prot_L-elsbetiae_contig483.12728.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig483.12728.1
Unique Name	prot_L-elsbetiae_contig483.12728.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	209

Homology

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: D7FV33_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV33_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 4.900e-117
Identity = 173/208 (83.17%), Postives = 183/208 (87.98%), Query Frame = 0

Query:    1 MKTTGAAVLSLVASTQAFHVPMLATRTPRTLSMSAAASPTAPLSDAEALASLEAIGGYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQQSGDTTPFYDPFKGWPKTEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGSVPDFCLPF 208
            MK TGA VL +VASTQAFH+P     +    S ++ AS   PLSDAEA+ASLEAIGGYDVET+GKPLDPL+LAKYIPAETLRKYETVH RVAMLACVGYAFPQIFGMFDATDV SANGIDAL QTAP A AQI+GACGI EAAQWKHQQSGDTTPFYDPFKGWPKTE QQEKMKMRELKNGRAAMLCWASFVSA+LIPGSVPDF LPF
Sbjct:    1 MKITGATVLGMVASTQAFHMPANVKPSVARRSSTSLASALEPLSDAEAMASLEAIGGYDVETLGKPLDPLHLAKYIPAETLRKYETVHCRVAMLACVGYAFPQIFGMFDATDVQSANGIDALFQTAPEAWAQIIGACGIAEAAQWKHQQSGDTTPFYDPFKGWPKTEKQQEKMKMRELKNGRAAMLCWASFVSAALIPGSVPDFALPF 208

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: A0A7S0ASU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASU6_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.910e-32
Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 0

Query:   57 GYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKH-----QQSGDTTPFYDPFKGWPKTEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGS 200
            G D+E+ GK  DPLNLA++IPA+  R+ E  + R AMLA VG+ FP   G FD+ DVTS + + A+++  P   AQ V  CG  EA ++K        +G+  P  D  KG+PK E ++ KM+++ELKNGR AM+  ASF+SA  IPGS
Sbjct:   49 GVDLESGGKFFDPLNLAQWIPAKWARETELANGRSAMLATVGWFFPYTLGTFDSQDVTSTDPMGAIMEADPQWWAQFVILCGTFEAYKYKKALEGKSYTGNGEPVIDYLKGYPKEEDERRKMELKELKNGRLAMIGVASFLSAHFIPGS 197

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: A0A7S1H281_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H281_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.390e-30
Identity = 69/156 (44.23%), Postives = 98/156 (62.82%), Query Frame = 0

Query:   53 EAIGGYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQ-----QSGDTTPFYDPFKGWPK-TEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGSVP 202
            E++ G DVET  K  DP  L+++IPAE  RK E  + R AMLA VG+ +P+ FG F + DVT+ + I+A++Q  P   AQ +  CG+ E  +++ +      +GD  P  D  K W K ++ ++E +++RELKNGR AML  ASF SA  IPGSVP
Sbjct:   35 ESLVGMDVETGKKFFDPWELSQWIPAEHARKAELANGRSAMLATVGWFWPKFFGTFASDDVTTTDPIEAVMQADPQWWAQFIVLCGVAEFVKYQGELEGKSYTGDGEPVLDWTKTWSKLSDAKKEDIRLRELKNGRLAMLGIASFFSAHFIPGSVP 190

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: A0A7S2R2M8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2M8_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.360e-30
Identity = 75/180 (41.67%), Postives = 104/180 (57.78%), Query Frame = 0

Query:   33 MSAAASPTAPLSDAEALASLEAIG-----GYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQQSGDT-----TPFYDPFKGWPKTEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGSVP 202
            M+++A+  AP + + ++ +L+A       G DVET  K  DP  L+ YIPA+  R+ E  + R AMLA VGY FP  FG FD+TDVT+ + IDA+LQ  P   AQ +  CG  E  +++    G T      P  D    +PK E ++  M ++ELKNGR AM+  A FVS   IPG+VP
Sbjct:   10 MASSAAAFAPATKSASMTALKASDYDSMIGIDVETGKKFFDPWGLSGYIPAKWAREAELSNGRSAMLATVGYVFPAYFGTFDSTDVTTTDPIDAILQADPQWWAQFILLCGAFEGVKYRCALEGKTFTGIGEPAVDYANLYPKEEAKRADMHLKELKNGRLAMIGIAGFVSNHFIPGAVP 189

