prot_L-elsbetiae_contig5249.13367.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5249.13367.1
Unique Nameprot_L-elsbetiae_contig5249.13367.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1453
Homology
BLAST of mRNA_L-elsbetiae_contig5249.13367.1 vs. uniprot
Match: D8LKB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB6_ECTSI)

HSP 1 Score: 1382 bits (3578), Expect = 0.000e+0
Identity = 891/1449 (61.49%), Postives = 989/1449 (68.25%), Query Frame = 0
Query:    1 QVLAFLVNGVKTRDPTTLSNVATALCRCTYEARNHESLVTEFNTAQALCYIMQRQTANLKIAGAKGMLNMCGLSSNLPALAAKLDVYMLTLCSAMEDLARNETEAV--KLNLKRPGNLAYLMSASVNLADLQSAHAQLVKQKDIVTVLCQLSSYPKLVENVSRGHPVSESSVTSWLAVEADSASPDGRLACLSAIEHLIRNQEDVDTPLLQAGLMGTLHAILDEPAAA--KAAEQAKEAALQDRAAAASSASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTA-GKKVVEPPSNPNXXXXXXXXXXXXL--LNVKKIMAISQHKKKTREHLMRSSPDILDRILAVVTKTCFSLTLRGRNRPRLVQHGLPALCGKVMKARYRLFIKFMAAACIFSLAQSAELCPDIAESGAADLALEDLDNGGRPGQAGQEESEFLLAQLAVVAQVAVEPRFCRRLASPETVDLLVVLALGTTPKNKSEY-RGAEEANGWK-GAGXXXXXXXXXXXXXXRLGNGGDHADSGGS--GCESQDIATKLAPAA------KRYSGERVNVATPYVGALRYCVVTIVERLGSILDEGGEFERTSSTLEMTSIVEKLVHLVCSVVLTSGPDEALMCRCARVVADWSSEPRFAKELGTKEAAGRSLAALMRSVSPKTKAGNYVSVALCNVAAASYCKMQPLSASDDDSAATAASATGASGKAAAKVGDGGAAPGRNAVKGTNQRQLNESSSSGSTSRISRKSDASDHH--NRDSSELSVNRTQSQSSLSGDDSPGAGGDADGGDQHWLMTTDILRDIIHGCLASASADVKSNLIKAMNNLMVSETRRAALVEGNEMSSLFELVHGYTPEVRELVARMLWNLTCERGFHSALLEADVTYTLLELLGSSTTQGAKKIPKQT------NSTPLAGXXXXXXXXXXXXXXSATTASLMGSTPSVGAIHAHDGAGSTVSGERSSIPREDGGGGESAQDGSNGTGTNTNGGGAVGGGLGTXGAVXXXXXXXXSGSHTEDXXXXXXXX-IGSSTESGISGVGLTSPEVAGTGHTPTLEVRRNVLGAVMNLTSFSISDPRLDPKAVMSLLTLIMREYPNESLNEDTAAHLWVTWQAVVLQLSFVEKYRPLIVYHGDGQVFSHLKMTNDPMSGKSSVMSMSHDRAYKRLIMGTMVNISCEPSLYEELEGQVVQVLREFLSEYEHEASGGGHSTGGILGGSRGG------------VGMLGDSGNDGSDADGRGMDEDGVAGXXXXXXXXXXXDTSSRGRDWVRHELCGKLVSNLFSSKTLRERLSKKPVAGILVGLLCGPPIRCNNGVTSSADSGSTTPASATWSSKSXXXXXXTQPGKRATSASSERRAHTNRRHPRKGSKQEGEPPLPRAPLPEGCGEPRPLLYGGGDEAAAIVSRFVCEMSILYSAEGGFELPQRTFGALVKIAHYYN 1411
            +VLAFLVNGVKTRDP TLSNVATALCRCTYEARNHE LVTEFN AQALCYIMQR T NLKI GAKGMLNMCGLSS LP+LAAKLDVYMLTLCSAMEDLARNE+EAV  KLNLKRPGNLAYL SASVNLADL+SAHAQLVKQKDIVTVLC LS  PKLVENVSR HPVSESSVTSWLA+EADSASPDGRLACLSAIEHLIRNQE+VDTPLL+AGLMGTLHAILDEP AA  KA EQA+EA + +    AS  S+                                 +A GK   E PS+P             +  L+ KKI+A++Q  KK RE L+RSSPD+LDRILAVVTKTCFS+TLRGRNRPRLVQHGLPALCGKVMK      IKFMAAACIFSLAQSA+LC DIAESGAADLALEDL NGG+PGQ GQEESEFLLAQLA+VAQVAVEPRFCRR+AS + +DLL+ LALG  P  K+E+ R   +A G   G+G                G G    D GG   G  S  I +     +      KR+SGERV VATPYVGALRYCVV IVER+G+IL+  GE+ R SS  EMTS+V+KLV+LVCS VLTSGPDEALM RCARV+ADWSSE +FAKE+G KEAAG+SLA LMRSVSPKTK  +YVSVALCNVAAA+ C+ Q  S  +D  AAT   A+    KAA   G GG        K TN       S  GS+++  R  +  ++H  + + S  +V+ T     +  ++   A GD   GD+ WL  T+ILRD I GCLASA+ADVKSNLIKAMNNLMVS+ RRA LV G+EM +LFELVHGYTPEVRELVARMLWNLTCE  FH ALLEA VT TLLELLGSS+   AKK  KQ       ++   +      XXXXXXXX SAT AS+ G T S GA    DG    VSG  +          ESAQ                      X   XXXXXXXX   HT D           SST   ++   L + E    G  P+LEVRRNVLGAVMNLTS SISDPRLDP AVMSLLTLIM E PNES NED  A LWVTWQAVVL+LSFVEKYR LIVYHGDGQ+FSHLK+TNDP+SGKSSVMSM+HDRAYKRLIMGTMVNISCE SLYEELEGQV QVLREFLSEYEHEASGG HSTGG                    +G+    G + +D+D RG DEDG +G XXXXXXXXXX   SRGRDWVRHELC KLVSNLFSSKTLRERLSKKP+AGILVGLLCGPP R NN  ++S  S S                                                            GCGEPRPLLYGGG+EAAAI SRF+CE+ ILYS EGGF+LPQRTF ALVKIAHYYN
Sbjct:  192 EVLAFLVNGVKTRDPITLSNVATALCRCTYEARNHERLVTEFNAAQALCYIMQRHTTNLKIIGAKGMLNMCGLSSTLPSLAAKLDVYMLTLCSAMEDLARNESEAVQVKLNLKRPGNLAYLASASVNLADLKSAHAQLVKQKDIVTVLCLLSEQPKLVENVSRAHPVSESSVTSWLALEADSASPDGRLACLSAIEHLIRNQEEVDTPLLRAGLMGTLHAILDEPIAAAEKATEQAQEAGILE----ASEPSLLPSASGSAIAAAGSATTRGSVVTPPIASSSDSTSAIGKSGAERPSSPRSGVAVTGGGGRGVEVLDAKKIVAMTQTSKKNRERLLRSSPDVLDRILAVVTKTCFSMTLRGRNRPRLVQHGLPALCGKVMKLTKDENIKFMAAACIFSLAQSADLCSDIAESGAADLALEDLANGGQPGQNGQEESEFLLAQLAIVAQVAVEPRFCRRMASAKMIDLLMTLALGNAPDKKAEHGRPRPDAEGTNDGSGRSGGSGAPNTSGREGSGXGNTVIDGGGGKGGVRSDGIGSPRPQRSGWPMKGKRFSGERVKVATPYVGALRYCVVAIVERVGTILNADGEYGRASSPSEMTSMVKKLVYLVCSAVLTSGPDEALMARCARVMADWSSEAKFAKEMGVKEAAGKSLAVLMRSVSPKTK--SYVSVALCNVAAATQCETQLPSPRNDGGAATPELAS-TQDKAAVNEGGGGGHG-----KDTNDHGSQRQSDGGSSAQSLRSREPDNNHMVSHEGSGAAVSET-----IDNNEGSVAAGD---GDRFWLTNTNILRDTIAGCLASATADVKSNLIKAMNNLMVSKERRATLVAGDEMPALFELVHGYTPEVRELVARMLWNLTCEHDFHPALLEAGVTCTLLELLGSSSINNAKKANKQQXXXXXDSNAAASIRGVGNXXXXXXXXVSATDASVSG-TQSSGAALLDDGGVGAVSGGET----------ESAQXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXHTADAVGQGATRRSSSSTGERVASARLEAVEAVSMGRKPSLEVRRNVLGAVMNLTSLSISDPRLDPSAVMSLLTLIMHEDPNESPNEDMVADLWVTWQAVVLRLSFVEKYRALIVYHGDGQIFSHLKLTNDPLSGKSSVMSMAHDRAYKRLIMGTMVNISCETSLYEELEGQV-QVLREFLSEYEHEASGGAHSTGGTXXXXXXXXXXXXXXXXXXXMGLADSDGLESADSDERGFDEDG-SGMXXXXXXXXXXXXXSRGRDWVRHELCAKLVSNLFSSKTLRERLSKKPIAGILVGLLCGPPTRWNNRTSNSGGSTS------------------------------------------------------------GCGEPRPLLYGGGEEAAAITSRFLCELCILYSTEGGFDLPQRTFDALVKIAHYYN 1542          
