prot_L-elsbetiae_contig4858.12766.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4858.12766.1
Unique Nameprot_L-elsbetiae_contig4858.12766.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length187
Homology
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BLAST of mRNA_L-elsbetiae_contig4858.12766.1 vs. uniprot
Match: A0A6H5LAU8_9PHAE (CXXC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU8_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.410e-48
Identity = 82/93 (88.17%), Postives = 87/93 (93.55%), Query Frame = 0 
Query:   95 MLCPSIVLAKNPNRDGRLWPARLCDRDEVEESFAHSDLNAEAQAHRALRALLVFLCEGGHHYFAWISESDVFPMPAGDEGLGEEAVEWPVDFS 187
            +L PSIVLAKNPNR G LWPARLCDRDEVEESFAHSDLNAEAQAHRALRALLVFLCEGGHHYFAW+SESD+FPMP+GDEGLG EA EW +DFS
Sbjct:  522 LLRPSIVLAKNPNRGGNLWPARLCDRDEVEESFAHSDLNAEAQAHRALRALLVFLCEGGHHYFAWVSESDIFPMPSGDEGLGAEAGEWLIDFS 614
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BLAST of mRNA_L-elsbetiae_contig4858.12766.1 vs. uniprot
Match: D7G6J0_ECTSI (CXXC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J0_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 3.770e-26
Identity = 59/93 (63.44%), Postives = 63/93 (67.74%), Query Frame = 0 
Query:   95 MLCPSIVLAKNPNRDGRLWPARLCDRDEVEESFAHSDLNAEAQAHRALRALLVFLCEGGHHYFAWISESDVFPMPAGDEGLGEEAVEWPVDFS 187
            +L PSIVLAKNPNR G LWPARLCDRDEVEESFAHSDLNAEAQ                        ESD+FPMP+GDEGLG EA EW +DFS
Sbjct:  180 LLRPSIVLAKNPNRGGNLWPARLCDRDEVEESFAHSDLNAEAQ------------------------ESDIFPMPSGDEGLGAEAGEWLIDFS 248
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4858.12766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAU8_9PHAE1.410e-4888.17CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6J0_ECTSI3.770e-2663.44CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4858contigL-elsbetiae_contig4858:643..5273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4858.12766.1mRNA_L-elsbetiae_contig4858.12766.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4858 641..5273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4858.12766.1 ID=prot_L-elsbetiae_contig4858.12766.1|Name=mRNA_L-elsbetiae_contig4858.12766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp
DGGGSGDVGERPRRGSPSPFADAGAAGTAEGPRSQSLQRRMPSPPLLPPG
GGARAGPTTTTTRYPVAASGGQRGGVASDVSAGAGGGAEEERDCMLCPSI
VLAKNPNRDGRLWPARLCDRDEVEESFAHSDLNAEAQAHRALRALLVFLC
EGGHHYFAWISESDVFPMPAGDEGLGEEAVEWPVDFS
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