prot_L-elsbetiae_contig485.12757.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig485.12757.1
Unique Nameprot_L-elsbetiae_contig485.12757.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length944
Homology
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BLAST of mRNA_L-elsbetiae_contig485.12757.1 vs. uniprot
Match: D8LTM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM0_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 1.580e-56
Identity = 121/229 (52.84%), Postives = 150/229 (65.50%), Query Frame = 0 
Query:    7 VFLVPKGLTYWLNGVSGYNCLGFKVAMGACLSTSNALTFIHLFIFSNSLLAHQTSTRWTHLRWLGLILTAFYWGALVVAEATRTASELXXXXXXXXXXXXXASPCADTATDDARCLSHVDDAAFSVKWVAQLLNHMFQAAAYLLPLRSQVSGAAK-IRLVSGGAAGPSSYRRTLGLPVWQSIISESVSLVMTTVVAALAFAKAQGRLDAMPMFAVEVLDNAANLAAIFY 234
            +FL   GL YW NG+ GY+CL F   MGA LS SNA+ FIHLFI SNS+  H+ ++RW H RWLG+I+T F+W ALV  E TRTA +                 CA     ++RC++ VD  A +VKWVAQLLN +FQ  A+L+PLR  V+GAA  +RL SGG     S R+ L + VWQ+IISE +SLVMT  VA +A AKA+G L   P+FAVEVLDN  NLAAIFY
Sbjct:   56 LFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFILSNSM--HRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGK------------EEHGGCA----GESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGGLKATGSCRKCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFY 266
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BLAST of mRNA_L-elsbetiae_contig485.12757.1 vs. uniprot
Match: A0A6H5JF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF49_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 7.590e-32
Identity = 79/177 (44.63%), Postives = 102/177 (57.63%), Query Frame = 0 
Query:    6 AVFLVPKGLTYWLNGVSGYNCLGFKVAMGACLSTSNALTFIHLFIFSNSLLAHQTSTRWTHLRWLGLILTAFYWGALVVAEATRTASELXXXXXXXXXXXXXASPCADTATDDARCLSHVDDAAFSVKWVAQLLNHMFQAAAYLLPLRSQVSGAAK-IRLVSGGAAGPSSYRRTLGL 181
            A  L   GL YW NG+ GY+C  F   MGA LS SNA+ FIHLFI SNS+  H+ ++RW H RW G+I+  F+W ALV  E TRTA +                 CA     ++RC++ VD  A +VKW+ QLLN MFQ  A+L+PLR   + AA  +RL SGG     S R+ L +
Sbjct:   12 APLLAFTGLAYWFNGIGGYDCFAFSTIMGASLSASNAMGFIHLFILSNSM--HRANSRWKHFRWFGVIIMVFHWVALVALEGTRTAGK------------EERGGCA----GESRCVTDVDGLALTVKWIMQLLNQMFQTVAFLVPLRMPAAEAANGVRLFSGGLKATGSCRKCLNI 170
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig485.12757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTM0_ECTSI1.580e-5652.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF49_9PHAE7.590e-3244.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..943
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..66
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 66..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig485contigL-elsbetiae_contig485:23022..31211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig485.12757.1mRNA_L-elsbetiae_contig485.12757.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig485 23022..31211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig485.12757.1 ID=prot_L-elsbetiae_contig485.12757.1|Name=mRNA_L-elsbetiae_contig485.12757.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=944bp
MGGGGAVFLVPKGLTYWLNGVSGYNCLGFKVAMGACLSTSNALTFIHLFI
FSNSLLAHQTSTRWTHLRWLGLILTAFYWGALVVAEATRTASELDLDGGG
GGAGASSASPCADTATDDARCLSHVDDAAFSVKWVAQLLNHMFQAAAYLL
PLRSQVSGAAKIRLVSGGAAGPSSYRRTLGLPVWQSIISESVSLVMTTVV
AALAFAKAQGRLDAMPMFAVEVLDNAANLAAIFYTSNATPRYAHPRPRSG
RTEGNTPRPLTGPPYYRSGCRPLNGSFGGAFGGSFGGTGSASSRRSNINS
NSNSNSNSNSNISSSSSSSSSSSSNNSNSAKADGLPARPHSIEAVSATPS
FSSFSSSYLQRRYGGPIKRLPPVLDMSPEQTEGSDDGSRSRSRSRSPARS
RSRSPARSRPPARSQSSPADDGTLPDGDPIVPSRSRSRSPSRLPPTSDPS
DGTPDAPPSPSSAPSSRGNLSVAAAAATAAAAAAAAATEVNTAGRVGETQ
RSASVPPKRLGRPMGPLFFASRTAKSREVQRQLSYPAGNFSGGVREAAVD
CRGAMNRERPCRSSSAGAGAGPFVAVFDGIDPATPSMDTENSASTRLVAA
APGAIHRRRDDERYAAAVARATGADTMLLRKVQPQQDRQKLDQEAGTPPP
PVPSSNTSNLAARGMAAAAAAAAAVLDAESSGRDGDDAGPEARPGSECVG
GVNFIPPGVSPTVAAAAAAAAAATVMWPFPLSSPESRGSSLGGSQGRRDS
GSMPARTTTASARVGAKPSPSASPANIEAAGRKGTEPPVAAAEAGSRWRR
PQKQRQQRQARANAGPASAARETTGAPAVAEGSGPFASPVGLEVNIIARV
PATATTVAGATTVAGATTVAGATGGAGSATAAAAAVAVKNGPLIRRSSSV
AAWSAFSAASWCSSSFDGNENNCGAPAATVRSPASYFNASHQA*
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