BLAST of mRNA_L-elsbetiae_contig5249.13367.1 vs. uniprot
Match: A0A6H5JX20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX20_9PHAE)

HSP 1 Score: 499 bits (1284), Expect = 1.230e-148
Identity = 360/692 (52.02%), Postives = 393/692 (56.79%), Query Frame = 0
Query:  760 DSPGAGGDADGGDQHWLMTTDILRDIIHGCLASASADVKSNLIKAMNNLMVSETRRAALVEGNEMSSLFELVHGYTPEVRELVARMLWNLTCERGFHSALLEADVTYTLLELLGSSTTQGAKKIPKQT-----NSTPLAGXXXXXXXXXXXXXXSATTASLMGSTPSVGAIHAHDGAGSTVSGERSSIPREDGGGGESAQDGSNG-TGTNTNGGGAVGGGLGTXGAVXXXXXXXXSGSHTEDXXXXXXXXIGSS-TESGISGVGLTSPEVAGTGHTPTLEVRRNVLGAVMNLTSFSISDPRLDPKAVMSLLTLIMREYPNESLNEDTAAHLWVTWQAVVLQLSFVEKYRPLIVYHGDGQVFSHLKMTNDPMSGKSSVMSMSHDRAYKRLIMGTMVNISCEPSLYEELEGQVVQVLREFLSEYEHEASGGGHSTGGILGGSRG------------GVGMLGDSGNDGSDADGRGMDEDGVAGXXXXXXXXXXXDTSSRGRDWVRHELCGKLVSNLFSSKTLRERLSKKPVAGILVGLLCGPPIRCNNGVTSSADSGSTTPASATWSSKSXXXXXXTQPGKRATSASSERRAHTNRRHPRKG---------------------SKQEGEPPLPRAPLPEGCGEPRPLLYGGGDEAAAIVSRFVCEMSILYSAEGGFELPQRTFGALVKIAHYYN 1411
            DS G    A  GD+ WL  T+ILRD I GCLASA+ADVKSNLIKAMNNLMVSE RRA LV G+E+ +LFELVHGYTPEVRELVARMLWNLTCE  FHSALLEA VT TLLELLGSS                 +S   A               SAT AS+ G+    GA    DG    VSG  +          ESAQDGS+G  G  T+G G VG G           XXXX   HT D          SS T   ++     + E    G  P+LEVRRNVLGAVMNLTS SISDPRLDP AVMSLLT IM E PNE                                  G+        +TNDP+SGKSSVMSM+HDRAYKRLIMGTMVNISCE SLYEELEGQV QVLREFLSEYEHEASGG HSTGG LGG               G+G+    G + +D+D RG+DEDG                   GRDWVRHELC KLVSNLFSSKTLRERLSKKP+AGILVGLLCGPP R NN  ++                  XXXXXX                                               SK EGEPP P  PLPEGCGEPRPLLYGGG+EAAAI SRF+CE+ ILYS EGGF+LPQRTF ALVKIAHYYN
Sbjct:   16 DSNGGSEAAGDGDRFWLTNTNILRDTIAGCLASATADVKSNLIKAMNNLMVSEERRAKLVAGDELPALFELVHGYTPEVRELVARMLWNLTCEHDFHSALLEAGVTCTLLELLGSSXXXXXXXXXXXXXXXXXDSNAAASIRGVGNGSGGA---SATDASVSGTQS--GAALLDDGGVRPVSGGET----------ESAQDGSSGDVGPATSGAGGVGSG------PEASTXXXXXXXHTADAVGEGSTRRSSSGTGERVASARSEAVEAVSIGRKPSLEVRRNVLGAVMNLTSLSISDPRLDPSAVMSLLTFIMHEDPNE---------------------------------RGE--------LTNDPLSGKSSVMSMAHDRAYKRLIMGTMVNISCETSLYEELEGQV-QVLREFLSEYEHEASGGAHSTGGTLGGXXXXXXXXXXXXXXXGLGLADSDGLESADSDERGLDEDGG------------------GRDWVRHELCAKLVSNLFSSKTLRERLSKKPIAGILVGLLCGPPTRWNNRTSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKCEGEPPXPNPPLPEGCGEPRPLLYGGGEEAAAITSRFLCELCILYSTEGGFDLPQRTFDALVKIAHYYN 626          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5249.13367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKB6_ECTSI0.000e+061.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JX20_9PHAE1.230e-14852.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 772..883
