prot_L-elsbetiae_contig482.12709.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig482.12709.1
Unique Nameprot_L-elsbetiae_contig482.12709.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length126
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig482.12709.1 vs. uniprot
Match: D7FHI0_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI0_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 4.020e-10
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:   77 TVARGITDQAATAAAELRAHATGLVAAGLISRQLSDLIVNRGFAAHLVHR 126
            T A  + D+A +A AELRAHATGL+AAGL+SR+LSDLIVN+GFAAHLV R
Sbjct:  315 TAAEVLADRA-SAEAELRAHATGLLAAGLLSRELSDLIVNKGFAAHLVQR 363
[Close]
BLAST of mRNA_L-elsbetiae_contig482.12709.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 5.530e-10
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:   77 TVARGITDQAATAAAELRAHATGLVAAGLISRQLSDLIVNRGFAAHLVHR 126
            T A  + D+A +A AELRAHATGL+AAGL+SR+LSDLIVN+GFAAHLV R
Sbjct:  334 TAAEILADRA-SAEAELRAHATGLLAAGLLSRELSDLIVNKGFAAHLVQR 382
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig482.12709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHI0_ECTSI4.020e-1072.00LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JDL7_9PHAE5.530e-1072.00LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig482contigL-elsbetiae_contig482:38003..38380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig482.12709.1mRNA_L-elsbetiae_contig482.12709.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig482 38003..38381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig482.12709.1 ID=prot_L-elsbetiae_contig482.12709.1|Name=mRNA_L-elsbetiae_contig482.12709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
VTAEAGLVVAAGEGDRSGSGSVSPGEAGGASASGASASDANAGGALGVGG
HRAGACAGGGVDAAGAGTAGSGASEATVARGITDQAATAAAELRAHATGL
VAAGLISRQLSDLIVNRGFAAHLVHR
back to top