prot_L-elsbetiae_contig4869.12782.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4869.12782.1
Unique Nameprot_L-elsbetiae_contig4869.12782.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length845
Homology
BLAST of mRNA_L-elsbetiae_contig4869.12782.1 vs. uniprot
Match: A0A6H5JZJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ7_9PHAE)

HSP 1 Score: 397 bits (1021), Expect = 2.230e-127
Identity = 254/398 (63.82%), Postives = 301/398 (75.63%), Query Frame = 0
Query:  448 MRQAITARRLANSPPAPSPSKKPKRAGPQLTPKDLAKLAKKQLGTLRKLLDGSGRAYPGPCGAERPVGEIVKFVKKAHSAWMASRQVSSSGVSASQGTKSGGGAMLLAGPPGAGKTTAFLAAAKALTVGVTNVTTLRFVTIKSDTLRADDPNDIFSKVLRAVTTSKASLDGDRALETLRKLTEPSRFFTVFCIEDMHELLGPAALQRLLDVAYRTTSSFAVVYMMSSLDRAIATRFEQGLQRRECRMVHMFPCEEDRLRAILGQSLGASDADDKDGEVVASLVNKAALDTIAKTVARVCGNIRVALTVCEVAFAERLKELEHYIAVAAPEASSSSSSRGAXXXXXXXXXXXXXXXXXXXRGSSNCSPLPSSPTGSV---TASVLLTVAGAKAAINSVM 842
            MRQA+TARRLA SPPAPSP+K+PKRA PQ+T K+L +LA KQL T+R +LDG+ R +PGPCG ERPV ++VKFVKKAH+AW+A  Q  ++ V A QG   G GAM+LAGP G+GK+TAF AAAKA  VGV  VTTLRFVTIK D L  DDPNDIFSKVLR+VT ++  +DG RALE L +L+EPSRF TVF +ED+ + L    L+RLLD+AY+  S FAVVYM+ SLDRAI  +FEQG++RR+CR++HM PCEEDRLRAILGQSLGAS  DDKDGEVVA LVNKAALDTIA  VARV G+IRVAL VCEVA   R++ELE     A+   S        XXXXXXXXXXXXXXXXXXX       P P+ P  +    T+SVLLTV GAKAA+N  +
Sbjct:    1 MRQAVTARRLAKSPPAPSPAKRPKRAAPQVTLKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNN-VGALQGMI-GAGAMVLAGPRGSGKSTAFQAAAKASIVGVAKVTTLRFVTIKGDQLNEDDPNDIFSKVLRSVTNAR--MDGKRALEELGRLSEPSRFLTVFAVEDVKQTLSSVTLERLLDLAYKGGSPFAVVYMVPSLDRAIELKFEQGMKRRDCRVIHMMPCEEDRLRAILGQSLGASGPDDKDGEVVAGLVNKAALDTIASVVARVSGSIRVALHVCEVALGNRVRELEKKCIAASSSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPTGPKTAAAVTTSSVLLTVDGAKAALNEFL 394          
BLAST of mRNA_L-elsbetiae_contig4869.12782.1 vs. uniprot
Match: D8LKB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB1_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 1.300e-97
Identity = 307/574 (53.48%), Postives = 343/574 (59.76%), Query Frame = 0
Query:    1 YLGETPEWEFIEHDEEHLLPFKNNRADLCKQRLGAQLKHQFGPALAAADAMIRQQXXXXXXXXXXXXXXXXXXXPASKAKIAHMNPKRTGVLLDFGTGTSFASFAELWDYLRHNGWATLPGKGLASWYYFPPGSDPKMLSPVLRRDYFDSEDAVIDHVRRTGLERPAPVGAAIPRSSPAPKTRAGSSSRLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPAXKAAKVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKATSNGCTAXXXXXXXAPSAKKGASXXXXXXXXXXXXXXXXXXGNGDGVARLDVHDRSASEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQDRREKE--RNMEPPAVGGKRSHGRSMQVEAAHASSPRG-APNLT-QVMRQAITARRLANSPPAPSPSKKPKRAGPQLTPKDLAKLAKKQLGTLRKLLDGSGRAYPGPCGAERPVGEIVKFVKKAHSAWMASRQVSSSGVSASQGTKSGGGAMLLAGPPGAGKTTAFLAAA 570
            YLGETPEWEFI  D+EHLLPFK +R  L KQR                                              A +AHMNPKRTGVLLDFGTGTSFASFAELW+YLRHNGWATLPGKGLASW+YFPPGSDPKM  PVLRRD+FDSEDAVIDHVRRTGLERPAPVG  I RSSP   +R GS+ R+S                                                  PP     + D                      XXXXXXXXXXXXXXXXXX          XXXXXXX         XXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +  R ++  R+ EP AVGGKRSHG++MQVEAA  S PRG APNLT QVMRQA+TARRLA SPPAPSPSK+PKRA PQ+ PK+L +LA KQL T+R +LDG+ R +PGPCG ERPV ++VKFVKKAH+AW+A  Q  ++ V+A QG   G GA++LAGP G+GK+TAF AAA
