prot_L-elsbetiae_contig5132.13200.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5132.13200.1
Unique Nameprot_L-elsbetiae_contig5132.13200.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length93
Homology
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BLAST of mRNA_L-elsbetiae_contig5132.13200.1 vs. uniprot
Match: A0A6H5JHT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT5_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 2.830e-33
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0 
Query:    2 VLCCIGVAASVGAA-KWNRGRPKRRMLGNIASGRDFIDVLAKEVAELEAQIALAAEINDLETARDEHERETREYDEQVTQVLTHLDKCEGGGD 93
            V   + VAA+   A KW  G  KRRMLGNIASGR+FID L+ EVA+LEA IALAAE +DL+TAR EHER++RE+DE VTQVLTHLDKC GGG+
Sbjct:   16 VFALVAVAATTAVARKWKSGGSKRRMLGNIASGREFIDTLSAEVADLEATIALAAEASDLDTARQEHERKSREHDESVTQVLTHLDKCTGGGE 108
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BLAST of mRNA_L-elsbetiae_contig5132.13200.1 vs. uniprot
Match: D7G4A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4A6_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 3.080e-30
Identity = 61/93 (65.59%), Postives = 74/93 (79.57%), Query Frame = 0 
Query:    1 AVLC-CIGVAASVGAA-KWNRGRPKRRMLGNIASGRDFIDVLAKEVAELEAQIALAAEINDLETARDEHERETREYDEQVTQVLTHLDKCEGG 91
            AV+C  + VA +   A KW  G  KRRMLGNIASGR+F+D L+ EVA+LEA IALAAE +DL+TAR E+ER++RE+DE VTQVLTHLDKC GG
Sbjct:   14 AVVCGLVAVAGTTAVARKWKSGGTKRRMLGNIASGREFLDALSAEVADLEATIALAAEASDLDTARKENERKSREHDEHVTQVLTHLDKCTGG 106
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5132.13200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHT5_9PHAE2.830e-3367.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4A6_ECTSI3.080e-3065.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 37..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5132contigL-elsbetiae_contig5132:3011..9098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5132.13200.1mRNA_L-elsbetiae_contig5132.13200.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5132 3009..9098 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5132.13200.1 ID=prot_L-elsbetiae_contig5132.13200.1|Name=mRNA_L-elsbetiae_contig5132.13200.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp
AVLCCIGVAASVGAAKWNRGRPKRRMLGNIASGRDFIDVLAKEVAELEAQ
IALAAEINDLETARDEHERETREYDEQVTQVLTHLDKCEGGGD
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