mRNA_L-elsbetiae_contig5253.13376.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: D8LDB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB8_ECTSI) HSP 1 Score: 258 bits (660), Expect = 2.240e-79 Identity = 141/234 (60.26%), Postives = 158/234 (67.52%), Query Frame = 2 Query: 53 GGRGRTLVHGDLKTWNVFFRKGAGGEAGEEEFTATA---------AAAATAEGRVKIIDWQ-------------WCGEGLAAADVAYVMCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDNLEGEK 688 G RGR+LVHGDLKTWNVFF+ G EAGE+ A A AA A G+VKIIDWQ WCGEGLAA D AYV+CTSLEP++L+ ERELLDHYHAELSRGLEARFGKP A G GS +WYP Q DDYRVA+LDYMRCVV TLWKGLTPEKM++NRSSGPGMSLINRS +H+QWMIE+AT LLDELD+LE +K Sbjct: 264 GKRGRSLVHGDLKTWNVFFKTGGWAEAGEQGEGAAARDGGGVDAQGPAAAAGGKVKIIDWQVWFVLEVGVVTNEWCGEGLAATDAAYVICTSLEPSLLSRERELLDHYHAELSRGLEARFGKPS----------APEGGG-------------GSDGAWYPSGQFADDYRVAFLDYMRCVVSTLWKGLTPEKMDRNRSSGPGMSLINRSARHMQWMIEKATRLLDELDSLEEDK 474
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A6H5JKQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ9_9PHAE) HSP 1 Score: 261 bits (668), Expect = 2.790e-79 Identity = 139/221 (62.90%), Postives = 152/221 (68.78%), Query Frame = 2 Query: 53 GGRGRTLVHGDLKTWNVFFRKGAGGEAGEEEFTATAAA---------AATAEGRVKIIDWQWCGEGLAAADVAYVMCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDNLEGEK 688 G RGR+LVHGDLKTWNVFF+ E G + A A AA A VKIIDWQWCGEGLAAAD AYV+CTSLEP++L+ ERELLDHYHAELSRGLEARFGKPP GA WYP Q DDYRVA+LDYMRCVV TLWKGLTPEKM++NRSSGPGMSLINRS +H+QWMIERAT LLDELD+LE EK Sbjct: 395 GKRGRSLVHGDLKTWNVFFKTAGWAEPGGQGEGAAARGDGGGDAKGPAAAARRNVKIIDWQWCGEGLAAADAAYVICTSLEPSLLSRERELLDHYHAELSRGLEARFGKPPAPEGGGDSDGA-----------------------WYPSGQFADDYRVAFLDYMRCVVSTLWKGLTPEKMDRNRSSGPGMSLINRSPRHMQWMIERATRLLDELDSLEKEK 592
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A7R9XU18_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9XU18_MICPS) HSP 1 Score: 85.9 bits (211), Expect = 7.960e-15 Identity = 63/207 (30.43%), Postives = 87/207 (42.03%), Query Frame = 2 Query: 65 RTLVHGDLKTWNVFFRKGAGGEAGEEEFTATAAAAATAEGRVK----IIDWQWCGEGLAAADVAYVMCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDN 673 +TLVHGDLK NV F A A+ AEG +IDWQW G G A D+ Y + TSL L EL++ YHAEL+R L AR + A + L +D V DY+R G+++ LTPE+M N + RS+ HL W++ +A LD +++ Sbjct: 197 QTLVHGDLKAANVIF-----------PIHAVDASDPAAEGDPDPDPVVIDWQWVGPGAVAHDLLYFLATSLSMDALTRVDELVEAYHAELTRRLRAR--------------------------------GHHAAADAFTATDLREDLDVHAADYLRYCAGSVFGELTPERMAHNAPK-QNYGIARRSMPHLTWLVRKAARALDAMES 359
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A7S3C5E1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C5E1_9VIRI) HSP 1 Score: 79.7 bits (195), Expect = 2.330e-13 Identity = 64/204 (31.37%), Postives = 85/204 (41.67%), Query Frame = 2 Query: 65 RTLVHGDLKTWNVFFRKGAGGEAGEEEFTATAAAAATAEGRVKIIDWQWCGEGLAAADVAYVMCTSLEPAVLA----NERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGL--TPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLL 658 +TLVHGD K+ N+FFR+G G A + + V ID QW G GLAA DVA+ + L+ L+ E LLDHYHA L L G P E A P E L+ Y A LD R V W + +P + KN S G + N+SV H W++ + ++L Sbjct: 123 KTLVHGDPKSANIFFRQGPGSAADDVQ--------------VGYIDMQWSGFGLAATDVAHHIVAGLDIECLSADGCKEEALLDHYHASLVAQLVELGGFP-----------------------------EAQAARLLPRETLQAQYEAAVLDMCRVVFAYQWARVKASPATLAKNAPS-MGRNSYNKSVDHACWLVRQCDNML 282
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A5J4XP26_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XP26_9CHLO) HSP 1 Score: 72.8 bits (177), Expect = 5.800e-11 Identity = 52/165 (31.52%), Postives = 76/165 (46.06%), Query Frame = 2 Query: 65 RTLVHGDLKTWNVFFRKGAGGEAGEEEFTATAAAAATAEGRVKIIDWQWCGEGLAAADVAYVMCTSLEPAVLAN-ERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGLTP 556 RT++HGD KT N+FF A E +A+A V D+QWCG GL DV Y++ TS++P VL + E ELL Y++ L L+ + +GS Y +Q Y++AYLDY+R ++G +W +TP Sbjct: 99 RTIIHGDFKTANLFFSPTA------EAASASAPQHGGEPAMVSACDFQWCGGGLGVTDVMYLLWTSVQPQVLFDQEEELLRCYYSSLMHQLQEQH------------------------------HIDGSI---YSFQQCGHHYQMAYLDYIRFLIGAMWGTVTP 224
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A7S2F1X9_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2F1X9_9CHLO) HSP 1 Score: 71.6 bits (174), Expect = 7.560e-11 Identity = 61/204 (29.90%), Postives = 80/204 (39.22%), Query Frame = 2 Query: 65 RTLVHGDLKTWNVFFRKGAGGEAGEEEFTATAAAAATAEGRVKIIDWQWCGEGLAAADVAYVMCTSLEPAVLA----NERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGL--TPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLL 658 + L+HGD K NVFFR G G V ID+QWCG GLAA DVA+ + +L L+ E LLDHYH L R+G L P + L Y A LD RCV W + +P + NR S G + N+SV H W++ +A ++L Sbjct: 75 KCLIHGDPKQGNVFFRDEDDGTVG-----------------VGFIDFQWCGFGLAATDVAHHIVAALRIECLSADGSKEEALLDHYHTCLMESF-VRYGAADNIDEARLLL---------------------------PRDVLSQQYESAVLDMCRCVFAYQWARVKASPTTLAANRKS-LGRNSYNKSVDHACWLVRQADNML 232
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A7S2WTC9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WTC9_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.450e-10 Identity = 54/204 (26.47%), Postives = 86/204 (42.16%), Query Frame = 2 Query: 71 LVHGDLKTWNVFFRKGAGGEAGEEEFTATAAAAATAEGRVKIIDWQWCGEGLAAADVAYVMCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDNLEG 682 +HGD K+WN+F+ A EEE + + +ID QWCG G D Y M TS+ + +++ H+ L+A P L R E E + +LDYMR ++ LW+ L+ E+ EKN++ G+SL+ SV ++W++ A +D +D+L G Sbjct: 277 FIHGDAKSWNLFY-------ANEEESVSRP---------LILIDMQWCGYGHPLQDFCYFMTTSVGAGSNTDLQQVWAHWLKIFREKLKAMLKNIQPSIANIDVLAYNRYVETIVCDNF---------------ESFESLASIIWLDYMRVILLGLWRRLSTEQQEKNKTK-IGISLVTSSVDQMKWILASALKNVDRVDSLLG 448
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A7S0IFV6_MICPS (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IFV6_MICPS) HSP 1 Score: 72.4 bits (176), Expect = 2.520e-10 Identity = 55/218 (25.23%), Postives = 90/218 (41.28%), Query Frame = 2 Query: 68 TLVHGDLKTWNVFFRKGAGGEAGEEEFTATAAAAATAEGRVKIIDWQWCGEGLAAADVAYVMCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLLDELDNLEGEK*S-PAILRRAL 718 T+VHGD K N+ A G +K+ID+QWCG G A D+AY CTS VL + + YH EL++ L AR G P + A + ++ L+ + + ++DY R +G +W +TP +++N ++ + RS HLQ + A+ L ++ S P+++ L Sbjct: 245 TVVHGDFKAANIIRD--------------------VASGAIKMIDFQWCGLGSPARDLAYYFCTSASEEVLVEKERFIKVYHDELTKALRAR-GSPEA----------------------------VAAADAFNLDTLKSFFVLHHIDYTRFTMGAMWGTVTPATLQQN-ANAHNQGMHKRSRWHLQRQMADASVTLTSYIEFHSKRASTPSLVSEVL 412
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A5D6YE31_9STRA (CHK domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE31_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.410e-10 Identity = 61/194 (31.44%), Postives = 82/194 (42.27%), Query Frame = 2 Query: 65 RTLVHGDLKTWNVFFRKGAGGEAGEEEFTATAAAAATAEGRVKIIDWQWCGEGLAAADVAYVMCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASW-YPVEQLEDDYRVAYLDYMRCVVGTLWKGLTPEKMEKNRSSGPGMSLINRSVQHLQWMIER 643 RT+VHGD K+ N+FF EA + A DWQWCG G+ A DVAY++ TS+ L+ + ELL L R RF LG G RAS YP + + Y +A L+Y R ++ W+G+TP + S L RSV H+ MIE+ Sbjct: 621 RTIVHGDFKSANLFF------EAASRDVVA--------------FDWQWCGVGVGALDVAYLLNTSVSIDALSADNELL------LLRWYYDRFAA---------LLG-------------------GRRASQKYPFDAFQRHYVLATLEYARVLISDFWRGMTPASCAA-KLSNTNCGLGYRSVPHVLRMIEK 759
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Match: A0A830I3N3_9CHLO (APH domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I3N3_9CHLO) HSP 1 Score: 71.6 bits (174), Expect = 4.530e-10 Identity = 61/204 (29.90%), Postives = 80/204 (39.22%), Query Frame = 2 Query: 65 RTLVHGDLKTWNVFFRKGAGGEAGEEEFTATAAAAATAEGRVKIIDWQWCGEGLAAADVAYVMCTSLEPAVLA----NERELLDHYHAELSRGLEARFGKPPPRXXXXXXLGAERGRXXXXXXXXXXXXXEGSRASWYPVEQLEDDYRVAYLDYMRCVVGTLWKGL--TPEKMEKNRSSGPGMSLINRSVQHLQWMIERATSLL 658 + L+HGD K NVFFR G G V ID+QWCG GLAA DVA+ + +L L+ E LLDHYH L R+G L P + L Y A LD RCV W + +P + NR S G + N+SV H W++ +A ++L Sbjct: 593 KCLIHGDPKQGNVFFRDEDDGTVG-----------------VGFIDFQWCGFGLAATDVAHHIVAALRIECLSADGSKEEALLDHYHTCLMESF-VRYGAADNIDEARLLL---------------------------PRDVLSQQYESAVLDMCRCVFAYQWARVKASPTTLAANRKS-LGRNSYNKSVDHACWLVRQADNML 750 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5253.13376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5253.13376.1 >prot_L-elsbetiae_contig5253.13376.1 ID=prot_L-elsbetiae_contig5253.13376.1|Name=mRNA_L-elsbetiae_contig5253.13376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp MCTSLEPAVLANERELLDHYHAELSRGLEARFGKPPPRPPPSPPLGAERGback to top mRNA from alignment at L-elsbetiae_contig5253:8007..11228- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5253.13376.1 ID=mRNA_L-elsbetiae_contig5253.13376.1|Name=mRNA_L-elsbetiae_contig5253.13376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3222bp|location=Sequence derived from alignment at L-elsbetiae_contig5253:8007..11228- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5253:8007..11228- >mRNA_L-elsbetiae_contig5253.13376.1 ID=mRNA_L-elsbetiae_contig5253.13376.1|Name=mRNA_L-elsbetiae_contig5253.13376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig5253:8007..11228- (Laminarionema elsbetiae ELsaHSoW15)back to top |