Sbjct:   17 YLGETPEWEFIARDDEHLLPFKVHRDRLSKQR----------------------------------------------ASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRPGST-RVS---------------------------------------------DARRSPPPTAPTQADPGKPASGKRKPSSRSGAAVAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEKGEGAVPSGGGEARRGRPQQGGRDTEPSAVGGKRSHGKTMQVEAALVSPPRGSAPNLTRQVMRQAVTARRLAKSPPAPSPSKRPKRAAPQVAPKELVRLANKQLKTVRGILDGTERPFPGPCGVERPVADVVKFVKKAHNAWLAQLQQRNN-VAALQGMI-GAGAIVLAGPRGSGKSTAFQAAA 496          
BLAST of mRNA_L-elsbetiae_contig4869.12782.1 vs. uniprot
Match: A0A6H5JYH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH6_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 9.730e-84
Identity = 153/187 (81.82%), Postives = 162/187 (86.63%), Query Frame = 0
Query:    1 YLGETPEWEFIEHDEEHLLPFKNNRADLCKQRLGAQLKHQFGPALAAADAMIRQQXXXXXXXXXXXXXXXXXXXPASKAKIAHMNPKRTGVLLDFGTGTSFASFAELWDYLRHNGWATLPGKGLASWYYFPPGSDPKMLSPVLRRDYFDSEDAVIDHVRRTGLERPAPVGAAIPRSSPAPKTRAGSS 187
            YLGETPEWEFI  D+EHLLPFK +R  LCKQRLGAQLKHQF PALAAAD+M RQQXXXXXXXXXXX        P SKA +AHMNPKRTGVLLDFGTGTSFASFAELW+YLRHNGWATLPGKGLASW+YFPPGSDPKM  PVLRRD+FDSEDAVIDHVRRTGLERPAPVG  I RSSP   +R+GSS
Sbjct:   70 YLGETPEWEFIARDDEHLLPFKPHRDRLCKQRLGAQLKHQFAPALAAADSMTRQQXXXXXXXXXXXSCATPGT-PVSKASMAHMNPKRTGVLLDFGTGTSFASFAELWNYLRHNGWATLPGKGLASWHYFPPGSDPKMRHPVLRRDFFDSEDAVIDHVRRTGLERPAPVGTVIGRSSPGSTSRSGSS 255          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4869.12782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZJ7_9PHAE2.230e-12763.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKB1_ECTSI1.300e-9753.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYH6_9PHAE9.730e-8481.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 534..694
e-value: 2.5E-10
score: 42.4
NoneNo IPR availablePANTHERPTHR10763CELL DIVISION CONTROL PROTEIN 6-RELATEDcoord: 246..761
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 552..664
e-value: 2.6E-4
score: 21.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 548..762

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4869contigL-elsbetiae_contig4869:967..7839 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4869.12782.1mRNA_L-elsbetiae_contig4869.12782.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4869 967..8927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4869.12782.1 ID=prot_L-elsbetiae_contig4869.12782.1|Name=mRNA_L-elsbetiae_contig4869.12782.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=845bp
YLGETPEWEFIEHDEEHLLPFKNNRADLCKQRLGAQLKHQFGPALAAADA
MIRQQQQQQQEQSSAAGDGSGSGSPASKAKIAHMNPKRTGVLLDFGTGTS
FASFAELWDYLRHNGWATLPGKGLASWYYFPPGSDPKMLSPVLRRDYFDS
EDAVIDHVRRTGLERPAPVGAAIPRSSPAPKTRAGSSSRLSGGRRRGSSG
SSPPPPPASSAKPSSTSKRKAPPSASEGTASAAAAAPPASGPPAAKAAKV
DAAPGASAAASSPAPPTAAAVATAAAPVDNVVAEAGAAVANGKATSNGCT
AAAAATTAAPSAKKGASAAAAAAGAAASAAAASAAGNGDGVARLDVHDRS
ASEGVGGSGSGASSDSDDDDDDDDEVLVVEGLDDEQPSNGNGSGNGNSNS
EDRQDRREKERNMEPPAVGGKRSHGRSMQVEAAHASSPRGAPNLTQVMRQ
AITARRLANSPPAPSPSKKPKRAGPQLTPKDLAKLAKKQLGTLRKLLDGS
GRAYPGPCGAERPVGEIVKFVKKAHSAWMASRQVSSSGVSASQGTKSGGG
AMLLAGPPGAGKTTAFLAAAKALTVGVTNVTTLRFVTIKSDTLRADDPND
IFSKVLRAVTTSKASLDGDRALETLRKLTEPSRFFTVFCIEDMHELLGPA
ALQRLLDVAYRTTSSFAVVYMMSSLDRAIATRFEQGLQRRECRMVHMFPC
EEDRLRAILGQSLGASDADDKDGEVVASLVNKAALDTIAKTVARVCGNIR
VALTVCEVAFAERLKELEHYIAVAAPEASSSSSSRGAASPSATGGGDGAS
SPHGGGRGSSNCSPLPSSPTGSVTASVLLTVAGAKAAINSVMQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase