prot_L-elsbetiae_contig20103.6044.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20103.6044.1
Unique Nameprot_L-elsbetiae_contig20103.6044.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length223
Homology
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BLAST of mRNA_L-elsbetiae_contig20103.6044.1 vs. uniprot
Match: D7FH87_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH87_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.540e-58
Identity = 114/188 (60.64%), Postives = 134/188 (71.28%), Query Frame = 0 
Query:   36 SVCRDGFSALYNAVVESHPAVAADMLQALERRDEERGTVFPYSGESCVAKAFFGGDRRRMTLVQGAAYGLEAKSLSKLLSMGALDPFSMKGGDGRAAEYVDLVTPGDAGMPPKDPVLKAAMHRMIARRPAFTATSWLWPRVPGV-LGGGTVRAGAGAAAGGRPRPRVSVFRPGQGRSRNVRIWKALRR 222
            +VC  G S LYNAVVES+ ++A +ML+ LER+DEE GTV+P S  S V K  F  DRR MTLV GA YGLE KSLSKLLSMGALDPF+ +GGD RAA Y++LVTP DAG+PPKDPVLKA M RMIARR AFTATSWLWP V      GG  +A AG   G  P   V+  RP + R R + +++A RR
Sbjct:  258 TVCSKGASPLYNAVVESNSSIAVEMLKTLERKDEEEGTVYP-SRASRVGKGLFRSDRRFMTLVNGAVYGLEFKSLSKLLSMGALDPFADEGGDERAAAYIELVTPADAGLPPKDPVLKACMRRMIARRVAFTATSWLWPLVLSAGKSGGEGKANAGRRRGMAP-VGVARCRPERRRHRQLELFRAFRR 443
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20103.6044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH87_ECTSI1.540e-5860.64Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..157
e-value: 6.3E-9
score: 37.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 8..107
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 7..62
score: 11.612

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20103contigL-elsbetiae_contig20103:170..2082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20103.6044.1mRNA_L-elsbetiae_contig20103.6044.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20103 170..2082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20103.6044.1 ID=prot_L-elsbetiae_contig20103.6044.1|Name=mRNA_L-elsbetiae_contig20103.6044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
PSYTGPSDIAPLYLAAKEGHREAARELVRAGGDPLSVCRDGFSALYNAVV
ESHPAVAADMLQALERRDEERGTVFPYSGESCVAKAFFGGDRRRMTLVQG
AAYGLEAKSLSKLLSMGALDPFSMKGGDGRAAEYVDLVTPGDAGMPPKDP
VLKAAMHRMIARRPAFTATSWLWPRVPGVLGGGTVRAGAGAAAGGRPRPR
VSVFRPGQGRSRNVRIWKALRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom