prot_L-elsbetiae_contig2015.6060.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2015.6060.1
Unique Nameprot_L-elsbetiae_contig2015.6060.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
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BLAST of mRNA_L-elsbetiae_contig2015.6060.1 vs. uniprot
Match: D8LTM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM4_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 7.360e-61
Identity = 111/152 (73.03%), Postives = 123/152 (80.92%), Query Frame = 0 
Query:    1 MVGAAMGILTLVGHATDALLNAVGLAVLLYGRRKPLQGTMCRLVKRLCLASLAMAGWLLGMTVIGFLVAVKGPIGAAAVAFYSD-LSLRCRSSVSVSVDYAYAMTTLTILCQFFIGIVALP--TLSSLRSRSRGRCCKWRCCQCCRLVNPVG 149
            MVGA MGILT+VG+ATD LLNAVGLAVLLYGRRKPLQ   CR+VKRLCLASLAMAGWLLG T+IGFL+AVKGPIGAAAVAFYS+   L C +SVSVSVDYAYAM TLT+LCQFFIGIVALP  + SS ++R R  CC+W         NP G
Sbjct:   70 MVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRMVKRLCLASLAMAGWLLGTTIIGFLIAVKGPIGAAAVAFYSEEFDLDCGNSVSVSVDYAYAMATLTVLCQFFIGIVALPKPSRSSPQNRRRRFCCRW---------NPAG 212
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BLAST of mRNA_L-elsbetiae_contig2015.6060.1 vs. uniprot
Match: A0A6H5JU38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU38_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 2.350e-52
Identity = 106/153 (69.28%), Postives = 118/153 (77.12%), Query Frame = 0 
Query:    1 MVGAAMGILTLVGHATDALLNAVGLAVLLYGRRKPLQGTMCRLVKRLCLASLAMAGWLLGMTVIGFLVAVKGPIGAAAVAFYSD-LSLRCRSSVSVSVDYAYAMTTLTILCQFFIGIVALP--TLSSLRSRSRGR-CCKWRCCQCCRLVNPVG 149
            MVGA MGILT+VG+ATD LLNAVGLAVLLYGRRKPLQ   CR+VKRLCLASLAMAGWL+GMTVIGFL+AVKGPIGAAAVAFYS+   L C +SVSV       M TLT+LCQFFIGIVALP  + SS ++R R R CC+W         NP G
Sbjct:  273 MVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRMVKRLCLASLAMAGWLMGMTVIGFLIAVKGPIGAAAVAFYSEEFDLDCGNSVSVXXXXXXXMATLTVLCQFFIGIVALPKPSRSSPQNRRRRRFCCRW---------NPAG 416
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2015.6060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTM4_ECTSI7.360e-6173.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU38_9PHAE2.350e-5269.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2015contigL-elsbetiae_contig2015:2974..4520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2015.6060.1mRNA_L-elsbetiae_contig2015.6060.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2015 2974..6001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2015.6060.1 ID=prot_L-elsbetiae_contig2015.6060.1|Name=mRNA_L-elsbetiae_contig2015.6060.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
MVGAAMGILTLVGHATDALLNAVGLAVLLYGRRKPLQGTMCRLVKRLCLA
SLAMAGWLLGMTVIGFLVAVKGPIGAAAVAFYSDLSLRCRSSVSVSVDYA
YAMTTLTILCQFFIGIVALPTLSSLRSRSRGRCCKWRCCQCCRLVNPVGC
CCFFLRRGMSCCFPSPSSSSSASHPFHGEPPC
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