prot_L-elsbetiae_contig4906.12840.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4906.12840.1
Unique Nameprot_L-elsbetiae_contig4906.12840.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
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BLAST of mRNA_L-elsbetiae_contig4906.12840.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 4.060e-42
Identity = 110/228 (48.25%), Postives = 133/228 (58.33%), Query Frame = 0 
Query:    2 EVSEVERREAAARLSLVGAFYGDKSRLQHNTTIAHTAVEHARAALRVATPLQALRIA------------VANQYNLGED--ESLFKWLGIVKPPPLTLPGSGDGLDGDE-ESGAEDEEEAWVVPFGDT-----AQEVVPAPSWLWTPWP--RGGLVPSRPR--NHRGRMAAPDPATRVVSAVATFGSLPIQREVELWVAGTGARQNQLRKLMAVEERELSKAWVTLWG 205
            EV+ V RR+ AAR SLV AFY     L+H       A E+AR+ALRVA P  ++                  Q   GE   E LFKWLGIV+PPP T    GD    +E + GA  +E+AW VPF D        EV+P P  L+TPWP  R G V  RP   + RGR  A DPA+R+V A +TFG+L ++ EVELWVAGT  RQ  LR+LMAV+ERELSKAWV LW 
Sbjct:  638 EVNAVRRRDEAARSSLVEAFYSGDDLLRH------IAAEYARSALRVAPPFTSVAATDRPRAFWSRLEQYLQQQANGEQNGEPLFKWLGIVEPPPPT----GDQSTWEEGDDGAVADEDAWEVPFADAEIEVETFEVLPPPRRLFTPWPSARTGRVDLRPTPPSSRGRRHALDPASRLVLATSTFGTLNLRAEVELWVAGTNIRQEGLRRLMAVQERELSKAWVALWS 855
[Close]
BLAST of mRNA_L-elsbetiae_contig4906.12840.1 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 6.400e-39
Identity = 105/229 (45.85%), Postives = 134/229 (58.52%), Query Frame = 0 
Query:    2 EVSEVERREAAARLSLVGAFYGDKSRLQHNTTIAHTAVEHARAALRVATPLQAL-----------RIAVANQYNL-GED--ESLFKWLGIVKPPPLTLPGSGDGLDG-DEESGAEDEEEAWVVPFGDT-----AQEVVPAPSWLWTPWP-----RGGLVPSRPRNHRGRMAAPDPATRVVSAVATFGSLPIQREVELWVAGTGARQNQLRKLMAVEERELSKAWVTLWG 205
            +V+ V RR+ AAR SLV AFY     L+H       A E+AR+ALRVA P  ++           R+    Q    GE   E LFKWLGIV+PPP T    GD     D++ GA  +E+AW  PF +        E++P P  L+T WP     R  L P+ P +  GR  A DPA+R+VSA +TFG+L ++ EVELWVAG+  RQ  LR+LMAV+ERELSKAWV LWG
Sbjct:  394 KVNVVRRRDEAARSSLVEAFYSGDDLLRH------IAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGEQNGEPLFKWLGIVEPPPPT----GDQSTWKDDDDGAVADEDAWEAPFANAEIEEETFEILPPPQTLFTAWPSARTERVDLRPTPPSSW-GRRRALDPASRLVSATSTFGTLRLRAEVELWVAGSNIRQKGLRRLMAVQERELSKAWVALWG 611
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4906.12840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6K5_ECTSI4.060e-4248.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JAV0_9PHAE6.400e-3945.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4906contigL-elsbetiae_contig4906:9340..10134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4906.12840.1mRNA_L-elsbetiae_contig4906.12840.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4906 9340..10166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4906.12840.1 ID=prot_L-elsbetiae_contig4906.12840.1|Name=mRNA_L-elsbetiae_contig4906.12840.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
MEVSEVERREAAARLSLVGAFYGDKSRLQHNTTIAHTAVEHARAALRVAT
PLQALRIAVANQYNLGEDESLFKWLGIVKPPPLTLPGSGDGLDGDEESGA
EDEEEAWVVPFGDTAQEVVPAPSWLWTPWPRGGLVPSRPRNHRGRMAAPD
PATRVVSAVATFGSLPIQREVELWVAGTGARQNQLRKLMAVEERELSKAW
VTLWG*
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