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: A0A7R9W903_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W903_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.120e-30
Identity = 68/164 (41.46%), Postives = 94/164 (57.32%), Query Frame = 0

Query:   50 ASLEAIGGYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQQSGDTT-----PFYDPFKGWPKTEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGSVPDFCLPF 208
            A  E + G DVET  K  DP   + YIPA+  R+ E  + R AMLA VG+ +PQIFG FD+TDVT+ + I A  +  P   AQ +  CG +EA +++    G ++     P  D  + +P  E  +  M+++ELKNGR AM+  AS+ SA  IPGSVP     F
Sbjct:   38 ADYEGMVGIDVETGNKFFDPCGFSNYIPAKWAREAELANGRSAMLASVGWLWPQIFGTFDSTDVTTTDPIKAFSEADPQWWAQFIIFCGTIEAYKYRKGLEGKSSTGGGEPAVDWMRSYPADEEGRRAMELKELKNGRLAMIAVASYFSAHFIPGSVPSLGYDF 201

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: A0A7S0PIU0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIU0_9STRA)

HSP 1 Score: 118 bits (295), Expect = 9.870e-30
Identity = 72/178 (40.45%), Postives = 106/178 (59.55%), Query Frame = 0

Query:   34 SAAASPTAP--LSDAEALASLEAIGGYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQQS-------GDTTPFYDPFKGWPKTEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGSVP 202
            SA A  TAP   +  +A +  E + G  VET GK  DP  +++Y+PA+  R+ E  + R AMLA VG+ +PQ+ G FD+ DVT+ + IDA++Q  P   AQ +  CG++E   WK+ ++       G   P  D  K +P    ++ +++ +ELKN R AM+ +ASFVSA  IPGSVP
Sbjct:   14 SAFAPNTAPKVTTSLKAASDFEGMTGISVETGGKFFDPWGVSEYMPADWAREVELSNGRSAMLATVGWFWPQVVGTFDSNDVTTTDPIDAIMQADPQWWAQFIIFCGVIE--NWKYNKAKEGKSYTGGGEPAVDWMKLYPSDPAKRLELEEKELKNARLAMIGFASFVSAHFIPGSVP 189

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: A0A7S2D2F8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D2F8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.460e-29
Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 0

Query:   57 GYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQQSGDTTPFYDPFKGWPKTEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGSVP 202
            G  VE   KP DPL LA +   + +R  E  + RVAMLA VG+ +PQ+FG+F++ DVT+ + I A+ Q AP    Q+    G  E+ ++KH+ SG   P +DP    PK  V++      ELKNGR AML  A++ SA  IPGSVP
Sbjct:   59 GATVEVGKKPFDPLGLAAWRDFDEMRACELKNGRVAMLASVGWVWPQMFGLFESDDVTTTDPIAAITQVAPEGWIQMFLLAGCFESLEYKHKMSGTDKPLWDPLDLMPKDPVKKAAKMESELKNGRLAMLSVAAYASAHFIPGSVP 204

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: A0A7S2RJJ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJJ1_9STRA)

HSP 1 Score: 116 bits (290), Expect = 6.120e-29
Identity = 64/146 (43.84%), Postives = 86/146 (58.90%), Query Frame = 0

Query:   57 GYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQQSGDTTPFYDPFKGWPKTEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGSVP 202
            G   E   K  DPL LA+Y   + LR  ET + RVAMLA VG+ +PQIFG +    V + + I+ L      A AQ++    + E   +KH+QSG T P +DP +  PK E  ++ M  +ELKNGR AML +A+FVS   IPG+VP
Sbjct:   48 GATTEVGNKAFDPLKLAQYRDFDELRACETRNGRVAMLASVGWVWPQIFGTWAGGPVKTVDPIETLSAVPVAAWAQMILLASVFEVIDFKHKQSGSTEPVWDPLQLLPKEEKAKKAMMEKELKNGRLAMLAFAAFVSEHFIPGAVP 193

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: A0A1Z5KCJ7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCJ7_FISSO)

HSP 1 Score: 110 bits (274), Expect = 1.270e-26
Identity = 77/208 (37.02%), Postives = 114/208 (54.81%), Query Frame = 0

Query:    1 MKTTGAAVLSLVASTQAFHVPMLATRTPRTLSMSAAASPTAPLSDAEALASLEAIGGYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQ-----QSGDTTPFYDPFKGWPKTE-VQQEKMKMRELKNGRAAMLCWASFVSASLIPGSVP 202
            MKT  AA+LSL     AF  P  + +             + P + AE    + ++ G   E   +  DPL L ++  AE LRK E  + R AMLA VG+ +P+I G FD+ DVT+ + IDA+LQ  P   AQ +  CG++E  +++ +      +GD     D  K W K +  ++  M+++ELKNGR AM+ +AS+V+A  IPGSVP
Sbjct:    1 MKTATAALLSL-GCVSAFQGPSASVK-----------KSSLPATAAE----IASLPGISNECGNRVFDPLELGQWADAEFLRKAELSNGRSAMLANVGWFWPKIVGTFDSDDVTTTDPIDAILQADPQWWAQFLLLCGVIEGVKYRAELEGKSYTGDGPAAIDWAKQWDKLDKTKKADMRLKELKNGRLAMIGFASYVAAYFIPGSVP 192

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BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Match: B7G8E5_PHATC (Fucoxanthin chlorophyll a/c protein, deviant n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8E5_PHATC)

HSP 1 Score: 109 bits (273), Expect = 2.030e-26
Identity = 67/161 (41.61%), Postives = 98/161 (60.87%), Query Frame = 0

Query:   48 ALASLEAIGGYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYAFPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQ-----QSGDTTPFYDPFKGWPKTEV-QQEKMKMRELKNGRAAMLCWASFVSASLIPGSVP 202
            A A L+ + G D+ET  K  DP+ LA++ PA+ LRK E  + R AMLA VG+ +P+I G FD+ DVT+ + I A+ +      AQ    CG++EA +++ +      +G+     D  K W K    Q+E M+++ELKNGR AML +AS+V+   IPGSVP
Sbjct:   33 ATAELDNMLGVDIETGKKIFDPVGLAQWAPADFLRKAELSNGRSAMLANVGWFWPKIVGTFDSQDVTTTDPIKAIAEADLQWWAQFFVFCGMLEAVKYRGELEGKSYTGEGPAVIDWAKQWDKLNADQKESMRLKELKNGRLAMLGFASYVANYYIPGSVP 193

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig483.12728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FV33_ECTSI	4.900e-117	83.17	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
A0A7S0ASU6_9STRA	2.910e-32	46.31	Hypothetical protein (Fragment) n=1 Tax=Minutocell...	[more]
A0A7S1H281_9STRA	1.390e-30	44.23	Hypothetical protein n=1 Tax=Thalassionema nitzsch...	[more]
A0A7S2R2M8_9STRA	2.360e-30	41.67	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7R9W903_9STRA	4.120e-30	41.46	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A7S0PIU0_9STRA	9.870e-30	40.45	Hypothetical protein n=1 Tax=Leptocylindrus aporus...	[more]
A0A7S2D2F8_9STRA	1.460e-29	43.84	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2RJJ1_9STRA	6.120e-29	43.84	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A1Z5KCJ7_FISSO	1.270e-26	37.02	Uncharacterized protein n=2 Tax=Fistulifera solari...	[more]
B7G8E5_PHATC	2.030e-26	41.61	Fucoxanthin chlorophyll a/c protein, deviant n=3 T...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 63..194 e-value: 1.9E-22 score: 80.5
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 55..205 e-value: 5.3E-22 score: 80.5
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 6..202
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 6..202
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..208
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..17 score: 0.5
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 68..200

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig483	contig	L-elsbetiae_contig483:17317..22446 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig483.12728.1	mRNA_L-elsbetiae_contig483.12728.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig483 17279..23502 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig483.12728.1 ID=prot_L-elsbetiae_contig483.12728.1|Name=mRNA_L-elsbetiae_contig483.12728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp
MKTTGAAVLSLVASTQAFHVPMLATRTPRTLSMSAAASPTAPLSDAEALA
SLEAIGGYDVETMGKPLDPLNLAKYIPAETLRKYETVHSRVAMLACVGYA
FPQIFGMFDATDVTSANGIDALLQTAPLALAQIVGACGIVEAAQWKHQQS
GDTTPFYDPFKGWPKTEVQQEKMKMRELKNGRAAMLCWASFVSASLIPGS
VPDFCLPF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR001344	Chloro_AB-bd_pln