prot_L-elsbetiae_contig4835.12733.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4835.12733.1
Unique Nameprot_L-elsbetiae_contig4835.12733.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length325
Homology
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BLAST of mRNA_L-elsbetiae_contig4835.12733.1 vs. uniprot
Match: D7G8M6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M6_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.070e-27
Identity = 76/155 (49.03%), Postives = 82/155 (52.90%), Query Frame = 0 
Query:   76 LPSQQTRTVLSGSLSRCSPVFSASSDTVFCACSSIVLGVSVETGEELLRLVGHAGDVTAMLVLPPGAYGAADSGGAAASTSARHQRLMTSSLDGTLRLWDVSADLMSLEGEAERCLRVLNVGMPVYQLFMGRQDSSGAALDVIIVTKEGTSSLHG 230
            L S++TR VLSGSL RCSPVFS SSD VFCACSS VLGVSVETGE+                                                               GEAERCLRV NVGMPVY LFMGRQD SG ALDVI+VTKEGT++LHG
Sbjct:   30 LASEETRAVLSGSLFRCSPVFSPSSDAVFCACSSSVLGVSVETGEQ---------------------------------------------------------------GEAERCLRVYNVGMPVYHLFMGRQDGSGTALDVIVVTKEGTAALHG 121
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BLAST of mRNA_L-elsbetiae_contig4835.12733.1 vs. uniprot
Match: A0A6H5KD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD90_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.650e-11
Identity = 57/165 (34.55%), Postives = 73/165 (44.24%), Query Frame = 0 
Query:   71 VALAALPSQQTRTVLSGSLSRCSPVFSASSDTVFCACSSIVLGVSVETGEELLRLVGHAGDVTAMLVLPPGAYGAADSGGAAASTSARHQRLMTSSLDGTLRLWDVSADLMSLEGEAERCLRVLNVGMPVYQLFMGRQDSSGAALDVIIVTKEGTSSLHGLQKDG 235
            VA   L S +TR VLSG L RCSPVFS SSDTVFCACSS VLGVSVETGE+ +                                                        + ++      C+  L+              ++G+A+DVI+VTKEGT+SLHG  ++G
Sbjct:   61 VAPPILASDETRAVLSGCLFRCSPVFSPSSDTVFCACSSSVLGVSVETGEQTI--------------------------------------------------------ISNILNAQSSCVHRLSPSPANNFPPRDNTGNNGSAMDVIVVTKEGTASLHGYGEEG 169
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4835.12733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8M6_ECTSI1.070e-2749.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD90_9PHAE3.650e-1134.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 118..175
e-value: 2.9E-4
score: 30.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 162..177
score: 8.871
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 12..210
e-value: 2.7E-9
score: 38.3
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 162..176
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 55..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4835contigL-elsbetiae_contig4835:966..4681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4835.12733.1mRNA_L-elsbetiae_contig4835.12733.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4835 964..4681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4835.12733.1 ID=prot_L-elsbetiae_contig4835.12733.1|Name=mRNA_L-elsbetiae_contig4835.12733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=325bp
ALHSSRQASAARGEMQPPAARSKREGRRSSVSSAGRSSSSASSSTNKNRR
ASSGGGQQLATVAGGGGAGAVALAALPSQQTRTVLSGSLSRCSPVFSASS
DTVFCACSSIVLGVSVETGEELLRLVGHAGDVTAMLVLPPGAYGAADSGG
AAASTSARHQRLMTSSLDGTLRLWDVSADLMSLEGEAERCLRVLNVGMPV
YQLFMGRQDSSGAALDVIIVTKEGTSSLHGLQKDGGGGENDEARQKKKTA
AGTVGAARSPNGVQGMAGGDDADLTSDDEEEEDDDSSSDDDNDDDVEVLD
GGGSGDDDDVVEIDAEGGTASTKGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR011047Quinoprotein_ADH-like_supfam