prot_L-elsbetiae_contig4814.12699.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4814.12699.1
Unique Nameprot_L-elsbetiae_contig4814.12699.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length494
Homology
BLAST of mRNA_L-elsbetiae_contig4814.12699.1 vs. uniprot
Match: D7FRL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL8_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 2.990e-139
Identity = 306/539 (56.77%), Postives = 343/539 (63.64%), Query Frame = 0
Query:    1 VTASSFRGTVQASTTRDTSFRVVWRGDAFTTPQDAPSTTMLSQGWSSPKGRGGGRRRSHHPGPVLSQDDELAVSREEACALAAWAKREYPSVTSAER-RG----------------QQAATAG--------------------ESDAA-RPGSLGSVREGVETTVRACVLEASEVERLWLWESAGGKRRKDLVSRATALLTDGLHDMTLQLWGDMASDNTIQSLREGSIAAARG---ARDGAMKQPAVFEFTRLQPSFSFSCEALVLNGKSGAVKRMEIDSAEAISVSASVLAXXXXXXXXXXXXXXXXXXGPAEHDRVAHQRVHAGKSLRAETVRFFAEEGGPATARRFESVAALMSAGGFSGAGYLSDVVVRKVDAPSLAAPGTVPDPGCH--RGSRPANSRLPPPPRPGADPTLTMYLGDPDEVGPARGA--ARSAGVGGGVLRVTVGGGARRDLLGCIPEELLVPPAGGHTGADAVADAGRTVAKSLLDGLEVGGGRGERVDVVLACSAAVDANERVVSGGTRYRLVSLQPNYFS 494
            V  SSFRGTVQA +TR TSFRVVWRGDAFTTPQ+APSTTML QG   P        RS      LSQ  +L+VSRE ACALAAWAK E+PSVTS E  RG                + A  AG                      DAA RPGSLG+VR GVETTVRACV+E SEVERLW+W+ AGGKRRKDLVSRATALLTDG H+MTLQLWGDMASD TI SLR   I A +    ARDGAM++PAVFEFTRLQPSFSFSCEALVLNGKSG    M+  SAEA+        XXXXXXXXXXXXXXXXXX        A        S  A+        G PA+ARRFESVAALMSA GFSGAGYL++VV+RKV AP L+A G    PG H    S P+   + PP        + +Y GDPDE  PA  A  ARSAGV   VL VT  GGA  +LLG +P +LL   +G  +      D GR V + LLDGLEVGG RGERVDV LACSA+ D N R++ GG+ YRL+SL P Y S
Sbjct:  167 VGVSSFRGTVQACSTRSTSFRVVWRGDAFTTPQEAPSTTMLPQGRPPPASE-----RS-----ALSQGGDLSVSREAACALAAWAKTEFPSVTSPEPPRGXXXXXXXXXXXQDLWNRHATAAGVLPSVEEAEGAXXXXXXXXXXXDAAFRPGSLGAVRNGVETTVRACVVEVSEVERLWIWKYAGGKRRKDLVSRATALLTDGRHEMTLQLWGDMASDETIDSLRGRVITAGKNGVSARDGAMERPAVFEFTRLQPSFSFSCEALVLNGKSGTATHMDRGSAEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSCA-----GAPSFLAQGA------GAPASARRFESVAALMSADGFSGAGYLANVVIRKVCAPWLSAAGP---PGEHGRTASLPSLGSVAPP--------VVIYFGDPDEPVPAAAAGDARSAGVEA-VLGVTADGGALHELLGGVPLDLLAVGSGSSSRGGMAGDVGRRVVQCLLDGLEVGGRRGERVDVALACSASADENGRLIPGGSSYRLISLLPRYES 672          
BLAST of mRNA_L-elsbetiae_contig4814.12699.1 vs. uniprot
Match: A0A6H5KGT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT9_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 2.740e-137
Identity = 292/534 (54.68%), Postives = 334/534 (62.55%), Query Frame = 0
