prot_L-elsbetiae_contig4894.12817.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4894.12817.1
Unique Nameprot_L-elsbetiae_contig4894.12817.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length302
Homology
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BLAST of mRNA_L-elsbetiae_contig4894.12817.1 vs. uniprot
Match: D8LQ05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ05_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.740e-72
Identity = 172/305 (56.39%), Postives = 196/305 (64.26%), Query Frame = 0 
Query:    1 RGSRPSRSAAVTRWDADLDRARDAHRKKQWTEVQQWCTRVIDIADDWNAIEQAHLRLALAEQKRTGADGGRRAFQHGIEHCPSSDTLMLAWALMESKIKN-ARSRKIAKALLRRAVALNPKKNSPVLRWAVFDDLDRVVEAAGGAAVQAVRSALSPGQXXXXXXXXXXXXXXXXXXXXXXXXXX-TRA-EEMEERVFATDLLELCRSNQALQKEGERQEEEEVRQENQDLPVVAAAIXXXXXXXXXXXXXXXXXXXXPSARFEELAEELERRGGGVEGRGRELCGSWKLVFTTCTECDRLLTRTG 302
            R S   RS  +TRWDA L+RAR AHR K WTEVQ WC+RVID+ADDWNA+EQAHLRLALA QK +G  GGRRAFQ GI  CPSSDTL++AWALMESKIKN A SR+ A AL+RRA+ALNP KN  VL W+VF     + EAAG               XXXXXX                     TRA E  EE + AT LL+LC SN+  Q+  E               V  AA XXXXXXXXXXXXXXXXXXXXPS RF+ELA ELER+GGG     R L G+W+LVFTT  +C+R L+RTG
Sbjct:   51 RSSLSPRSKPLTRWDAQLERARSAHRVKDWTEVQHWCSRVIDLADDWNAVEQAHLRLALAAQKSSGVAGGRRAFQQGIRDCPSSDTLLVAWALMESKIKNSAHSRRRAWALIRRAIALNPNKNRRVLSWSVFAADLALAEAAGXXXXXXXXXXXXXXXXXXXXXLPEPTAAGGKGIGGAAAGGVRTRALEREEETILATKLLDLCHSNKGFQEAPE---------------VPPAATXXXXXXXXXXXXXXXXXXXXPSERFQELAGELERKGGGAAAGVRALSGTWRLVFTTSADCNRYLSRTG 340
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4894.12817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ05_ECTSI1.740e-7256.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..225
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 13..158
e-value: 1.7E-7
score: 32.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 34..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4894contigL-elsbetiae_contig4894:117..2464 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4894.12817.1mRNA_L-elsbetiae_contig4894.12817.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4894 117..2464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4894.12817.1 ID=prot_L-elsbetiae_contig4894.12817.1|Name=mRNA_L-elsbetiae_contig4894.12817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=302bp
RGSRPSRSAAVTRWDADLDRARDAHRKKQWTEVQQWCTRVIDIADDWNAI
EQAHLRLALAEQKRTGADGGRRAFQHGIEHCPSSDTLMLAWALMESKIKN
ARSRKIAKALLRRAVALNPKKNSPVLRWAVFDDLDRVVEAAGGAAVQAVR
SALSPGQQQQQQQQQPRGDHPSSSSSGGGCRRTTRAEEMEERVFATDLLE
LCRSNQALQKEGERQEEEEVRQENQDLPVVAAAIAPAVAPAVAPSPAAVK
ASAAPSARFEELAEELERRGGGVEGRGRELCGSWKLVFTTCTECDRLLTR
TG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf