prot_L-elsbetiae_contig5253.13376.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5253.13376.1
Unique Name	prot_L-elsbetiae_contig5253.13376.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	147

Homology

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BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: D8LDB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB8_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 9.080e-54
Identity = 94/146 (64.38%), Postives = 107/146 (73.29%), Query Frame = 0

Query:    1 MCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDNLEGEK 146
            +CTSLEP++L+ ERELLDHYHAELSRGLEARFGKP           A  G               GS  +WYP  Q  DDYRVA+LDYMRCVV TLWKGLTPEKM++NRSSGPGMSLINRS +H+QWMIE+AT LLDELD+LE +K
Sbjct:  352 ICTSLEPSLLSRERELLDHYHAELSRGLEARFGKPS----------APEGGG-------------GSDGAWYPSGQFADDYRVAFLDYMRCVVSTLWKGLTPEKMDRNRSSGPGMSLINRSARHMQWMIEKATRLLDELDSLEEDK 474

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BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A6H5JKQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ9_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.020e-53
Identity = 95/146 (65.07%), Postives = 105/146 (71.92%), Query Frame = 0

Query:    1 MCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDNLEGEK 146
            +CTSLEP++L+ ERELLDHYHAELSRGLEARFGKPP         GA                       WYP  Q  DDYRVA+LDYMRCVV TLWKGLTPEKM++NRSSGPGMSLINRS +H+QWMIERAT LLDELD+LE EK
Sbjct:  470 ICTSLEPSLLSRERELLDHYHAELSRGLEARFGKPPAPEGGGDSDGA-----------------------WYPSGQFADDYRVAFLDYMRCVVSTLWKGLTPEKMDRNRSSGPGMSLINRSPRHMQWMIERATRLLDELDSLEKEK 592

[Close]

BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A7S2WTC9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WTC9_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.280e-5
Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 0

Query:   75 EQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDNLEG 144
            E  E    + +LDYMR ++  LW+ L+ E+ EKN++   G+SL+  SV  ++W++  A   +D +D+L G
Sbjct:  380 ESFESLASIIWLDYMRVILLGLWRRLSTEQQEKNKTK-IGISLVTSSVDQMKWILASALKNVDRVDSLLG 448

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LDB8_ECTSI	9.080e-54	64.38	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JKQ9_9PHAE	1.020e-53	65.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2WTC9_9STRA	3.280e-5	35.71	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..146

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5253	contig	L-elsbetiae_contig5253:8300..10195 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5253.13376.1	mRNA_L-elsbetiae_contig5253.13376.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5253 8007..11228 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5253.13376.1 ID=prot_L-elsbetiae_contig5253.13376.1|Name=mRNA_L-elsbetiae_contig5253.13376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp
MCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRPPPSPPLGAERG
RGGGGGGAGEGGAGEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGL
TPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDNLEGEK*