prot_L-elsbetiae_contig4827.12718.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4827.12718.1
Unique Nameprot_L-elsbetiae_contig4827.12718.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length169
Homology
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BLAST of mRNA_L-elsbetiae_contig4827.12718.1 vs. uniprot
Match: D7G088_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G088_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 7.130e-78
Identity = 125/168 (74.40%), Postives = 136/168 (80.95%), Query Frame = 0 
Query:    1 MWRRTHGFHWASLLLFSGVDKAAVADQAARMQSSSVVHLIDHDATSFRLVVHSDSGHTQDQHFFIGGQPRPSPXXXXXXXXXXXXXXXTAKPTVTLSHMRWEKNGQALVLSSIDAATGDEMKVSRHLASQGTVIVQHYTARRAKTGETAEAISIFRKMVRGGDRSGSE 168
            MWRR+HGFHW SLL FSGVDKA VA+QAARMQSSSVVHLIDHDA SFRLVVHSDSG+TQDQHFFIGGQPRPSP                A  T TLS+MRW KNGQ LVL+S+DAATGDEM VSRHLA+QG+VIVQHY ARRAKTGETAEA++IFR+MVR    S SE
Sbjct:  122 MWRRSHGFHWESLLEFSGVDKADVAEQAARMQSSSVVHLIDHDANSFRLVVHSDSGNTQDQHFFIGGQPRPSPT--------------NAPSTATLSNMRWTKNGQGLVLTSVDAATGDEMTVSRHLAAQGSVIVQHYAARRAKTGETAEAVTIFRRMVRATSSSTSE 275
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4827.12718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G088_ECTSI7.130e-7874.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.624

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4827contigL-elsbetiae_contig4827:50..1719 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4827.12718.1mRNA_L-elsbetiae_contig4827.12718.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4827 4..2880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4827.12718.1 ID=prot_L-elsbetiae_contig4827.12718.1|Name=mRNA_L-elsbetiae_contig4827.12718.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp
MWRRTHGFHWASLLLFSGVDKAAVADQAARMQSSSVVHLIDHDATSFRLV
VHSDSGHTQDQHFFIGGQPRPSPTTPTTNNTSSSSPTPTAKPTVTLSHMR
WEKNGQALVLSSIDAATGDEMKVSRHLASQGTVIVQHYTARRAKTGETAE
AISIFRKMVRGGDRSGSE*
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