prot_L-elsbetiae_contig514.13207.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig514.13207.1
Unique Nameprot_L-elsbetiae_contig514.13207.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length126
Homology
BLAST of mRNA_L-elsbetiae_contig514.13207.1 vs. uniprot
Match: A0A6H5JGB4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGB4_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.610e-25
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 0
Query:   58 PHNEKKRPRAATALEEVREEERAPAPP-FQPFVRQEPATPQSFGSSMFQSMTWGVGMALAFTAVGMFFR 125
            P   K+RPRA+TALEEVREEERAPA P FQPF++Q+PA PQ+FGSSM QSMTWGVGMALAFTAVGM FR
Sbjct:   33 PRKAKQRPRASTALEEVREEERAPAAPKFQPFLQQDPA-PQTFGSSMLQSMTWGVGMALAFTAVGMMFR 100          
BLAST of mRNA_L-elsbetiae_contig514.13207.1 vs. uniprot
Match: V9F8I3_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=V9F8I3_PHYPR)

HSP 1 Score: 53.9 bits (128), Expect = 8.320e-7
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query:   80 APAPPFQPFVRQEPATPQSFGSSMFQSMTWGVGMALAFTAVGMFF 124
            AP PP  PFV+ E  TPQ+FG  M +S  WG+GMA AF+ VG+ F
Sbjct:   58 APPPPANPFVQSEQQTPQTFGGVMKESFVWGLGMAAAFSVVGIIF 102          
BLAST of mRNA_L-elsbetiae_contig514.13207.1 vs. uniprot
Match: V9F9J0_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9F9J0_PHYPR)

HSP 1 Score: 53.9 bits (128), Expect = 1.060e-6
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query:   80 APAPPFQPFVRQEPATPQSFGSSMFQSMTWGVGMALAFTAVGMFF 124
            AP PP  PFV+ E  TPQ+FG  M +S  WG+GMA AF+ VG+ F
Sbjct:   58 APPPPANPFVQSEQQTPQTFGGVMKESFVWGLGMAAAFSVVGIIF 102          
BLAST of mRNA_L-elsbetiae_contig514.13207.1 vs. uniprot
Match: H3H280_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H280_PHYRM)

HSP 1 Score: 53.1 bits (126), Expect = 2.140e-6
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query:   80 APAPPFQPFVRQEPATPQSFGSSMFQSMTWGVGMALAFTAVGMFF 124
            AP PP  PFV+ E   PQSFG  M +S  WG+GMA+AF+ VG+ F
Sbjct:   54 APPPPANPFVQSEQQAPQSFGGVMKESFLWGMGMAVAFSVVGVVF 98          
BLAST of mRNA_L-elsbetiae_contig514.13207.1 vs. uniprot
Match: G4YSZ9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YSZ9_PHYSP)

HSP 1 Score: 51.6 bits (122), Expect = 4.770e-6
Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 0
Query:   65 PRAATALEEVREEERAPAPPFQPFVRQEPATPQSFGSSMFQSMTWGVGMALAFTAVGMFF 124
            P+ + AL E      AP PP  PFV  E   PQ+FG  M +S  WG+GMA+AF+ VG+ F
Sbjct:   38 PKLSNALTEAP----APPPPANPFVHSEQQPPQTFGGVMKESFLWGMGMAVAFSVVGIVF 93          
BLAST of mRNA_L-elsbetiae_contig514.13207.1 vs. uniprot
Match: A0A0N7L8A4_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8A4_PLAHL)

HSP 1 Score: 50.8 bits (120), Expect = 1.320e-5
Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 0
Query:   45 DFQVLPFPPPPLTPHNEKKR--PRAATALEEVREEERAPAPPFQPFVRQEPATPQSFGSSMFQSMTWGVGMALAFTAVGMFF 124
            DF  L    P     +E +R  P+   AL +V     +P PP  PF++ E   PQ+FG  M +S  WG+GMA AF+ VG+ F
Sbjct:   11 DFSTLKRAKPIRVKKSESRRVIPKQTNALTQV-----SPPPPTIPFLQSEQQAPQTFGGIMKESFMWGMGMAAAFSVVGIIF 87          
BLAST of mRNA_L-elsbetiae_contig514.13207.1 vs. uniprot
Match: A0A225W0N2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W0N2_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 4.480e-5
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0
Query:   87 PFVRQEPATPQSFGSSMFQSMTWGVGMALAFTAVGMFF 124
            PFV+ E  TPQ+FG  M +S  WG+GMALAFT +G+ F
Sbjct:   60 PFVQSEQQTPQTFGGMMKESFLWGIGMALAFTVIGVAF 97          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig514.13207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JGB4_9PHAE2.610e-2579.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
V9F8I3_PHYPR8.320e-755.56Uncharacterized protein n=6 Tax=Phytophthora paras... [more]
V9F9J0_PHYPR1.060e-655.56Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
H3H280_PHYRM2.140e-655.56Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
G4YSZ9_PHYSP4.770e-646.67Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A0N7L8A4_PLAHL1.320e-539.02Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A225W0N2_9STRA4.480e-557.89Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..106
NoneNo IPR availableTMHMMTMhelixcoord: 107..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig514contigL-elsbetiae_contig514:10420..11692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig514.13207.1mRNA_L-elsbetiae_contig514.13207.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig514 9732..11725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig514.13207.1 ID=prot_L-elsbetiae_contig514.13207.1|Name=mRNA_L-elsbetiae_contig514.13207.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
MMLCRPDQQRHPCIFIPLVLSHLDSLRNDSVRNLPKYAPHGDGFDFQVLP
FPPPPLTPHNEKKRPRAATALEEVREEERAPAPPFQPFVRQEPATPQSFG
SSMFQSMTWGVGMALAFTAVGMFFR*
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