e-value: 5.0E-7
score: 31.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 127..874
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5249contigL-elsbetiae_contig5249:108..12892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5249.13367.1mRNA_L-elsbetiae_contig5249.13367.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5249 108..12892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5249.13367.1 ID=prot_L-elsbetiae_contig5249.13367.1|Name=mRNA_L-elsbetiae_contig5249.13367.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1453bp
QVLAFLVNGVKTRDPTTLSNVATALCRCTYEARNHESLVTEFNTAQALCY
IMQRQTANLKIAGAKGMLNMCGLSSNLPALAAKLDVYMLTLCSAMEDLAR
NETEAVKLNLKRPGNLAYLMSASVNLADLQSAHAQLVKQKDIVTVLCQLS
SYPKLVENVSRGHPVSESSVTSWLAVEADSASPDGRLACLSAIEHLIRNQ
EDVDTPLLQAGLMGTLHAILDEPAAAKAAEQAKEAALQDRAAAASSASVT
AAPATAAPASVAAASTAPATATPLSSLPGSSLTAGKKVVEPPSNPNGGGG
GGGGGGGGLLNVKKIMAISQHKKKTREHLMRSSPDILDRILAVVTKTCFS
LTLRGRNRPRLVQHGLPALCGKVMKARYRLFIKFMAAACIFSLAQSAELC
PDIAESGAADLALEDLDNGGRPGQAGQEESEFLLAQLAVVAQVAVEPRFC
RRLASPETVDLLVVLALGTTPKNKSEYRGAEEANGWKGAGGGGGGGEGRK
SKSSRLGNGGDHADSGGSGCESQDIATKLAPAAKRYSGERVNVATPYVGA
LRYCVVTIVERLGSILDEGGEFERTSSTLEMTSIVEKLVHLVCSVVLTSG
PDEALMCRCARVVADWSSEPRFAKELGTKEAAGRSLAALMRSVSPKTKAG
NYVSVALCNVAAASYCKMQPLSASDDDSAATAASATGASGKAAAKVGDGG
AAPGRNAVKGTNQRQLNESSSSGSTSRISRKSDASDHHNRDSSELSVNRT
QSQSSLSGDDSPGAGGDADGGDQHWLMTTDILRDIIHGCLASASADVKSN
LIKAMNNLMVSETRRAALVEGNEMSSLFELVHGYTPEVRELVARMLWNLT
CERGFHSALLEADVTYTLLELLGSSTTQGAKKIPKQTNSTPLAGGGGGGG
GGGGGGDGSATTASLMGSTPSVGAIHAHDGAGSTVSGERSSIPREDGGGG
ESAQDGSNGTGTNTNGGGAVGGGLGTGGAVGGGTSSGSSGSHTEDGGGKG
SKTIGSSTESGISGVGLTSPEVAGTGHTPTLEVRRNVLGAVMNLTSFSIS
DPRLDPKAVMSLLTLIMREYPNESLNEDTAAHLWVTWQAVVLQLSFVEKY
RPLIVYHGDGQVFSHLKMTNDPMSGKSSVMSMSHDRAYKRLIMGTMVNIS
CEPSLYEELEGQVVQVLREFLSEYEHEASGGGHSTGGILGGSRGGVGMLG
DSGNDGSDADGRGMDEDGVAGGGVGGGGGTGGDTSSRGRDWVRHELCGKL
VSNLFSSKTLRERLSKKPVAGILVGLLCGPPIRCNNGVTSSADSGSTTPA
SATWSSKSGGDNNNTQPGKRATSASSERRAHTNRRHPRKGSKQEGEPPLP
RAPLPEGCGEPRPLLYGGGDEAAAIVSRFVCEMSILYSAEGGFELPQRTF
GALVKIAHYYNYNASATLAAAASDPWKATATGEGGAGGGDGSGGGSRDEA
SIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold