRGGDGWAKQFVPNHDGNW
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