prot_L-elsbetiae_contig4827.12719.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4827.12719.1
Unique Nameprot_L-elsbetiae_contig4827.12719.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length362
Homology
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BLAST of mRNA_L-elsbetiae_contig4827.12719.1 vs. uniprot
Match: D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 4.070e-44
Identity = 132/262 (50.38%), Postives = 146/262 (55.73%), Query Frame = 0 
Query:    1 LDLGVLRLCPRTLSSPVGPVRIDTATGRAL-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPDVLAEAGAAFQVGAATPMMAGVFSILKGCVGVEEQAIARALHFL-RGGRANLGAASGGGRDGDGFSAGLE---EEERQEWQAHREASMAVLVQRAMSAAPPGRIGGEVRAAAEMGR-----------------GGGRSGSGGKRSTSAYRSRRLQTALAAVGCMATWSEIYKELSAADAQGG-LLADEKFLPALLRAHRR 239
            LDLGVLRLCP+T SS VG  RID +T RA                               S DVLAEAGAAFQVGAATP+MAGVFSILKGC GVEEQAIA A+HFL RGG  N                      EEE +EWQAHREASMA+LV RAM+++                                  GG R     + STSAYR+RRLQTALAAVGCM TW EI+KELSAAD+ GG LLADE FL  LLR +RR
Sbjct:  612 LDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTASILSSLSLSLPGSSLDASHSRPGRGSTSADVLAEAGAAFQVGAATPLMAGVFSILKGCQGVEEQAIAGAIHFLSRGGNENAAXXXXXXXXXXXXXXXXXXXFEEESEEWQAHREASMAMLVHRAMTSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSR-----RSSTSAYRTRRLQTALAAVGCMTTWMEIFKELSAADSPGGMLLADETFLHELLRTYRR 868
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BLAST of mRNA_L-elsbetiae_contig4827.12719.1 vs. uniprot
Match: A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.070e-28
Identity = 114/262 (43.51%), Postives = 125/262 (47.71%), Query Frame = 0 
Query:    1 LDLGVLRLCPRTLSSPVGPVRIDTATGRAL-PXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPDVLAEAGAAFQVGAATPMMAGVFSILKGCVGVEEQAIARALHFL-RGGRANLGAASGGGRDGDGFSAGLEEEERQEWQAHREASMAVLVQRAMSAAPPGRIGGEVRAAAEMGR-------------------GGGRSGSGGKRSTSAYRSRRLQTALAAVGCMATWSEIYKELSAADAQGG-LLADEKFLPALLRAHRRA 240
            LDLGVLRLCP+T SS VG  RID +T RA                               SPDVLAEAGAAFQVGAATP+MAGVFSILKGC G EEQAIA A+HFL RGG                                                                                    GGG   S    STSAYR+RRLQTALAAVGCMATW EI+KELSAAD++GG LLADE F+  L+RA+RRA
Sbjct:  616 LDLGVLRLCPQTRSSSVGAGRIDRSTVRAGGTSSILSSLALSLPVSSLDASHSHPRTGSTSPDVLAEAGAAFQVGAATPLMAGVFSILKGCQGAEEQAIACAIHFLSRGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGSRIS----STSAYRTRRLQTALAAVGCMATWMEIFKELSAADSRGGMLLADETFVHELMRAYRRA 873
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4827.12719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G086_ECTSI4.070e-4450.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKL7_9PHAE1.070e-2843.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4827contigL-elsbetiae_contig4827:5355..7794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4827.12719.1mRNA_L-elsbetiae_contig4827.12719.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4827 5353..7794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4827.12719.1 ID=prot_L-elsbetiae_contig4827.12719.1|Name=mRNA_L-elsbetiae_contig4827.12719.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=362bp
LDLGVLRLCPRTLSSPVGPVRIDTATGRALPLPLSLSLSLSLSAPPPQKG
TRNSTSTSTSPDVLAEAGAAFQVGAATPMMAGVFSILKGCVGVEEQAIAR
ALHFLRGGRANLGAASGGGRDGDGFSAGLEEEERQEWQAHREASMAVLVQ
RAMSAAPPGRIGGEVRAAAEMGRGGGRSGSGGKRSTSAYRSRRLQTALAA
VGCMATWSEIYKELSAADAQGGLLADEKFLPALLRAHRRAPAATTTATSA
AALGGEGSDRSRGRVEERLQEEEAQGITADSGGGDARDETSVSPAAPVGS
GKVTGLEHPAYSARVKKETSADLGDDGCSGVENDAAEEGGVATESLPVVR
RGSGSSDGGGNG
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