Query:    4 SSFRGTVQASTTRDTSFRVVWRGDAFTTPQDAPSTTMLSQGWSSPKGRGGGRRRSHHPGPVLSQDDELAVSREEACALAAWAKREYPSVTSAE-----------------------------RRGQQAATAGESDAA-----RPGSLGSVREGVETTVRACVLEASEVERLWLWESAGGKRRKDLVSRATALLTDGLHDMTLQLWGDMASDNTIQSLREGSIAAARG---ARDGAMKQPAVFEFTRLQPSFSFSCEALVLNGKSGAVKRMEIDSAEAISVSASVLAXXXXXXXXXXXXXXXXXXGPAEHDRVAHQRVHAGKSLRAETVRFFAE-EGGPATARRFESVAALMSAGGFSGAGYLSDVVVRKVDAPSLAAPGTVPDPGCHRGSRPANSRLPPPPRPGADPTLTMYLGDPDEVGPARGAAR-------SAGVGGGVLRVTVGGGARRDLLGCIPEELLVPPAGGHTGADAVADAGRTVAKSLLDGLEVGGGRGERVDVVLACSAAVDANERVVSGGTRYRLVSLQPNY 492
            SSF+GTVQA +TR TSFRVVWRGDAFTTPQ+APSTTML  G   P        RS      LSQ  +LAVSRE ACALAAWAK E+PS+TS E                               G   A +G++ AA     RPGSLG+ R GV TTVRACV+E SEVERLW+WESAGGKRRKDLVSRATALLTDG H+MTLQLWGDMASD TI SLR  +IAA +    A D  M++PAVFEFTRLQPSFSFSCE LVLNGKSG V +M+  SAEA+S       XXXXXXXXXX             D  A   +   KS  A +  F A+  G PA+ARRFESVAALMSA GFSGAGYL +VVVRKV AP L+A G+ PD      S P+   + PP        + +YLGD DE  PA  AA        SAGV   V+ VT  GGA  +LLG +P +LL   +G  +      D GR V + LLDGLEVGG RGERVDV LACSA+ D N R + GG+ YRL+SL P Y
Sbjct:  171 SSFQGTVQACSTRKTSFRVVWRGDAFTTPQEAPSTTMLPLGRPPPASE-----RS-----PLSQGGDLAVSREAACALAAWAKTEFPSITSPEPPRGXXXXXXXQHLCNRHAAAPGVSPLMEEEGGVGADSGDAAAAGDAAFRPGSLGAARNGVGTTVRACVVEVSEVERLWMWESAGGKRRKDLVSRATALLTDGRHEMTLQLWGDMASDETIDSLRGRAIAAGKNDVSAHDRTMERPAVFEFTRLQPSFSFSCETLVLNGKSGTVTQMDRGSAEAVSXXXXXXXXXXXXXXXXX-------------DERAPVSLATAKSSCAGSPSFLAQGAGAPASARRFESVAALMSADGFSGAGYLDNVVVRKVCAPWLSAAGS-PDEHGRAASLPSLGGVAPP--------VVIYLGDLDEPVPAAAAAAAGTCDAWSAGVEA-VVGVTADGGALHELLGGVPLDLLAVGSGRGSRRGMAGDVGRGVVQCLLDGLEVGGRRGERVDVALACSASADENGRFIPGGSSYRLISLLPKY 671          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4814.12699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRL8_ECTSI2.990e-13956.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGT9_9PHAE2.740e-13754.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4814contigL-elsbetiae_contig4814:11305..13344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4814.12699.1mRNA_L-elsbetiae_contig4814.12699.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4814 11305..13344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4814.12699.1 ID=prot_L-elsbetiae_contig4814.12699.1|Name=mRNA_L-elsbetiae_contig4814.12699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=494bp
VTASSFRGTVQASTTRDTSFRVVWRGDAFTTPQDAPSTTMLSQGWSSPKG
RGGGRRRSHHPGPVLSQDDELAVSREEACALAAWAKREYPSVTSAERRGQ
QAATAGESDAARPGSLGSVREGVETTVRACVLEASEVERLWLWESAGGKR
RKDLVSRATALLTDGLHDMTLQLWGDMASDNTIQSLREGSIAAARGARDG
AMKQPAVFEFTRLQPSFSFSCEALVLNGKSGAVKRMEIDSAEAISVSASV
LAAAAAAAAAVTPAAAAAAAGPAEHDRVAHQRVHAGKSLRAETVRFFAEE
GGPATARRFESVAALMSAGGFSGAGYLSDVVVRKVDAPSLAAPGTVPDPG
CHRGSRPANSRLPPPPRPGADPTLTMYLGDPDEVGPARGAARSAGVGGGV
LRVTVGGGARRDLLGCIPEELLVPPAGGHTGADAVADAGRTVAKSLLDGL
EVGGGRGERVDVVLACSAAVDANERVVSGGTRYRLVSLQPNYFS
back to top